EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000005778 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 7930 bases
Position: chrKL654026.1:27976-35905
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004486	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008267	-	861	-	ENSCVAP00000004486	286 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000005778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005778's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000005778	-	67	30.846	ENSCVAG00000009937	-	56	30.846
ENSCVAG00000005778	-	68	36.000	ENSCVAG00000018769	-	85	36.000
ENSCVAG00000005778	-	67	33.846	ENSCVAG00000005487	-	68	32.609
ENSCVAG00000005778	-	69	35.176	ENSCVAG00000018876	-	90	35.176
ENSCVAG00000005778	-	76	32.420	ENSCVAG00000007827	-	80	32.420
ENSCVAG00000005778	-	67	30.846	ENSCVAG00000005709	-	56	30.846
ENSCVAG00000005778	-	79	32.759	ENSCVAG00000010232	-	82	33.190
ENSCVAG00000005778	-	55	32.727	ENSCVAG00000009848	-	79	32.727
ENSCVAG00000005778	-	74	32.227	ENSCVAG00000000740	-	67	30.830
ENSCVAG00000005778	-	71	36.000	ENSCVAG00000018802	-	83	36.634
ENSCVAG00000005778	-	69	36.364	ENSCVAG00000001617	-	81	36.364
ENSCVAG00000005778	-	65	30.612	ENSCVAG00000015817	-	61	30.769
ENSCVAG00000005778	-	71	61.463	ENSCVAG00000012268	-	67	61.463
ENSCVAG00000005778	-	68	32.995	ENSCVAG00000009854	-	60	33.508
ENSCVAG00000005778	-	66	33.679	ENSCVAG00000014872	-	80	33.679
ENSCVAG00000005778	-	68	33.503	ENSCVAG00000004881	-	61	33.047
ENSCVAG00000005778	-	79	32.900	ENSCVAG00000002876	-	74	32.900
ENSCVAG00000005778	-	68	31.633	ENSCVAG00000021672	-	94	31.633
ENSCVAG00000005778	-	67	33.000	ENSCVAG00000009825	-	70	33.000
ENSCVAG00000005778	-	68	38.916	ENSCVAG00000009387	-	59	38.916
ENSCVAG00000005778	-	81	31.330	ENSCVAG00000003302	-	86	31.330
ENSCVAG00000005778	-	80	35.345	ENSCVAG00000003300	-	65	35.345
ENSCVAG00000005778	-	69	37.363	ENSCVAG00000011321	-	89	37.634
ENSCVAG00000005778	-	63	31.522	ENSCVAG00000016807	-	83	31.522
ENSCVAG00000005778	-	68	33.838	ENSCVAG00000007737	-	87	33.838
ENSCVAG00000005778	-	57	34.146	ENSCVAG00000019639	-	81	34.146
ENSCVAG00000005778	-	70	34.951	ENSCVAG00000021126	-	72	34.951
ENSCVAG00000005778	-	80	34.043	ENSCVAG00000005473	-	82	34.043
ENSCVAG00000005778	-	70	35.176	ENSCVAG00000000429	-	63	35.176
ENSCVAG00000005778	-	69	36.683	ENSCVAG00000023285	-	79	36.683
ENSCVAG00000005778	-	71	33.010	ENSCVAG00000018798	-	68	33.816
ENSCVAG00000005778	-	77	33.182	ENSCVAG00000007454	-	86	33.182
ENSCVAG00000005778	-	80	34.052	ENSCVAG00000023434	-	81	34.052
ENSCVAG00000005778	-	88	32.540	ENSCVAG00000010264	-	68	33.333
