EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000005949 (Gene tree)
Gene ID: 107100283
Gene Symbol: polrmt
Alias: si:dkey-21e2.1|si:dkeyp-74c5.5|wu:fb73g10
Full Name: RNA polymerase mitochondrial
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 72860 bases
Position: chrKL653454.1:127263-200122
Accession: 107100283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004586	RNA_pol	PF00940.19	8.8e-171	1	1
ENSCVAP00000004577	RNA_pol	PF00940.19	5e-161	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008091	-	6507	XM_015398712	ENSCVAP00000004586	1323 (aa)	XP_015254198	UPI000742C969
ENSCVAT00000008119	-	3576	-	ENSCVAP00000004577	1191 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000005949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005949's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005949	polrmt	98	46.378	ENSG00000099821	POLRMT	96	46.378	Homo_sapiens
ENSCVAG00000005949	polrmt	100	79.715	ENSAPOG00000003942	polrmt	100	79.715	Acanthochromis_polyacanthus
ENSCVAG00000005949	polrmt	98	46.122	ENSAMEG00000002745	POLRMT	96	46.040	Ailuropoda_melanoleuca
ENSCVAG00000005949	polrmt	93	82.923	ENSACIG00000016078	polrmt	97	82.923	Amphilophus_citrinellus
ENSCVAG00000005949	polrmt	100	79.940	ENSAOCG00000020208	polrmt	100	79.940	Amphiprion_ocellaris
ENSCVAG00000005949	polrmt	100	80.015	ENSAPEG00000007949	polrmt	100	80.015	Amphiprion_percula
ENSCVAG00000005949	polrmt	100	76.532	ENSATEG00000024025	polrmt	100	76.682	Anabas_testudineus
ENSCVAG00000005949	polrmt	84	58.754	ENSAPLG00000003051	POLRMT	99	58.761	Anas_platyrhynchos
ENSCVAG00000005949	polrmt	98	45.757	ENSANAG00000032916	POLRMT	96	45.823	Aotus_nancymaae
ENSCVAG00000005949	polrmt	99	86.860	ENSACLG00000003766	polrmt	100	81.409	Astatotilapia_calliptera
ENSCVAG00000005949	polrmt	99	63.298	ENSAMXG00000018258	polrmt	100	61.573	Astyanax_mexicanus
ENSCVAG00000005949	polrmt	99	47.780	ENSBTAG00000015051	POLRMT	99	45.695	Bos_taurus
ENSCVAG00000005949	polrmt	97	45.886	ENSCJAG00000012913	POLRMT	97	44.262	Callithrix_jacchus
ENSCVAG00000005949	polrmt	98	47.211	ENSCAFG00000019711	POLRMT	96	47.157	Canis_familiaris
ENSCVAG00000005949	polrmt	98	47.211	ENSCAFG00020016843	POLRMT	96	47.566	Canis_lupus_dingo
ENSCVAG00000005949	polrmt	99	47.980	ENSCHIG00000013267	POLRMT	96	47.238	Capra_hircus
ENSCVAG00000005949	polrmt	94	55.015	ENSCAPG00000016900	POLRMT	96	55.015	Cavia_aperea
ENSCVAG00000005949	polrmt	97	43.559	ENSCPOG00000023061	POLRMT	94	43.475	Cavia_porcellus
ENSCVAG00000005949	polrmt	98	45.297	ENSCCAG00000025014	POLRMT	96	45.424	Cebus_capucinus
ENSCVAG00000005949	polrmt	98	45.858	ENSCATG00000040393	POLRMT	96	45.700	Cercocebus_atys
ENSCVAG00000005949	polrmt	86	46.333	ENSCLAG00000007473	POLRMT	95	46.829	Chinchilla_lanigera
ENSCVAG00000005949	polrmt	98	45.167	ENSCSAG00000012942	POLRMT	96	45.088	Chlorocebus_sabaeus
ENSCVAG00000005949	polrmt	96	55.897	ENSCPBG00000009869	POLRMT	98	60.780	Chrysemys_picta_bellii
ENSCVAG00000005949	polrmt	63	45.052	ENSCSAVG00000000440	-	94	45.443	Ciona_savignyi
ENSCVAG00000005949	polrmt	98	45.784	ENSCANG00000038011	POLRMT	96	45.700	Colobus_angolensis_palliatus
