EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000005940 (Gene tree)
Gene ID: 107094499
Gene Symbol: nop53
Alias: fb60b03|gltscr2|wu:fb60b03|zgc:123178
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 12044 bases
Position: chrKL652986.1:625692-637735
Accession: 107094499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004630	Nop53	PF07767.11	1.6e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008030	-	1621	XM_015390124	ENSCVAP00000004630	467 (aa)	XP_015245610	-

Gene Model

Click here to download ENSCVAG00000005940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005940's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005940	nop53	97	47.761	ENSG00000105373	NOP53	99	71.429	Homo_sapiens
ENSCVAG00000005940	nop53	100	79.915	ENSAPOG00000006446	nop53	100	78.632	Acanthochromis_polyacanthus
ENSCVAG00000005940	nop53	97	44.835	ENSAMEG00000015214	NOP53	88	45.372	Ailuropoda_melanoleuca
ENSCVAG00000005940	nop53	74	74.709	ENSACIG00000002467	nop53	98	74.203	Amphilophus_citrinellus
ENSCVAG00000005940	nop53	100	78.587	ENSAOCG00000007002	nop53	100	77.302	Amphiprion_ocellaris
ENSCVAG00000005940	nop53	100	79.443	ENSAPEG00000024564	nop53	100	78.158	Amphiprion_percula
ENSCVAG00000005940	nop53	96	75.893	ENSATEG00000021860	nop53	100	74.330	Anabas_testudineus
ENSCVAG00000005940	nop53	58	54.804	ENSACAG00000011362	-	95	54.122	Anolis_carolinensis
ENSCVAG00000005940	nop53	97	43.683	ENSANAG00000007933	NOP53	93	45.093	Aotus_nancymaae
ENSCVAG00000005940	nop53	100	76.068	ENSACLG00000011832	nop53	100	76.068	Astatotilapia_calliptera
ENSCVAG00000005940	nop53	97	62.309	ENSAMXG00000014883	nop53	99	62.633	Astyanax_mexicanus
ENSCVAG00000005940	nop53	97	47.269	ENSBTAG00000021192	NOP53	79	48.046	Bos_taurus
ENSCVAG00000005940	nop53	97	48.203	ENSCJAG00000011385	NOP53	88	49.306	Callithrix_jacchus
ENSCVAG00000005940	nop53	97	46.764	ENSCAFG00000004080	NOP53	88	47.032	Canis_familiaris
ENSCVAG00000005940	nop53	97	47.458	ENSCHIG00000009393	NOP53	88	48.260	Capra_hircus
ENSCVAG00000005940	nop53	97	43.432	ENSTSYG00000036631	NOP53	78	56.190	Carlito_syrichta
ENSCVAG00000005940	nop53	84	46.731	ENSCAPG00000013148	NOP53	99	46.731	Cavia_aperea
ENSCVAG00000005940	nop53	97	46.862	ENSCPOG00000015665	NOP53	88	47.826	Cavia_porcellus
ENSCVAG00000005940	nop53	97	48.188	ENSCCAG00000025477	NOP53	87	49.306	Cebus_capucinus
ENSCVAG00000005940	nop53	97	47.548	ENSCATG00000032842	NOP53	87	48.598	Cercocebus_atys
ENSCVAG00000005940	nop53	99	46.266	ENSCLAG00000001860	NOP53	98	45.549	Chinchilla_lanigera
ENSCVAG00000005940	nop53	97	47.548	ENSCSAG00000002928	NOP53	87	48.598	Chlorocebus_sabaeus
ENSCVAG00000005940	nop53	85	50.244	ENSCPBG00000009047	NOP53	94	50.244	Chrysemys_picta_bellii
ENSCVAG00000005940	nop53	89	34.884	ENSCING00000021395	-	96	34.023	Ciona_intestinalis
ENSCVAG00000005940	nop53	89	33.871	ENSCSAVG00000006009	-	95	33.486	Ciona_savignyi
ENSCVAG00000005940	nop53	97	46.022	ENSCANG00000039648	NOP53	86	47.494	Colobus_angolensis_palliatus
ENSCVAG00000005940	nop53	97	47.034	ENSCGRG00001019033	Nop53	95	46.269	Cricetulus_griseus_chok1gshd
ENSCVAG00000005940	nop53	99	66.304	ENSCSEG00000014834	nop53	98	66.304	Cynoglossus_semilaevis