ENSCVAG00000005778	-	70	32.843	ENSCVAG00000003277	-	93	32.843
ENSCVAG00000005778	-	63	36.216	ENSCVAG00000013717	-	83	36.216
ENSCVAG00000005778	-	78	37.333	ENSCVAG00000003054	-	75	37.333
ENSCVAG00000005778	-	70	33.168	ENSCVAG00000017209	-	62	33.929
ENSCVAG00000005778	-	67	31.818	ENSCVAG00000009808	-	82	31.818
ENSCVAG00000005778	-	81	31.197	ENSCVAG00000005762	-	74	31.197
ENSCVAG00000005778	-	67	32.653	ENSCVAG00000004346	-	81	32.653
ENSCVAG00000005778	-	68	31.313	ENSCVAG00000009295	-	81	31.313
ENSCVAG00000005778	-	69	36.139	ENSCVAG00000018895	-	91	36.139

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005778	-	83	36.207	ENSAPOG00000019154	-	55	35.106	Acanthochromis_polyacanthus
ENSCVAG00000005778	-	72	37.681	ENSACIG00000007725	-	75	37.681	Amphilophus_citrinellus
ENSCVAG00000005778	-	74	36.792	ENSACIG00000009811	-	87	36.792	Amphilophus_citrinellus
ENSCVAG00000005778	-	63	35.912	ENSACIG00000007737	-	73	34.375	Amphilophus_citrinellus
ENSCVAG00000005778	-	88	43.085	ENSAOCG00000004579	-	79	43.646	Amphiprion_ocellaris
ENSCVAG00000005778	-	90	31.395	ENSAOCG00000003425	-	95	31.395	Amphiprion_ocellaris
ENSCVAG00000005778	-	81	41.711	ENSAPEG00000014403	-	71	41.711	Amphiprion_percula
ENSCVAG00000005778	-	93	39.796	ENSAPEG00000001491	-	71	39.796	Amphiprion_percula
ENSCVAG00000005778	-	67	39.896	ENSATEG00000023053	-	83	39.896	Anabas_testudineus
ENSCVAG00000005778	-	83	41.026	ENSATEG00000015654	-	80	37.295	Anabas_testudineus
ENSCVAG00000005778	-	88	39.894	ENSACLG00000014795	-	77	39.894	Astatotilapia_calliptera
ENSCVAG00000005778	-	63	35.106	ENSAMXG00000026085	-	88	32.669	Astyanax_mexicanus
ENSCVAG00000005778	-	81	35.678	ENSAMXG00000006064	-	82	35.678	Astyanax_mexicanus
ENSCVAG00000005778	-	78	42.632	ENSAMXG00000030744	-	81	42.632	Astyanax_mexicanus
ENSCVAG00000005778	-	84	36.548	ENSAMXG00000021387	-	71	36.548	Astyanax_mexicanus
ENSCVAG00000005778	-	66	34.872	ENSAMXG00000009216	-	93	34.872	Astyanax_mexicanus
ENSCVAG00000005778	-	69	43.299	ENSAMXG00000019109	-	85	43.299	Astyanax_mexicanus
ENSCVAG00000005778	-	81	36.250	ENSAMXG00000033117	-	83	36.364	Astyanax_mexicanus
ENSCVAG00000005778	-	90	38.251	ENSCSEG00000021519	-	77	42.593	Cynoglossus_semilaevis
ENSCVAG00000005778	-	66	37.500	ENSDARG00000102683	CR626941.1	71	37.500	Danio_rerio
ENSCVAG00000005778	-	78	40.000	ENSDARG00000063481	si:ch211-214j24.15	63	40.000	Danio_rerio
ENSCVAG00000005778	-	67	35.385	ENSELUG00000018709	-	69	34.167	Esox_lucius
ENSCVAG00000005778	-	69	31.553	ENSELUG00000003217	-	83	31.553	Esox_lucius
ENSCVAG00000005778	-	71	42.927	ENSELUG00000018192	-	95	42.927	Esox_lucius
