EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000005998 (Gene tree)
Gene ID: 107088675
Gene Symbol: cpeb3
Alias: si:ch211-129m12.2
Full Name: cytoplasmic polyadenylation element binding protein 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 80347 bases
Position: chrKL652511.1:383238-463584
Accession: 107088675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004654	RRM_1	PF00076.22	1.1e-10	1	1
ENSCVAP00000004667	RRM_1	PF00076.22	1.3e-10	1	1
ENSCVAP00000004684	RRM_1	PF00076.22	1.3e-10	1	1
ENSCVAP00000022971	RRM_1	PF00076.22	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007943	-	6938	XM_015380989	ENSCVAP00000022971	652 (aa)	XP_015236475	UPI0007427660
ENSCVAT00000007982	-	1866	XM_015381019	ENSCVAP00000004654	621 (aa)	XP_015236505	UPI000742AA6C
ENSCVAT00000007960	-	7109	XM_015380998	ENSCVAP00000004667	652 (aa)	XP_015236484	UPI0007427660
ENSCVAT00000007931	-	6967	-	ENSCVAP00000004684	652 (aa)	-	UPI0007427660

Gene Model

Click here to download ENSCVAG00000005998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000005998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000005998	cpeb3	89	65.112	ENSCVAG00000013200	cpeb2	95	73.303
ENSCVAG00000005998	cpeb3	85	68.433	ENSCVAG00000015292	-	82	59.490