ENSCVAG00000005949	polrmt	98	56.204	ENSCGRG00001021311	Polrmt	95	56.204	Cricetulus_griseus_chok1gshd
ENSCVAG00000005949	polrmt	98	47.262	ENSCGRG00000011134	Polrmt	96	47.337	Cricetulus_griseus_crigri
ENSCVAG00000005949	polrmt	100	62.360	ENSCSEG00000002734	polrmt	100	62.285	Cynoglossus_semilaevis
ENSCVAG00000005949	polrmt	99	64.638	ENSDARG00000101220	polrmt	100	60.999	Danio_rerio
ENSCVAG00000005949	polrmt	95	62.602	ENSDORG00000014125	Polrmt	96	62.602	Dipodomys_ordii
ENSCVAG00000005949	polrmt	84	43.536	FBgn0261938	mtRNApol	77	43.446	Drosophila_melanogaster
ENSCVAG00000005949	polrmt	97	44.833	ENSETEG00000003476	POLRMT	95	44.583	Echinops_telfairi
ENSCVAG00000005949	polrmt	76	52.678	ENSEBUG00000013453	-	99	52.575	Eptatretus_burgeri
ENSCVAG00000005949	polrmt	99	47.243	ENSEASG00005021493	POLRMT	96	47.325	Equus_asinus_asinus
ENSCVAG00000005949	polrmt	99	47.229	ENSECAG00000032711	POLRMT	96	47.243	Equus_caballus
ENSCVAG00000005949	polrmt	100	66.225	ENSELUG00000019319	polrmt	100	66.299	Esox_lucius
ENSCVAG00000005949	polrmt	98	46.589	ENSFCAG00000018808	POLRMT	96	47.094	Felis_catus
ENSCVAG00000005949	polrmt	86	52.101	ENSFALG00000013910	POLRMT	98	52.647	Ficedula_albicollis
ENSCVAG00000005949	polrmt	99	42.454	ENSFDAG00000020312	POLRMT	99	42.379	Fukomys_damarensis
ENSCVAG00000005949	polrmt	99	88.868	ENSFHEG00000021239	polrmt	99	87.767	Fundulus_heteroclitus
ENSCVAG00000005949	polrmt	96	70.043	ENSGMOG00000011829	polrmt	99	69.957	Gadus_morhua
ENSCVAG00000005949	polrmt	99	53.186	ENSGALG00000001377	POLRMT	99	52.767	Gallus_gallus
ENSCVAG00000005949	polrmt	100	86.124	ENSGAFG00000003953	polrmt	100	86.124	Gambusia_affinis
ENSCVAG00000005949	polrmt	96	76.792	ENSGACG00000012957	polrmt	99	76.877	Gasterosteus_aculeatus
ENSCVAG00000005949	polrmt	94	60.622	ENSGAGG00000005522	POLRMT	100	63.654	Gopherus_agassizii
ENSCVAG00000005949	polrmt	84	68.224	ENSGGOG00000023264	-	96	68.224	Gorilla_gorilla
ENSCVAG00000005949	polrmt	99	86.570	ENSHBUG00000010005	polrmt	100	81.034	Haplochromis_burtoni
ENSCVAG00000005949	polrmt	99	42.973	ENSHGLG00000019286	POLRMT	99	43.321	Heterocephalus_glaber_female
ENSCVAG00000005949	polrmt	99	43.993	ENSHGLG00100005762	POLRMT	99	42.652	Heterocephalus_glaber_male
ENSCVAG00000005949	polrmt	97	74.488	ENSHCOG00000001565	polrmt	95	74.215	Hippocampus_comes
ENSCVAG00000005949	polrmt	100	65.090	ENSIPUG00000000789	polrmt	100	65.997	Ictalurus_punctatus
ENSCVAG00000005949	polrmt	92	63.590	ENSSTOG00000003431	POLRMT	95	64.555	Ictidomys_tridecemlineatus
ENSCVAG00000005949	polrmt	95	58.671	ENSJJAG00000012916	Polrmt	96	58.671	Jaculus_jaculus
ENSCVAG00000005949	polrmt	99	77.650	ENSKMAG00000004426	polrmt	100	74.529	Kryptolebias_marmoratus
ENSCVAG00000005949	polrmt	100	77.038	ENSLBEG00000016529	polrmt	100	77.936	Labrus_bergylta
ENSCVAG00000005949	polrmt	98	61.952	ENSLACG00000011518	POLRMT	99	61.704	Latimeria_chalumnae
ENSCVAG00000005949	polrmt	100	58.197	ENSLOCG00000005222	polrmt	100	58.197	Lepisosteus_oculatus
ENSCVAG00000005949	polrmt	99	47.103	ENSLAFG00000001860	POLRMT	96	47.298	Loxodonta_africana
ENSCVAG00000005949	polrmt	98	45.054	ENSMFAG00000031466	POLRMT	96	45.264	Macaca_fascicularis
ENSCVAG00000005949	polrmt	98	45.303	ENSMNEG00000039129	POLRMT	96	44.946	Macaca_nemestrina