ENSCVAG00000005940	nop53	99	65.885	ENSDARG00000100452	nop53	99	65.032	Danio_rerio
ENSCVAG00000005940	nop53	98	47.170	ENSDNOG00000005165	NOP53	79	48.956	Dasypus_novemcinctus
ENSCVAG00000005940	nop53	57	45.714	ENSDORG00000016339	-	79	47.699	Dipodomys_ordii
ENSCVAG00000005940	nop53	94	42.377	ENSEBUG00000012747	nop53	90	41.958	Eptatretus_burgeri
ENSCVAG00000005940	nop53	97	47.447	ENSEASG00005004345	NOP53	84	47.368	Equus_asinus_asinus
ENSCVAG00000005940	nop53	97	46.737	ENSECAG00000026850	NOP53	84	47.696	Equus_caballus
ENSCVAG00000005940	nop53	99	42.739	ENSEEUG00000005287	NOP53	73	76.562	Erinaceus_europaeus
ENSCVAG00000005940	nop53	100	66.880	ENSELUG00000001525	nop53	100	67.094	Esox_lucius
ENSCVAG00000005940	nop53	97	46.170	ENSFCAG00000010861	NOP53	88	46.606	Felis_catus
ENSCVAG00000005940	nop53	97	42.888	ENSFDAG00000010478	NOP53	86	42.080	Fukomys_damarensis
ENSCVAG00000005940	nop53	100	87.580	ENSFHEG00000017763	nop53	97	86.296	Fundulus_heteroclitus
ENSCVAG00000005940	nop53	100	63.404	ENSGMOG00000014299	nop53	100	63.191	Gadus_morhua
ENSCVAG00000005940	nop53	97	46.570	ENSGALG00000039473	NOP53	70	49.091	Gallus_gallus
ENSCVAG00000005940	nop53	100	85.011	ENSGAFG00000013301	nop53	99	84.582	Gambusia_affinis
ENSCVAG00000005940	nop53	100	66.880	ENSGACG00000005766	nop53	100	66.880	Gasterosteus_aculeatus
ENSCVAG00000005940	nop53	97	44.586	ENSGGOG00000024728	-	87	45.305	Gorilla_gorilla
ENSCVAG00000005940	nop53	97	46.368	ENSGGOG00000005462	NOP53	87	47.307	Gorilla_gorilla
ENSCVAG00000005940	nop53	100	76.496	ENSHBUG00000023625	nop53	100	76.496	Haplochromis_burtoni
ENSCVAG00000005940	nop53	97	46.921	ENSHGLG00000018240	NOP53	88	47.564	Heterocephalus_glaber_female
ENSCVAG00000005940	nop53	75	61.062	ENSHGLG00100015613	NOP53	80	62.264	Heterocephalus_glaber_male
ENSCVAG00000005940	nop53	100	71.369	ENSHCOG00000017133	nop53	100	71.162	Hippocampus_comes
ENSCVAG00000005940	nop53	99	64.668	ENSIPUG00000008154	nop53	88	64.882	Ictalurus_punctatus
ENSCVAG00000005940	nop53	99	46.998	ENSSTOG00000022092	NOP53	87	47.307	Ictidomys_tridecemlineatus
ENSCVAG00000005940	nop53	97	47.134	ENSJJAG00000007854	Nop53	88	48.837	Jaculus_jaculus
ENSCVAG00000005940	nop53	96	82.366	ENSKMAG00000020756	nop53	100	81.920	Kryptolebias_marmoratus
ENSCVAG00000005940	nop53	100	73.448	ENSLBEG00000011432	nop53	100	73.876	Labrus_bergylta
ENSCVAG00000005940	nop53	85	52.826	ENSLACG00000018320	NOP53	99	52.826	Latimeria_chalumnae
ENSCVAG00000005940	nop53	100	59.402	ENSLOCG00000014178	nop53	100	59.188	Lepisosteus_oculatus
ENSCVAG00000005940	nop53	97	47.335	ENSMFAG00000045103	NOP53	87	48.843	Macaca_fascicularis
ENSCVAG00000005940	nop53	97	47.548	ENSMMUG00000013348	NOP53	99	71.429	Macaca_mulatta
ENSCVAG00000005940	nop53	97	47.548	ENSMNEG00000042540	NOP53	84	48.598	Macaca_nemestrina
ENSCVAG00000005940	nop53	97	42.094	ENSMLEG00000032475	NOP53	68	64.151	Mandrillus_leucophaeus
ENSCVAG00000005940	nop53	100	78.465	ENSMAMG00000012652	nop53	100	78.465	Mastacembelus_armatus
ENSCVAG00000005940	nop53	100	71.581	ENSMZEG00005005033	nop53	100	71.581	Maylandia_zebra
ENSCVAG00000005940	nop53	97	46.497	ENSMAUG00000012617	Nop53	87	47.674	Mesocricetus_auratus
