EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000005906 (Gene tree)
Gene ID: -
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 5992 bases
Position: chrKL653099.1:106992-112983
Accession: 107096120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000022907	dsrm	PF00035.26	8.3e-35	1	3
ENSCVAP00000022907	dsrm	PF00035.26	8.3e-35	2	3
ENSCVAP00000022907	dsrm	PF00035.26	8.3e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008110	-	1683	XM_015392627	ENSCVAP00000022907	560 (aa)	XP_015248113	-

Gene Model

Click here to download ENSCVAG00000005906's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005906's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000005906	stau1	87	43.126	ENSCVAG00000009893	stau2	73	43.605

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005906	stau1	99	69.497	ENSG00000124214	STAU1	99	72.414	Homo_sapiens
ENSCVAG00000005906	stau1	100	82.739	ENSAPOG00000017260	stau1	96	81.426	Acanthochromis_polyacanthus
ENSCVAG00000005906	stau1	99	70.363	ENSAMEG00000013681	STAU1	95	69.732	Ailuropoda_melanoleuca
ENSCVAG00000005906	stau1	100	86.720	ENSACIG00000015918	stau1	93	86.720	Amphilophus_citrinellus
ENSCVAG00000005906	stau1	100	83.490	ENSAOCG00000012224	stau1	96	82.176	Amphiprion_ocellaris
ENSCVAG00000005906	stau1	100	83.677	ENSAPEG00000012308	stau1	96	82.364	Amphiprion_percula
ENSCVAG00000005906	stau1	100	80.216	ENSATEG00000024600	stau1	100	78.957	Anabas_testudineus
ENSCVAG00000005906	stau1	99	71.751	ENSAPLG00000010527	STAU1	94	71.078	Anas_platyrhynchos
ENSCVAG00000005906	stau1	89	73.047	ENSACAG00000015909	STAU1	95	69.646	Anolis_carolinensis
ENSCVAG00000005906	stau1	99	68.611	ENSANAG00000032714	STAU1	99	68.852	Aotus_nancymaae
ENSCVAG00000005906	stau1	100	84.418	ENSACLG00000012270	stau1	96	83.037	Astatotilapia_calliptera
ENSCVAG00000005906	stau1	100	75.887	ENSAMXG00000016812	stau1	98	75.177	Astyanax_mexicanus
ENSCVAG00000005906	stau1	99	68.804	ENSBTAG00000000241	STAU1	99	68.229	Bos_taurus
ENSCVAG00000005906	stau1	99	69.324	ENSCJAG00000016233	STAU1	99	68.750	Callithrix_jacchus
ENSCVAG00000005906	stau1	99	68.856	ENSCAFG00000011347	STAU1	98	68.233	Canis_familiaris
ENSCVAG00000005906	stau1	99	68.856	ENSCAFG00020017123	STAU1	98	68.233	Canis_lupus_dingo
ENSCVAG00000005906	stau1	99	68.631	ENSCHIG00000001799	-	99	68.056	Capra_hircus
ENSCVAG00000005906	stau1	99	68.111	ENSTSYG00000036179	-	99	67.535	Carlito_syrichta
ENSCVAG00000005906	stau1	87	72.211	ENSCAPG00000017041	STAU1	99	72.008	Cavia_aperea
ENSCVAG00000005906	stau1	86	70.183	ENSCPOG00000005566	STAU1	99	69.512	Cavia_porcellus
ENSCVAG00000005906	stau1	99	68.611	ENSCCAG00000034339	STAU1	99	68.041	Cebus_capucinus