ENSCVAG00000005778	-	74	43.662	ENSELUG00000024502	-	77	43.868	Esox_lucius
ENSCVAG00000005778	-	64	40.541	ENSFHEG00000023334	-	71	40.541	Fundulus_heteroclitus
ENSCVAG00000005778	-	81	35.955	ENSFHEG00000020783	-	89	35.955	Fundulus_heteroclitus
ENSCVAG00000005778	-	66	37.755	ENSGMOG00000001626	-	100	38.043	Gadus_morhua
ENSCVAG00000005778	-	82	35.638	ENSGAFG00000020826	-	93	35.638	Gambusia_affinis
ENSCVAG00000005778	-	68	37.234	ENSHBUG00000008326	-	91	37.234	Haplochromis_burtoni
ENSCVAG00000005778	-	67	42.487	ENSHBUG00000016284	-	88	42.487	Haplochromis_burtoni
ENSCVAG00000005778	-	75	34.762	ENSHBUG00000001242	-	59	34.762	Haplochromis_burtoni
ENSCVAG00000005778	-	66	35.751	ENSIPUG00000013342	-	77	33.197	Ictalurus_punctatus
ENSCVAG00000005778	-	72	40.291	ENSKMAG00000009600	-	71	40.291	Kryptolebias_marmoratus
ENSCVAG00000005778	-	80	38.798	ENSKMAG00000014764	-	87	38.798	Kryptolebias_marmoratus
ENSCVAG00000005778	-	67	39.691	ENSKMAG00000014605	-	62	39.691	Kryptolebias_marmoratus
ENSCVAG00000005778	-	84	41.969	ENSKMAG00000004774	-	71	41.969	Kryptolebias_marmoratus
ENSCVAG00000005778	-	81	37.083	ENSLBEG00000019652	-	82	37.083	Labrus_bergylta
ENSCVAG00000005778	-	84	37.255	ENSLOCG00000016496	-	72	37.255	Lepisosteus_oculatus
ENSCVAG00000005778	-	65	44.324	ENSLOCG00000017852	-	68	44.324	Lepisosteus_oculatus
ENSCVAG00000005778	-	72	41.951	ENSLOCG00000000517	-	88	35.689	Lepisosteus_oculatus
ENSCVAG00000005778	-	68	43.590	ENSLOCG00000000082	-	92	39.841	Lepisosteus_oculatus
ENSCVAG00000005778	-	69	41.327	ENSLOCG00000000385	-	91	36.201	Lepisosteus_oculatus
ENSCVAG00000005778	-	69	40.404	ENSLOCG00000012075	-	89	40.909	Lepisosteus_oculatus
ENSCVAG00000005778	-	68	44.103	ENSLOCG00000018072	-	90	41.048	Lepisosteus_oculatus
ENSCVAG00000005778	-	66	38.095	ENSMAMG00000021970	-	81	38.095	Mastacembelus_armatus
ENSCVAG00000005778	-	68	40.838	ENSMAMG00000021969	-	54	40.838	Mastacembelus_armatus
ENSCVAG00000005778	-	78	43.939	ENSMAMG00000015600	-	73	40.957	Mastacembelus_armatus
ENSCVAG00000005778	-	66	41.538	ENSMMOG00000012876	-	58	41.538	Mola_mola
ENSCVAG00000005778	-	63	32.044	ENSMMOG00000016864	-	70	32.275	Mola_mola
ENSCVAG00000005778	-	73	38.208	ENSNBRG00000002136	-	72	38.208	Neolamprologus_brichardi
ENSCVAG00000005778	-	83	35.060	ENSORLG00000028011	-	55	35.060	Oryzias_latipes
ENSCVAG00000005778	-	80	40.933	ENSORLG00000002031	-	65	40.933	Oryzias_latipes
ENSCVAG00000005778	-	67	38.144	ENSORLG00000002537	-	57	38.144	Oryzias_latipes
ENSCVAG00000005778	-	80	41.146	ENSORLG00020008286	-	84	41.146	Oryzias_latipes_hni
ENSCVAG00000005778	-	83	39.691	ENSORLG00020011284	-	75	39.691	Oryzias_latipes_hni
