EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000005783 (Gene tree)
Gene ID: 107093462
Gene Symbol: arl13a
Alias: zgc:73398
Full Name: ADP ribosylation factor like GTPase 13A
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 7996 bases
Position: chrKL652519.1:155609-163604
Accession: 107093462
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004477	MMR_HSR1	PF01926.23	9.2e-06	1	1
ENSCVAP00000022836	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008280	-	1200	-	ENSCVAP00000004477	399 (aa)	-	-
ENSCVAT00000008296	-	1986	XM_015388517	ENSCVAP00000022836	443 (aa)	XP_015244003	UPI000742B529

Gene Model

Click here to download ENSCVAG00000005783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005783's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000005783	arl13a	54	48.848	ENSCVAG00000001545	arl13b	91	47.210

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005783	arl13a	99	76.768	ENSACIG00000012235	arl13a	99	79.469	Amphilophus_citrinellus
ENSCVAG00000005783	arl13a	93	76.683	ENSAOCG00000024309	arl13a	96	78.177	Amphiprion_ocellaris
ENSCVAG00000005783	arl13a	99	80.272	ENSAPEG00000006626	arl13a	99	81.448	Amphiprion_percula
ENSCVAG00000005783	arl13a	99	79.505	ENSATEG00000018113	arl13a	99	80.405	Anabas_testudineus
ENSCVAG00000005783	arl13a	99	78.680	ENSACLG00000000738	arl13a	99	79.442	Astatotilapia_calliptera
ENSCVAG00000005783	arl13a	93	59.472	ENSAMXG00000021495	arl13a	98	58.950	Astyanax_mexicanus
ENSCVAG00000005783	arl13a	55	49.327	ENSCPBG00000014304	ARL13A	84	50.000	Chrysemys_picta_bellii
ENSCVAG00000005783	arl13a	62	33.692	ENSCGRG00001021947	Arl13a	73	33.692	Cricetulus_griseus_chok1gshd
ENSCVAG00000005783	arl13a	62	33.692	ENSCGRG00000007297	Arl13a	73	33.692	Cricetulus_griseus_crigri
ENSCVAG00000005783	arl13a	99	57.895	ENSCSEG00000002533	arl13a	99	61.520	Cynoglossus_semilaevis
ENSCVAG00000005783	arl13a	99	68.027	ENSDARG00000052575	arl13a	99	69.161	Danio_rerio
ENSCVAG00000005783	arl13a	100	89.391	ENSFHEG00000017023	arl13a	100	89.391	Fundulus_heteroclitus
ENSCVAG00000005783	arl13a	100	88.262	ENSGAFG00000019994	arl13a	100	88.262	Gambusia_affinis
ENSCVAG00000005783	arl13a	99	69.880	ENSGACG00000017318	arl13a	99	73.430	Gasterosteus_aculeatus
ENSCVAG00000005783	arl13a	99	82.500	ENSHBUG00000016100	arl13a	99	82.955	Haplochromis_burtoni
ENSCVAG00000005783	arl13a	99	65.060	ENSHCOG00000005206	arl13a	99	70.433	Hippocampus_comes
ENSCVAG00000005783	arl13a	99	59.601	ENSIPUG00000017720	arl13a	99	60.577	Ictalurus_punctatus
ENSCVAG00000005783	arl13a	99	77.878	ENSKMAG00000001139	arl13a	99	77.878	Kryptolebias_marmoratus
ENSCVAG00000005783	arl13a	99	76.364	ENSLBEG00000028724	arl13a	99	77.273	Labrus_bergylta
ENSCVAG00000005783	arl13a	99	54.709	ENSLOCG00000015307	arl13a	99	54.955	Lepisosteus_oculatus
ENSCVAG00000005783	arl13a	99	69.617	ENSMAMG00000020385	arl13a	99	74.584	Mastacembelus_armatus