ENSCVAG00000005906	stau1	99	69.497	ENSCATG00000028474	STAU1	99	71.543	Cercocebus_atys
ENSCVAG00000005906	stau1	87	59.394	ENSCLAG00000002784	-	99	58.824	Chinchilla_lanigera
ENSCVAG00000005906	stau1	86	72.617	ENSCLAG00000006516	-	99	71.951	Chinchilla_lanigera
ENSCVAG00000005906	stau1	87	73.077	ENSCSAG00000014986	STAU1	99	72.414	Chlorocebus_sabaeus
ENSCVAG00000005906	stau1	99	69.204	ENSCHOG00000001511	STAU1	99	68.631	Choloepus_hoffmanni
ENSCVAG00000005906	stau1	99	71.887	ENSCPBG00000026741	STAU1	96	70.019	Chrysemys_picta_bellii
ENSCVAG00000005906	stau1	99	69.671	ENSCANG00000039220	STAU1	99	69.097	Colobus_angolensis_palliatus
ENSCVAG00000005906	stau1	86	68.560	ENSCGRG00001013453	Stau1	99	67.886	Cricetulus_griseus_chok1gshd
ENSCVAG00000005906	stau1	86	68.560	ENSCGRG00000007216	Stau1	99	67.886	Cricetulus_griseus_crigri
ENSCVAG00000005906	stau1	100	73.396	ENSCSEG00000000792	stau1	96	73.396	Cynoglossus_semilaevis
ENSCVAG00000005906	stau1	100	76.953	ENSDARG00000044182	stau1	94	75.586	Danio_rerio
ENSCVAG00000005906	stau1	99	69.377	ENSDNOG00000014933	STAU1	97	68.631	Dasypus_novemcinctus
ENSCVAG00000005906	stau1	86	71.458	ENSDORG00000030220	Stau1	99	70.782	Dipodomys_ordii
ENSCVAG00000005906	stau1	87	73.826	ENSETEG00000018235	STAU1	87	73.826	Echinops_telfairi
ENSCVAG00000005906	stau1	99	72.332	ENSEASG00005023343	STAU1	99	69.508	Equus_asinus_asinus
ENSCVAG00000005906	stau1	99	70.937	ENSECAG00000012894	STAU1	98	70.307	Equus_caballus
ENSCVAG00000005906	stau1	68	76.154	ENSEEUG00000014344	STAU1	68	76.154	Erinaceus_europaeus
ENSCVAG00000005906	stau1	99	79.223	ENSELUG00000002529	stau1	92	77.864	Esox_lucius
ENSCVAG00000005906	stau1	99	70.132	ENSFCAG00000001447	STAU1	98	69.508	Felis_catus
ENSCVAG00000005906	stau1	99	72.190	ENSFALG00000012940	STAU1	96	71.456	Ficedula_albicollis
ENSCVAG00000005906	stau1	86	56.082	ENSFDAG00000020837	-	98	54.959	Fukomys_damarensis
ENSCVAG00000005906	stau1	86	72.211	ENSFDAG00000014119	-	99	71.545	Fukomys_damarensis
ENSCVAG00000005906	stau1	100	88.694	ENSFHEG00000013517	stau1	100	88.482	Fundulus_heteroclitus
ENSCVAG00000005906	stau1	100	69.656	ENSGMOG00000016850	stau1	93	68.321	Gadus_morhua
ENSCVAG00000005906	stau1	99	72.762	ENSGALG00000004736	STAU1	96	72.222	Gallus_gallus
ENSCVAG00000005906	stau1	100	88.281	ENSGAFG00000010437	stau1	93	86.914	Gambusia_affinis
ENSCVAG00000005906	stau1	99	85.375	ENSGACG00000001352	stau1	93	84.585	Gasterosteus_aculeatus
ENSCVAG00000005906	stau1	99	72.710	ENSGAGG00000009825	STAU1	96	72.414	Gopherus_agassizii
ENSCVAG00000005906	stau1	99	64.615	ENSGGOG00000025351	STAU1	99	75.833	Gorilla_gorilla
ENSCVAG00000005906	stau1	100	84.418	ENSHBUG00000023668	stau1	96	83.037	Haplochromis_burtoni