ENSCVAG00000005949	polrmt	87	62.994	ENSMLEG00000037404	POLRMT	95	62.994	Mandrillus_leucophaeus
ENSCVAG00000005949	polrmt	100	77.976	ENSMAMG00000019284	polrmt	100	77.976	Mastacembelus_armatus
ENSCVAG00000005949	polrmt	99	86.860	ENSMZEG00005009932	polrmt	100	81.334	Maylandia_zebra
ENSCVAG00000005949	polrmt	97	54.283	ENSMGAG00000003243	POLRMT	98	53.924	Meleagris_gallopavo
ENSCVAG00000005949	polrmt	95	62.215	ENSMAUG00000019392	Polrmt	95	62.378	Mesocricetus_auratus
ENSCVAG00000005949	polrmt	100	44.453	ENSMICG00000016701	POLRMT	100	45.060	Microcebus_murinus
ENSCVAG00000005949	polrmt	96	45.682	ENSMOCG00000008868	Polrmt	93	45.848	Microtus_ochrogaster
ENSCVAG00000005949	polrmt	96	71.485	ENSMMOG00000000705	polrmt	99	71.485	Mola_mola
ENSCVAG00000005949	polrmt	99	51.227	ENSMODG00000006478	POLRMT	100	49.513	Monodelphis_domestica
ENSCVAG00000005949	polrmt	100	75.019	ENSMALG00000021224	polrmt	100	75.019	Monopterus_albus
ENSCVAG00000005949	polrmt	99	57.081	MGP_CAROLIEiJ_G0015538	Polrmt	100	61.432	Mus_caroli
ENSCVAG00000005949	polrmt	97	57.081	ENSMUSG00000020329	Polrmt	99	61.201	Mus_musculus
ENSCVAG00000005949	polrmt	92	63.870	MGP_PahariEiJ_G0030951	Polrmt	100	60.970	Mus_pahari
ENSCVAG00000005949	polrmt	97	57.081	MGP_SPRETEiJ_G0016356	Polrmt	100	61.432	Mus_spretus
ENSCVAG00000005949	polrmt	98	45.410	ENSMPUG00000009910	POLRMT	96	45.090	Mustela_putorius_furo
ENSCVAG00000005949	polrmt	99	47.107	ENSMLUG00000009223	POLRMT	96	46.573	Myotis_lucifugus
ENSCVAG00000005949	polrmt	96	62.273	ENSNGAG00000005498	Polrmt	82	62.381	Nannospalax_galili
ENSCVAG00000005949	polrmt	99	87.053	ENSNBRG00000023530	polrmt	100	81.316	Neolamprologus_brichardi
ENSCVAG00000005949	polrmt	98	45.851	ENSNLEG00000000718	POLRMT	96	45.492	Nomascus_leucogenys
ENSCVAG00000005949	polrmt	67	55.860	ENSOPRG00000013579	POLRMT	67	56.085	Ochotona_princeps
ENSCVAG00000005949	polrmt	96	80.034	ENSONIG00000002405	polrmt	100	80.482	Oreochromis_niloticus
ENSCVAG00000005949	polrmt	100	77.986	ENSORLG00000004329	polrmt	97	77.986	Oryzias_latipes
ENSCVAG00000005949	polrmt	100	77.334	ENSORLG00020003896	polrmt	100	77.461	Oryzias_latipes_hni
ENSCVAG00000005949	polrmt	100	76.929	ENSORLG00015022238	polrmt	97	76.929	Oryzias_latipes_hsok
ENSCVAG00000005949	polrmt	100	74.755	ENSOMEG00000008292	polrmt	100	74.962	Oryzias_melastigma
ENSCVAG00000005949	polrmt	100	45.680	ENSOGAG00000007912	POLRMT	99	45.680	Otolemur_garnettii
ENSCVAG00000005949	polrmt	97	41.453	ENSOARG00000008898	POLRMT	93	41.332	Ovis_aries
ENSCVAG00000005949	polrmt	98	45.470	ENSPPAG00000030853	POLRMT	95	45.470	Pan_paniscus
ENSCVAG00000005949	polrmt	96	45.106	ENSPPAG00000043321	-	94	44.936	Pan_paniscus
ENSCVAG00000005949	polrmt	84	60.207	ENSPPRG00000001547	POLRMT	89	59.448	Panthera_pardus
ENSCVAG00000005949	polrmt	96	46.729	ENSPTRG00000010157	POLRMT	90	46.559	Pan_troglodytes
ENSCVAG00000005949	polrmt	96	45.060	ENSPTRG00000039638	-	94	44.889	Pan_troglodytes
ENSCVAG00000005949	polrmt	98	45.363	ENSPANG00000006649	POLRMT	96	45.447	Papio_anubis
ENSCVAG00000005949	polrmt	99	62.951	ENSPKIG00000024580	polrmt	100	61.186	Paramormyrops_kingsleyae