ENSCVAG00000005778	-	80	40.104	ENSORLG00020008323	-	64	40.104	Oryzias_latipes_hni
ENSCVAG00000005778	-	80	41.146	ENSORLG00015004522	-	63	41.146	Oryzias_latipes_hsok
ENSCVAG00000005778	-	61	32.571	ENSORLG00015023234	-	88	32.571	Oryzias_latipes_hsok
ENSCVAG00000005778	-	82	38.660	ENSORLG00015004110	-	64	38.660	Oryzias_latipes_hsok
ENSCVAG00000005778	-	80	39.801	ENSOMEG00000010594	-	85	40.394	Oryzias_melastigma
ENSCVAG00000005778	-	78	37.436	ENSOMEG00000020433	-	81	37.436	Oryzias_melastigma
ENSCVAG00000005778	-	67	46.392	ENSPKIG00000017688	-	67	46.392	Paramormyrops_kingsleyae
ENSCVAG00000005778	-	69	45.729	ENSPKIG00000017193	-	84	45.729	Paramormyrops_kingsleyae
ENSCVAG00000005778	-	69	35.961	ENSPMGG00000017993	-	79	35.961	Periophthalmus_magnuspinnatus
ENSCVAG00000005778	-	66	36.508	ENSPMGG00000014056	-	72	36.508	Periophthalmus_magnuspinnatus
ENSCVAG00000005778	-	72	35.407	ENSPMGG00000014055	-	80	35.407	Periophthalmus_magnuspinnatus
ENSCVAG00000005778	-	75	64.179	ENSPFOG00000022853	-	93	64.179	Poecilia_formosa
ENSCVAG00000005778	-	68	55.612	ENSPFOG00000015871	-	78	55.612	Poecilia_formosa
ENSCVAG00000005778	-	92	55.288	ENSPFOG00000015875	-	85	55.288	Poecilia_formosa
ENSCVAG00000005778	-	82	38.624	ENSPFOG00000016787	-	87	38.624	Poecilia_formosa
ENSCVAG00000005778	-	88	54.872	ENSPFOG00000012732	-	78	54.872	Poecilia_formosa
ENSCVAG00000005778	-	71	39.623	ENSPFOG00000005689	si:dkey-185m8.2	73	39.623	Poecilia_formosa
ENSCVAG00000005778	-	71	61.463	ENSPFOG00000022479	-	86	61.463	Poecilia_formosa
ENSCVAG00000005778	-	89	63.281	ENSPFOG00000000191	-	75	63.281	Poecilia_formosa
ENSCVAG00000005778	-	92	52.427	ENSPFOG00000013109	-	97	54.113	Poecilia_formosa
ENSCVAG00000005778	-	81	34.171	ENSPFOG00000006124	-	92	34.171	Poecilia_formosa
ENSCVAG00000005778	-	94	55.825	ENSPFOG00000013349	-	84	55.825	Poecilia_formosa
ENSCVAG00000005778	-	78	54.412	ENSPFOG00000015865	-	94	54.412	Poecilia_formosa
ENSCVAG00000005778	-	79	33.186	ENSPLAG00000018606	-	82	33.186	Poecilia_latipinna
ENSCVAG00000005778	-	86	62.903	ENSPLAG00000018664	-	90	62.903	Poecilia_latipinna
ENSCVAG00000005778	-	84	48.148	ENSPLAG00000003020	-	86	48.148	Poecilia_latipinna
ENSCVAG00000005778	-	62	35.393	ENSPLAG00000018911	-	65	35.393	Poecilia_latipinna
ENSCVAG00000005778	-	68	56.701	ENSPLAG00000020776	-	84	56.701	Poecilia_latipinna
ENSCVAG00000005778	-	79	58.242	ENSPLAG00000018692	-	97	58.242	Poecilia_latipinna
ENSCVAG00000005778	-	73	49.048	ENSPMEG00000020252	-	93	49.048	Poecilia_mexicana
ENSCVAG00000005778	-	62	34.831	ENSPMEG00000018950	-	65	34.831	Poecilia_mexicana
ENSCVAG00000005778	-	87	59.489	ENSPMEG00000000724	-	74	59.489	Poecilia_mexicana