ENSCVAG00000005906	stau1	86	73.717	ENSHGLG00000008730	STAU1	99	73.045	Heterocephalus_glaber_female
ENSCVAG00000005906	stau1	86	73.717	ENSHGLG00100000098	STAU1	99	73.045	Heterocephalus_glaber_male
ENSCVAG00000005906	stau1	100	81.076	ENSHCOG00000018461	stau1	92	80.279	Hippocampus_comes
ENSCVAG00000005906	stau1	96	76.289	ENSIPUG00000023725	stau1	93	75.052	Ictalurus_punctatus
ENSCVAG00000005906	stau1	86	72.485	ENSSTOG00000003634	STAU1	99	71.811	Ictidomys_tridecemlineatus
ENSCVAG00000005906	stau1	86	71.253	ENSJJAG00000020032	Stau1	99	70.576	Jaculus_jaculus
ENSCVAG00000005906	stau1	99	84.462	ENSKMAG00000007135	stau1	93	84.462	Kryptolebias_marmoratus
ENSCVAG00000005906	stau1	99	83.432	ENSLBEG00000020172	stau1	93	82.213	Labrus_bergylta
ENSCVAG00000005906	stau1	99	74.951	ENSLACG00000016157	STAU1	95	74.901	Latimeria_chalumnae
ENSCVAG00000005906	stau1	99	76.832	ENSLOCG00000003134	stau1	96	72.414	Lepisosteus_oculatus
ENSCVAG00000005906	stau1	89	72.727	ENSLAFG00000003238	STAU1	99	72.079	Loxodonta_africana
ENSCVAG00000005906	stau1	99	69.497	ENSMFAG00000040931	STAU1	98	74.812	Macaca_fascicularis
ENSCVAG00000005906	stau1	99	64.615	ENSMMUG00000002302	STAU1	98	74.812	Macaca_mulatta
ENSCVAG00000005906	stau1	99	69.497	ENSMNEG00000033821	STAU1	99	71.543	Macaca_nemestrina
ENSCVAG00000005906	stau1	99	69.497	ENSMLEG00000031383	STAU1	99	68.924	Mandrillus_leucophaeus
ENSCVAG00000005906	stau1	100	85.853	ENSMAMG00000017586	stau1	98	84.496	Mastacembelus_armatus
ENSCVAG00000005906	stau1	100	83.237	ENSMZEG00005015605	stau1	96	79.851	Maylandia_zebra
ENSCVAG00000005906	stau1	99	71.940	ENSMGAG00000004719	STAU1	94	71.267	Meleagris_gallopavo
ENSCVAG00000005906	stau1	86	68.763	ENSMAUG00000013846	Stau1	99	68.089	Mesocricetus_auratus
ENSCVAG00000005906	stau1	99	68.096	ENSMICG00000001995	STAU1	99	67.526	Microcebus_murinus
ENSCVAG00000005906	stau1	86	69.168	ENSMOCG00000018743	Stau1	99	68.496	Microtus_ochrogaster
ENSCVAG00000005906	stau1	96	81.092	ENSMMOG00000015455	stau1	99	84.082	Mola_mola
ENSCVAG00000005906	stau1	99	71.429	ENSMODG00000016276	STAU1	99	70.802	Monodelphis_domestica
ENSCVAG00000005906	stau1	100	84.690	ENSMALG00000000045	stau1	96	81.238	Monopterus_albus
ENSCVAG00000005906	stau1	86	69.405	MGP_CAROLIEiJ_G0024699	Stau1	99	68.724	Mus_caroli
ENSCVAG00000005906	stau1	86	69.405	ENSMUSG00000039536	Stau1	99	68.724	Mus_musculus
ENSCVAG00000005906	stau1	86	68.994	MGP_PahariEiJ_G0026141	Stau1	99	68.313	Mus_pahari
ENSCVAG00000005906	stau1	86	69.405	MGP_SPRETEiJ_G0025619	Stau1	99	68.724	Mus_spretus
ENSCVAG00000005906	stau1	99	69.981	ENSMPUG00000017581	STAU1	98	69.349	Mustela_putorius_furo