ENSCVAG00000005949	polrmt	91	76.719	ENSPMGG00000014627	polrmt	100	74.854	Periophthalmus_magnuspinnatus
ENSCVAG00000005949	polrmt	95	60.976	ENSPEMG00000011671	Polrmt	97	61.746	Peromyscus_maniculatus_bairdii
ENSCVAG00000005949	polrmt	72	56.946	ENSPMAG00000005070	-	99	56.946	Petromyzon_marinus
ENSCVAG00000005949	polrmt	99	52.373	ENSPCIG00000006103	POLRMT	97	51.522	Phascolarctos_cinereus
ENSCVAG00000005949	polrmt	100	85.143	ENSPFOG00000003911	polrmt	100	85.370	Poecilia_formosa
ENSCVAG00000005949	polrmt	93	81.027	ENSPLAG00000005743	polrmt	99	85.302	Poecilia_latipinna
ENSCVAG00000005949	polrmt	72	78.295	ENSPMEG00000011484	polrmt	95	78.068	Poecilia_mexicana
ENSCVAG00000005949	polrmt	97	85.097	ENSPMEG00000008947	polrmt	100	82.238	Poecilia_mexicana
ENSCVAG00000005949	polrmt	100	85.305	ENSPREG00000007650	polrmt	100	85.456	Poecilia_reticulata
ENSCVAG00000005949	polrmt	93	61.250	ENSPPYG00000009282	POLRMT	99	61.250	Pongo_abelii
ENSCVAG00000005949	polrmt	93	57.738	ENSPCAG00000010816	POLRMT	91	57.738	Procavia_capensis
ENSCVAG00000005949	polrmt	97	44.757	ENSPCOG00000014539	POLRMT	97	43.634	Propithecus_coquereli
ENSCVAG00000005949	polrmt	99	46.606	ENSPVAG00000008403	POLRMT	96	46.440	Pteropus_vampyrus
ENSCVAG00000005949	polrmt	99	86.377	ENSPNYG00000020790	polrmt	100	81.034	Pundamilia_nyererei
ENSCVAG00000005949	polrmt	100	64.859	ENSPNAG00000019790	polrmt	99	65.282	Pygocentrus_nattereri
ENSCVAG00000005949	polrmt	98	46.867	ENSRNOG00000024879	Polrmt	96	46.627	Rattus_norvegicus
ENSCVAG00000005949	polrmt	98	45.585	ENSRBIG00000006728	POLRMT	95	45.385	Rhinopithecus_bieti
ENSCVAG00000005949	polrmt	98	45.196	ENSRROG00000040809	POLRMT	96	45.194	Rhinopithecus_roxellana
ENSCVAG00000005949	polrmt	98	45.522	ENSSBOG00000025388	POLRMT	96	45.440	Saimiri_boliviensis_boliviensis
ENSCVAG00000005949	polrmt	66	61.055	ENSSHAG00000009387	-	100	61.425	Sarcophilus_harrisii
ENSCVAG00000005949	polrmt	99	62.623	ENSSFOG00015005074	polrmt	99	62.541	Scleropages_formosus
ENSCVAG00000005949	polrmt	100	77.371	ENSSMAG00000011851	polrmt	100	77.446	Scophthalmus_maximus
ENSCVAG00000005949	polrmt	98	82.514	ENSSDUG00000004410	polrmt	100	78.134	Seriola_dumerili
ENSCVAG00000005949	polrmt	100	78.118	ENSSLDG00000010643	polrmt	100	78.790	Seriola_lalandi_dorsalis
ENSCVAG00000005949	polrmt	99	82.315	ENSSPAG00000018740	polrmt	99	80.742	Stegastes_partitus
ENSCVAG00000005949	polrmt	98	46.491	ENSSSCG00000035693	POLRMT	96	46.778	Sus_scrofa
ENSCVAG00000005949	polrmt	80	60.496	ENSTGUG00000000621	POLRMT	100	60.794	Taeniopygia_guttata
ENSCVAG00000005949	polrmt	97	73.770	ENSTRUG00000018040	polrmt	95	73.770	Takifugu_rubripes
ENSCVAG00000005949	polrmt	83	83.884	ENSTNIG00000010642	polrmt	100	84.418	Tetraodon_nigroviridis
ENSCVAG00000005949	polrmt	67	64.789	ENSTTRG00000011329	POLRMT	65	64.789	Tursiops_truncatus
ENSCVAG00000005949	polrmt	99	46.325	ENSUAMG00000019616	POLRMT	96	46.240	Ursus_americanus
ENSCVAG00000005949	polrmt	94	46.074	ENSVVUG00000022627	POLRMT	95	45.955	Vulpes_vulpes
ENSCVAG00000005949	polrmt	97	58.262	ENSXETG00000006545	polrmt	99	53.922	Xenopus_tropicalis
ENSCVAG00000005949	polrmt	100	86.727	ENSXMAG00000012464	polrmt	100	86.727	Xiphophorus_maculatus