ENSCVAG00000005940	nop53	91	47.085	ENSMICG00000005580	NOP53	92	47.368	Microcebus_murinus
ENSCVAG00000005940	nop53	97	46.895	ENSMOCG00000008367	Nop53	88	47.887	Microtus_ochrogaster
ENSCVAG00000005940	nop53	100	75.267	ENSMMOG00000006515	nop53	100	75.053	Mola_mola
ENSCVAG00000005940	nop53	99	46.218	ENSMODG00000008721	NOP53	92	46.203	Monodelphis_domestica
ENSCVAG00000005940	nop53	100	76.874	ENSMALG00000020350	nop53	96	78.205	Monopterus_albus
ENSCVAG00000005940	nop53	97	46.947	MGP_CAROLIEiJ_G0029218	Nop53	88	47.926	Mus_caroli
ENSCVAG00000005940	nop53	97	46.737	ENSMUSG00000041560	Nop53	88	47.696	Mus_musculus
ENSCVAG00000005940	nop53	86	46.635	MGP_PahariEiJ_G0021074	-	95	45.116	Mus_pahari
ENSCVAG00000005940	nop53	97	46.849	MGP_SPRETEiJ_G0030298	Nop53	88	47.816	Mus_spretus
ENSCVAG00000005940	nop53	97	46.316	ENSMPUG00000004456	NOP53	88	47.235	Mustela_putorius_furo
ENSCVAG00000005940	nop53	51	64.286	ENSMLUG00000027066	-	99	50.752	Myotis_lucifugus
ENSCVAG00000005940	nop53	97	47.527	ENSNGAG00000019894	Nop53	88	49.057	Nannospalax_galili
ENSCVAG00000005940	nop53	96	68.680	ENSNBRG00000002057	nop53	93	67.338	Neolamprologus_brichardi
ENSCVAG00000005940	nop53	99	47.934	ENSNLEG00000003143	NOP53	87	49.533	Nomascus_leucogenys
ENSCVAG00000005940	nop53	95	39.073	ENSNLEG00000028326	-	51	41.379	Nomascus_leucogenys
ENSCVAG00000005940	nop53	76	40.274	ENSMEUG00000002525	-	99	39.560	Notamacropus_eugenii
ENSCVAG00000005940	nop53	97	46.331	ENSODEG00000006707	NOP53	88	47.222	Octodon_degus
ENSCVAG00000005940	nop53	100	77.350	ENSONIG00000016624	nop53	100	75.855	Oreochromis_niloticus
ENSCVAG00000005940	nop53	100	71.795	ENSORLG00000008659	nop53	100	71.795	Oryzias_latipes
ENSCVAG00000005940	nop53	100	69.444	ENSORLG00020019916	nop53	97	69.444	Oryzias_latipes_hni
ENSCVAG00000005940	nop53	100	74.627	ENSORLG00015001315	nop53	100	74.414	Oryzias_latipes_hsok
ENSCVAG00000005940	nop53	98	76.790	ENSOMEG00000018244	nop53	100	76.221	Oryzias_melastigma
ENSCVAG00000005940	nop53	97	39.319	ENSOGAG00000024300	NOP53	89	42.626	Otolemur_garnettii
ENSCVAG00000005940	nop53	97	35.967	ENSOARG00000011414	NOP53	87	34.651	Ovis_aries
ENSCVAG00000005940	nop53	97	43.348	ENSPPAG00000029337	-	87	43.128	Pan_paniscus
ENSCVAG00000005940	nop53	97	46.908	ENSPPAG00000002927	-	87	47.897	Pan_paniscus
ENSCVAG00000005940	nop53	97	41.113	ENSPPAG00000032995	-	86	39.953	Pan_paniscus
ENSCVAG00000005940	nop53	97	45.963	ENSPPRG00000008954	NOP53	88	46.380	Panthera_pardus
ENSCVAG00000005940	nop53	97	43.348	ENSPTRG00000052493	-	87	43.128	Pan_troglodytes
ENSCVAG00000005940	nop53	97	48.401	ENSPTRG00000011215	NOP53	87	49.533	Pan_troglodytes
ENSCVAG00000005940	nop53	97	44.894	ENSPTRG00000043520	-	87	44.706	Pan_troglodytes
ENSCVAG00000005940	nop53	97	47.761	ENSPANG00000002964	NOP53	87	48.832	Papio_anubis
ENSCVAG00000005940	nop53	99	60.944	ENSPKIG00000000127	nop53	99	61.456	Paramormyrops_kingsleyae
ENSCVAG00000005940	nop53	100	73.150	ENSPMGG00000021579	nop53	100	71.277	Periophthalmus_magnuspinnatus
ENSCVAG00000005940	nop53	97	47.468	ENSPEMG00000006856	Nop53	88	48.499	Peromyscus_maniculatus_bairdii