ENSCVAG00000005906	stau1	99	67.826	ENSMLUG00000008407	STAU1	97	67.247	Myotis_lucifugus
ENSCVAG00000005906	stau1	86	70.994	ENSNGAG00000007108	Stau1	99	70.325	Nannospalax_galili
ENSCVAG00000005906	stau1	100	84.418	ENSNBRG00000017596	stau1	96	83.037	Neolamprologus_brichardi
ENSCVAG00000005906	stau1	99	69.497	ENSNLEG00000006955	STAU1	99	71.543	Nomascus_leucogenys
ENSCVAG00000005906	stau1	93	75.599	ENSMEUG00000003263	STAU1	78	75.664	Notamacropus_eugenii
ENSCVAG00000005906	stau1	95	67.766	ENSOPRG00000014569	STAU1	95	67.156	Ochotona_princeps
ENSCVAG00000005906	stau1	87	72.470	ENSODEG00000006523	STAU1	99	71.805	Octodon_degus
ENSCVAG00000005906	stau1	100	84.221	ENSONIG00000004152	stau1	95	82.840	Oreochromis_niloticus
ENSCVAG00000005906	stau1	99	70.501	ENSOANG00000006394	STAU1	96	69.517	Ornithorhynchus_anatinus
ENSCVAG00000005906	stau1	99	68.870	ENSOCUG00000006214	STAU1	99	68.293	Oryctolagus_cuniculus
ENSCVAG00000005906	stau1	100	78.652	ENSOMEG00000002388	stau1	96	77.715	Oryzias_melastigma
ENSCVAG00000005906	stau1	99	68.631	ENSOGAG00000002127	STAU1	97	68.056	Otolemur_garnettii
ENSCVAG00000005906	stau1	86	51.215	ENSOGAG00000028222	-	98	50.000	Otolemur_garnettii
ENSCVAG00000005906	stau1	99	70.363	ENSOARG00000012204	STAU1	98	69.732	Ovis_aries
ENSCVAG00000005906	stau1	99	64.615	ENSPPAG00000032023	STAU1	99	75.833	Pan_paniscus
ENSCVAG00000005906	stau1	99	69.043	ENSPPRG00000003436	STAU1	99	72.211	Panthera_pardus
ENSCVAG00000005906	stau1	99	69.043	ENSPTIG00000011768	STAU1	99	71.343	Panthera_tigris_altaica
ENSCVAG00000005906	stau1	99	64.615	ENSPTRG00000023130	STAU1	99	75.833	Pan_troglodytes
ENSCVAG00000005906	stau1	99	69.497	ENSPANG00000020560	STAU1	99	68.924	Papio_anubis
ENSCVAG00000005906	stau1	100	76.877	ENSPKIG00000024588	stau1	93	76.877	Paramormyrops_kingsleyae
ENSCVAG00000005906	stau1	99	73.092	ENSPSIG00000010731	STAU1	95	71.186	Pelodiscus_sinensis
ENSCVAG00000005906	stau1	99	81.836	ENSPMGG00000018553	stau1	100	81.520	Periophthalmus_magnuspinnatus
ENSCVAG00000005906	stau1	86	69.371	ENSPEMG00000022045	Stau1	99	68.699	Peromyscus_maniculatus_bairdii
ENSCVAG00000005906	stau1	98	72.978	ENSPCIG00000023269	STAU1	99	70.476	Phascolarctos_cinereus
ENSCVAG00000005906	stau1	100	87.500	ENSPFOG00000017253	stau1	93	86.719	Poecilia_formosa
ENSCVAG00000005906	stau1	64	78.830	ENSPLAG00000014829	stau1	88	76.323	Poecilia_latipinna
ENSCVAG00000005906	stau1	95	86.392	ENSPMEG00000007495	stau1	91	85.155	Poecilia_mexicana
ENSCVAG00000005906	stau1	100	87.109	ENSPREG00000003477	stau1	93	86.328	Poecilia_reticulata
ENSCVAG00000005906	stau1	99	69.151	ENSPPYG00000011111	STAU1	99	68.576	Pongo_abelii
ENSCVAG00000005906	stau1	95	62.842	ENSPCAG00000002459	STAU1	100	62.226	Procavia_capensis