ENSCVAG00000005778	-	96	59.489	ENSPMEG00000006334	-	86	59.489	Poecilia_mexicana
ENSCVAG00000005778	-	65	55.319	ENSPMEG00000020297	-	67	55.319	Poecilia_mexicana
ENSCVAG00000005778	-	86	58.776	ENSPMEG00000010605	-	85	58.776	Poecilia_mexicana
ENSCVAG00000005778	-	95	52.558	ENSPMEG00000005912	-	80	52.558	Poecilia_mexicana
ENSCVAG00000005778	-	79	42.188	ENSPMEG00000000604	-	69	42.188	Poecilia_mexicana
ENSCVAG00000005778	-	86	38.095	ENSPREG00000020440	-	74	38.095	Poecilia_reticulata
ENSCVAG00000005778	-	92	51.908	ENSPREG00000001530	-	85	51.908	Poecilia_reticulata
ENSCVAG00000005778	-	69	57.071	ENSPREG00000001250	-	78	57.071	Poecilia_reticulata
ENSCVAG00000005778	-	78	36.726	ENSPNYG00000010004	-	77	36.726	Pundamilia_nyererei
ENSCVAG00000005778	-	80	39.062	ENSPNAG00000013132	-	71	39.062	Pygocentrus_nattereri
ENSCVAG00000005778	-	81	45.536	ENSPNAG00000014932	-	68	45.536	Pygocentrus_nattereri
ENSCVAG00000005778	-	65	33.862	ENSPNAG00000025850	-	68	33.846	Pygocentrus_nattereri
ENSCVAG00000005778	-	66	44.211	ENSPNAG00000002097	-	75	44.211	Pygocentrus_nattereri
ENSCVAG00000005778	-	70	38.308	ENSPNAG00000019899	-	80	38.308	Pygocentrus_nattereri
ENSCVAG00000005778	-	74	33.188	ENSSFOG00015002503	-	84	33.188	Scleropages_formosus
ENSCVAG00000005778	-	64	36.413	ENSSFOG00015002507	-	70	36.413	Scleropages_formosus
ENSCVAG00000005778	-	64	37.297	ENSSFOG00015002420	-	69	37.297	Scleropages_formosus
ENSCVAG00000005778	-	87	36.910	ENSSMAG00000012187	-	60	38.542	Scophthalmus_maximus
ENSCVAG00000005778	-	66	39.683	ENSSDUG00000022299	-	71	39.683	Seriola_dumerili
ENSCVAG00000005778	-	67	41.053	ENSSLDG00000005786	-	57	41.053	Seriola_lalandi_dorsalis
ENSCVAG00000005778	-	83	39.583	ENSSLDG00000010531	-	94	37.190	Seriola_lalandi_dorsalis
ENSCVAG00000005778	-	73	47.436	ENSSLDG00000009168	-	96	39.844	Seriola_lalandi_dorsalis
ENSCVAG00000005778	-	65	43.085	ENSSPAG00000015927	-	75	43.085	Stegastes_partitus
ENSCVAG00000005778	-	98	33.654	ENSSPAG00000017616	-	86	33.654	Stegastes_partitus
ENSCVAG00000005778	-	80	38.696	ENSTRUG00000018070	-	78	37.712	Takifugu_rubripes
ENSCVAG00000005778	-	84	35.656	ENSTRUG00000020422	-	79	35.656	Takifugu_rubripes
ENSCVAG00000005778	-	81	38.793	ENSTNIG00000004275	-	93	38.793	Tetraodon_nigroviridis
ENSCVAG00000005778	-	65	47.312	ENSTNIG00000004220	-	76	47.312	Tetraodon_nigroviridis
ENSCVAG00000005778	-	71	40.580	ENSXCOG00000009005	-	78	40.580	Xiphophorus_couchianus
ENSCVAG00000005778	-	65	54.787	ENSXCOG00000018421	-	81	54.787	Xiphophorus_couchianus
ENSCVAG00000005778	-	89	55.340	ENSXMAG00000023360	-	84	55.340	Xiphophorus_maculatus