ENSCVAG00000005783	arl13a	99	82.500	ENSMZEG00005007052	arl13a	99	82.955	Maylandia_zebra
ENSCVAG00000005783	arl13a	62	33.929	ENSMAUG00000001355	-	70	33.929	Mesocricetus_auratus
ENSCVAG00000005783	arl13a	62	33.929	ENSMAUG00000010729	-	70	33.929	Mesocricetus_auratus
ENSCVAG00000005783	arl13a	98	70.202	ENSMMOG00000000880	arl13a	99	69.830	Mola_mola
ENSCVAG00000005783	arl13a	93	65.783	ENSMALG00000009029	arl13a	99	70.202	Monopterus_albus
ENSCVAG00000005783	arl13a	50	40.196	MGP_CAROLIEiJ_G0033386	Arl13a	53	40.196	Mus_caroli
ENSCVAG00000005783	arl13a	50	42.157	ENSMUSG00000052549	Arl13a	54	42.157	Mus_musculus
ENSCVAG00000005783	arl13a	50	41.667	MGP_PahariEiJ_G0031926	Arl13a	53	41.667	Mus_pahari
ENSCVAG00000005783	arl13a	50	42.157	MGP_SPRETEiJ_G0034551	Arl13a	53	42.157	Mus_spretus
ENSCVAG00000005783	arl13a	99	78.841	ENSNBRG00000021766	arl13a	99	79.040	Neolamprologus_brichardi
ENSCVAG00000005783	arl13a	93	81.535	ENSONIG00000002645	arl13a	100	81.731	Oreochromis_niloticus
ENSCVAG00000005783	arl13a	99	78.330	ENSORLG00000001425	arl13a	99	78.555	Oryzias_latipes
ENSCVAG00000005783	arl13a	99	78.182	ENSORLG00020021844	arl13a	99	78.555	Oryzias_latipes_hni
ENSCVAG00000005783	arl13a	99	78.555	ENSORLG00015011862	arl13a	99	78.781	Oryzias_latipes_hsok
ENSCVAG00000005783	arl13a	99	76.818	ENSOMEG00000015603	arl13a	99	78.104	Oryzias_melastigma
ENSCVAG00000005783	arl13a	99	55.924	ENSPKIG00000013558	arl13a	98	57.176	Paramormyrops_kingsleyae
ENSCVAG00000005783	arl13a	55	51.584	ENSPSIG00000003515	ARL13A	98	51.584	Pelodiscus_sinensis
ENSCVAG00000005783	arl13a	99	62.779	ENSPMGG00000017973	arl13a	99	65.301	Periophthalmus_magnuspinnatus
ENSCVAG00000005783	arl13a	100	87.585	ENSPFOG00000016707	arl13a	100	87.359	Poecilia_formosa
ENSCVAG00000005783	arl13a	99	83.503	ENSPLAG00000011307	arl13a	99	83.503	Poecilia_latipinna
ENSCVAG00000005783	arl13a	100	89.165	ENSPMEG00000017855	arl13a	100	89.165	Poecilia_mexicana
ENSCVAG00000005783	arl13a	100	88.036	ENSPREG00000011435	arl13a	100	88.036	Poecilia_reticulata
ENSCVAG00000005783	arl13a	99	78.426	ENSPNYG00000011485	arl13a	99	79.188	Pundamilia_nyererei
ENSCVAG00000005783	arl13a	50	41.176	ENSRNOG00000055454	Arl13a	51	41.176	Rattus_norvegicus
ENSCVAG00000005783	arl13a	93	60.482	ENSSFOG00015010065	arl13a	99	61.928	Scleropages_formosus
ENSCVAG00000005783	arl13a	99	71.014	ENSSMAG00000013557	arl13a	99	74.940	Scophthalmus_maximus
ENSCVAG00000005783	arl13a	99	68.537	ENSSDUG00000000933	arl13a	99	75.253	Seriola_dumerili
ENSCVAG00000005783	arl13a	99	79.186	ENSSLDG00000009973	arl13a	99	80.317	Seriola_lalandi_dorsalis
ENSCVAG00000005783	arl13a	87	80.829	ENSSPAG00000009109	arl13a	95	82.292	Stegastes_partitus
ENSCVAG00000005783	arl13a	99	84.653	ENSXCOG00000016270	arl13a	99	84.653	Xiphophorus_couchianus
ENSCVAG00000005783	arl13a	100	89.391	ENSXMAG00000013485	arl13a	100	89.391	Xiphophorus_maculatus