ENSCVAG00000005906	stau1	99	68.631	ENSPCOG00000027746	STAU1	99	70.541	Propithecus_coquereli
ENSCVAG00000005906	stau1	86	75.839	ENSPVAG00000015019	STAU1	86	75.839	Pteropus_vampyrus
ENSCVAG00000005906	stau1	100	84.418	ENSPNYG00000014436	stau1	96	83.037	Pundamilia_nyererei
ENSCVAG00000005906	stau1	100	74.951	ENSPNAG00000011323	stau1	94	73.398	Pygocentrus_nattereri
ENSCVAG00000005906	stau1	86	68.357	ENSRNOG00000007781	Stau1	99	67.683	Rattus_norvegicus
ENSCVAG00000005906	stau1	87	72.636	ENSRBIG00000037345	STAU1	99	71.774	Rhinopithecus_bieti
ENSCVAG00000005906	stau1	99	69.497	ENSRROG00000039008	STAU1	99	71.774	Rhinopithecus_roxellana
ENSCVAG00000005906	stau1	99	68.611	ENSSBOG00000034448	STAU1	99	70.492	Saimiri_boliviensis_boliviensis
ENSCVAG00000005906	stau1	99	71.619	ENSSHAG00000009492	STAU1	99	70.992	Sarcophilus_harrisii
ENSCVAG00000005906	stau1	100	78.330	ENSSFOG00015021497	stau1	99	72.156	Scleropages_formosus
ENSCVAG00000005906	stau1	100	82.331	ENSSMAG00000017410	stau1	96	81.015	Scophthalmus_maximus
ENSCVAG00000005906	stau1	100	84.053	ENSSDUG00000019439	stau1	96	82.739	Seriola_dumerili
ENSCVAG00000005906	stau1	100	84.053	ENSSLDG00000025040	stau1	96	82.739	Seriola_lalandi_dorsalis
ENSCVAG00000005906	stau1	62	74.000	ENSSARG00000010389	-	62	74.000	Sorex_araneus
ENSCVAG00000005906	stau1	99	71.887	ENSSPUG00000017983	STAU1	99	71.402	Sphenodon_punctatus
ENSCVAG00000005906	stau1	100	83.490	ENSSPAG00000019275	stau1	96	82.176	Stegastes_partitus
ENSCVAG00000005906	stau1	99	72.332	ENSSSCG00000027444	STAU1	99	72.211	Sus_scrofa
ENSCVAG00000005906	stau1	99	71.429	ENSTGUG00000008784	STAU1	94	69.517	Taeniopygia_guttata
ENSCVAG00000005906	stau1	100	79.310	ENSTRUG00000005837	stau1	96	79.310	Takifugu_rubripes
ENSCVAG00000005906	stau1	96	80.038	ENSTNIG00000014732	stau1	95	78.868	Tetraodon_nigroviridis
ENSCVAG00000005906	stau1	99	59.792	ENSTBEG00000009404	STAU1	99	59.375	Tupaia_belangeri
ENSCVAG00000005906	stau1	81	71.895	ENSTTRG00000004285	STAU1	78	71.903	Tursiops_truncatus
ENSCVAG00000005906	stau1	87	71.200	ENSUAMG00000025449	STAU1	99	70.541	Ursus_americanus
ENSCVAG00000005906	stau1	66	68.421	ENSUMAG00000024475	STAU1	89	67.546	Ursus_maritimus
ENSCVAG00000005906	stau1	99	69.151	ENSVPAG00000001313	STAU1	99	68.576	Vicugna_pacos
ENSCVAG00000005906	stau1	99	68.856	ENSVVUG00000022325	STAU1	98	68.233	Vulpes_vulpes
ENSCVAG00000005906	stau1	89	70.472	ENSXETG00000001783	stau1	72	69.625	Xenopus_tropicalis
ENSCVAG00000005906	stau1	59	79.880	ENSXCOG00000008804	stau1	82	78.679	Xiphophorus_couchianus
ENSCVAG00000005906	stau1	100	87.500	ENSXMAG00000016175	stau1	93	86.133	Xiphophorus_maculatus