ENSCVAG00000005940	nop53	50	41.176	ENSPMAG00000001501	-	88	43.096	Petromyzon_marinus
ENSCVAG00000005940	nop53	99	44.211	ENSPCIG00000016718	NOP53	88	46.445	Phascolarctos_cinereus
ENSCVAG00000005940	nop53	100	86.966	ENSPFOG00000002839	nop53	100	86.966	Poecilia_formosa
ENSCVAG00000005940	nop53	61	85.866	ENSPLAG00000009285	-	88	85.866	Poecilia_latipinna
ENSCVAG00000005940	nop53	100	86.966	ENSPLAG00000006675	nop53	100	86.966	Poecilia_latipinna
ENSCVAG00000005940	nop53	61	86.219	ENSPMEG00000006978	nop53	88	86.219	Poecilia_mexicana
ENSCVAG00000005940	nop53	100	87.580	ENSPMEG00000009589	nop53	100	87.580	Poecilia_mexicana
ENSCVAG00000005940	nop53	100	80.514	ENSPREG00000008711	nop53	100	77.944	Poecilia_reticulata
ENSCVAG00000005940	nop53	97	45.957	ENSPPYG00000010181	NOP53	87	46.154	Pongo_abelii
ENSCVAG00000005940	nop53	99	44.259	ENSPCAG00000007692	NOP53	99	43.487	Procavia_capensis
ENSCVAG00000005940	nop53	81	61.062	ENSPCOG00000016124	NOP53	79	62.264	Propithecus_coquereli
ENSCVAG00000005940	nop53	81	50.570	ENSPVAG00000014671	NOP53	72	49.430	Pteropus_vampyrus
ENSCVAG00000005940	nop53	100	76.709	ENSPNYG00000001341	nop53	100	76.709	Pundamilia_nyererei
ENSCVAG00000005940	nop53	99	64.882	ENSPNAG00000012520	nop53	99	64.882	Pygocentrus_nattereri
ENSCVAG00000005940	nop53	96	47.689	ENSRNOG00000013023	Nop53	88	47.973	Rattus_norvegicus
ENSCVAG00000005940	nop53	97	48.291	ENSRBIG00000036427	NOP53	87	50.000	Rhinopithecus_bieti
ENSCVAG00000005940	nop53	97	48.291	ENSRROG00000042298	NOP53	88	50.000	Rhinopithecus_roxellana
ENSCVAG00000005940	nop53	97	48.401	ENSSBOG00000033115	NOP53	87	49.533	Saimiri_boliviensis_boliviensis
ENSCVAG00000005940	nop53	85	46.929	ENSSHAG00000002239	NOP53	99	45.477	Sarcophilus_harrisii
ENSCVAG00000005940	nop53	100	62.260	ENSSFOG00015007062	gltscr2	100	62.473	Scleropages_formosus
ENSCVAG00000005940	nop53	100	73.191	ENSSMAG00000000212	nop53	100	73.404	Scophthalmus_maximus
ENSCVAG00000005940	nop53	100	76.445	ENSSDUG00000010575	nop53	100	75.375	Seriola_dumerili
ENSCVAG00000005940	nop53	100	74.518	ENSSLDG00000000140	nop53	97	74.518	Seriola_lalandi_dorsalis
ENSCVAG00000005940	nop53	72	48.116	ENSSARG00000014109	NOP53	72	48.116	Sorex_araneus
ENSCVAG00000005940	nop53	97	41.253	ENSSPUG00000004420	NOP53	80	46.499	Sphenodon_punctatus
ENSCVAG00000005940	nop53	100	79.443	ENSSPAG00000000318	nop53	100	79.443	Stegastes_partitus
ENSCVAG00000005940	nop53	97	46.121	ENSSSCG00000022774	NOP53	87	47.045	Sus_scrofa
ENSCVAG00000005940	nop53	100	74.946	ENSTRUG00000004944	nop53	100	74.732	Takifugu_rubripes
ENSCVAG00000005940	nop53	54	80.556	ENSTNIG00000014330	nop53	95	80.556	Tetraodon_nigroviridis
ENSCVAG00000005940	nop53	77	61.947	ENSTBEG00000008708	NOP53	63	62.264	Tupaia_belangeri
ENSCVAG00000005940	nop53	97	47.158	ENSTTRG00000011831	NOP53	88	47.926	Tursiops_truncatus
ENSCVAG00000005940	nop53	97	44.421	ENSUAMG00000028254	NOP53	88	45.161	Ursus_americanus
ENSCVAG00000005940	nop53	87	60.714	ENSXETG00000002782	nop53	91	49.061	Xenopus_tropicalis
ENSCVAG00000005940	nop53	100	83.940	ENSXCOG00000004436	nop53	100	83.512	Xiphophorus_couchianus
ENSCVAG00000005940	nop53	100	85.439	ENSXMAG00000002589	nop53	100	84.368	Xiphophorus_maculatus