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000005998	cpeb3	100	69.956	ENSG00000107864	CPEB3	100	71.533	Homo_sapiens
ENSCVAG00000005998	cpeb3	100	86.303	ENSAPOG00000003625	cpeb3	100	87.334	Acanthochromis_polyacanthus
ENSCVAG00000005998	cpeb3	100	72.834	ENSAMEG00000014204	CPEB3	100	72.337	Ailuropoda_melanoleuca
ENSCVAG00000005998	cpeb3	100	86.136	ENSACIG00000001933	cpeb3	100	87.021	Amphilophus_citrinellus
ENSCVAG00000005998	cpeb3	100	86.283	ENSAOCG00000015423	cpeb3	100	87.021	Amphiprion_ocellaris
ENSCVAG00000005998	cpeb3	100	85.340	ENSATEG00000010649	cpeb3	100	85.648	Anabas_testudineus
ENSCVAG00000005998	cpeb3	100	76.540	ENSACAG00000006335	CPEB3	100	75.994	Anolis_carolinensis
ENSCVAG00000005998	cpeb3	100	70.637	ENSANAG00000037406	CPEB3	100	71.210	Aotus_nancymaae
ENSCVAG00000005998	cpeb3	100	86.431	ENSACLG00000018590	cpeb3	89	87.021	Astatotilapia_calliptera
ENSCVAG00000005998	cpeb3	100	69.540	ENSBTAG00000015450	CPEB3	94	93.709	Bos_taurus
ENSCVAG00000005998	cpeb3	100	70.000	ENSCJAG00000008495	CPEB3	100	71.788	Callithrix_jacchus
ENSCVAG00000005998	cpeb3	100	70.145	ENSCAFG00000007423	CPEB3	100	71.241	Canis_familiaris
ENSCVAG00000005998	cpeb3	100	69.487	ENSCAFG00020001981	CPEB3	92	93.464	Canis_lupus_dingo
ENSCVAG00000005998	cpeb3	100	70.694	ENSCHIG00000017337	CPEB3	100	71.788	Capra_hircus
ENSCVAG00000005998	cpeb3	87	82.949	ENSTSYG00000003928	CPEB3	82	82.949	Carlito_syrichta
ENSCVAG00000005998	cpeb3	100	69.986	ENSCCAG00000033267	CPEB3	100	71.071	Cebus_capucinus
ENSCVAG00000005998	cpeb3	100	70.207	ENSCATG00000038447	CPEB3	100	71.290	Cercocebus_atys
ENSCVAG00000005998	cpeb3	72	83.579	ENSCLAG00000011817	CPEB3	95	83.403	Chinchilla_lanigera
ENSCVAG00000005998	cpeb3	100	69.472	ENSCSAG00000006579	CPEB3	100	70.972	Chlorocebus_sabaeus
ENSCVAG00000005998	cpeb3	58	74.737	ENSCHOG00000000272	-	100	74.737	Choloepus_hoffmanni
ENSCVAG00000005998	cpeb3	100	77.206	ENSCPBG00000023779	CPEB3	100	76.219	Chrysemys_picta_bellii
ENSCVAG00000005998	cpeb3	100	70.401	ENSCANG00000040306	CPEB3	100	71.488	Colobus_angolensis_palliatus
ENSCVAG00000005998	cpeb3	100	71.250	ENSCGRG00001003846	Cpeb3	100	71.369	Cricetulus_griseus_chok1gshd
ENSCVAG00000005998	cpeb3	65	84.670	ENSCGRG00000002839	Cpeb3	100	84.670	Cricetulus_griseus_crigri
ENSCVAG00000005998	cpeb3	90	79.153	ENSCSEG00000008423	cpeb3	100	78.664	Cynoglossus_semilaevis
ENSCVAG00000005998	cpeb3	100	74.173	ENSDARG00000060103	cpeb3	100	73.071	Danio_rerio
ENSCVAG00000005998	cpeb3	100	65.049	ENSDNOG00000048639	CPEB3	100	65.922	Dasypus_novemcinctus
ENSCVAG00000005998	cpeb3	93	86.261	ENSDORG00000028940	Cpeb3	84	87.972	Dipodomys_ordii
ENSCVAG00000005998	cpeb3	100	64.993	ENSETEG00000000111	CPEB3	100	65.871	Echinops_telfairi
ENSCVAG00000005998	cpeb3	91	62.362	ENSEBUG00000010745	cpeb3	79	62.323	Eptatretus_burgeri
ENSCVAG00000005998	cpeb3	100	70.499	ENSEASG00005011095	CPEB3	100	71.269	Equus_asinus_asinus
ENSCVAG00000005998	cpeb3	100	70.596	ENSECAG00000000077	CPEB3	100	71.369	Equus_caballus
ENSCVAG00000005998	cpeb3	100	81.409	ENSELUG00000019251	cpeb3	100	80.902	Esox_lucius
ENSCVAG00000005998	cpeb3	100	70.556	ENSFCAG00000032380	CPEB3	100	71.608	Felis_catus
ENSCVAG00000005998	cpeb3	100	74.924	ENSFALG00000007952	CPEB3	87	75.569	Ficedula_albicollis
ENSCVAG00000005998	cpeb3	87	86.866	ENSFDAG00000016459	CPEB3	86	86.866	Fukomys_damarensis
ENSCVAG00000005998	cpeb3	100	87.149	ENSFHEG00000021371	cpeb3	100	87.592	Fundulus_heteroclitus
ENSCVAG00000005998	cpeb3	88	80.135	ENSGMOG00000008307	cpeb3	99	77.872	Gadus_morhua
ENSCVAG00000005998	cpeb3	100	75.912	ENSGALG00000006912	CPEB3	100	75.918	Gallus_gallus
ENSCVAG00000005998	cpeb3	99	84.524	ENSGACG00000002944	cpeb3	99	83.036	Gasterosteus_aculeatus
ENSCVAG00000005998	cpeb3	100	77.400	ENSGAGG00000008528	CPEB3	100	76.775	Gopherus_agassizii
ENSCVAG00000005998	cpeb3	100	70.180	ENSGGOG00000016441	CPEB3	100	71.688	Gorilla_gorilla
ENSCVAG00000005998	cpeb3	100	86.263	ENSHBUG00000004097	cpeb3	93	87.445	Haplochromis_burtoni
ENSCVAG00000005998	cpeb3	100	70.483	ENSHGLG00000014022	CPEB3	100	70.874	Heterocephalus_glaber_female
ENSCVAG00000005998	cpeb3	100	70.588	ENSHGLG00100005200	CPEB3	100	70.605	Heterocephalus_glaber_male
ENSCVAG00000005998	cpeb3	100	80.781	ENSHCOG00000005747	cpeb3	100	80.030	Hippocampus_comes
ENSCVAG00000005998	cpeb3	100	78.955	ENSIPUG00000018571	cpeb3	100	79.254	Ictalurus_punctatus
ENSCVAG00000005998	cpeb3	100	71.509	ENSSTOG00000028061	CPEB3	100	71.388	Ictidomys_tridecemlineatus
ENSCVAG00000005998	cpeb3	65	84.670	ENSJJAG00000009135	Cpeb3	100	84.670	Jaculus_jaculus
ENSCVAG00000005998	cpeb3	100	85.567	ENSLBEG00000025961	cpeb3	100	86.156	Labrus_bergylta
ENSCVAG00000005998	cpeb3	100	76.043	ENSLACG00000011307	CPEB3	92	75.659	Latimeria_chalumnae
ENSCVAG00000005998	cpeb3	100	79.728	ENSLOCG00000007131	cpeb3	100	78.419	Lepisosteus_oculatus
ENSCVAG00000005998	cpeb3	100	75.334	ENSLAFG00000018716	CPEB3	90	85.880	Loxodonta_africana
ENSCVAG00000005998	cpeb3	100	67.811	ENSMFAG00000025613	CPEB3	100	68.723	Macaca_fascicularis
ENSCVAG00000005998	cpeb3	100	70.401	ENSMMUG00000015050	CPEB3	100	71.349	Macaca_mulatta
ENSCVAG00000005998	cpeb3	100	70.110	ENSMNEG00000045465	CPEB3	100	71.191	Macaca_nemestrina
ENSCVAG00000005998	cpeb3	89	82.949	ENSMLEG00000031794	CPEB3	98	82.949	Mandrillus_leucophaeus
ENSCVAG00000005998	cpeb3	100	85.819	ENSMAMG00000012794	cpeb3	100	85.234	Mastacembelus_armatus
ENSCVAG00000005998	cpeb3	100	86.431	ENSMZEG00005012068	cpeb3	100	87.168	Maylandia_zebra
ENSCVAG00000005998	cpeb3	100	75.152	ENSMGAG00000009148	CPEB3	99	75.684	Meleagris_gallopavo
ENSCVAG00000005998	cpeb3	100	70.621	ENSMAUG00000002789	Cpeb3	100	71.151	Mesocricetus_auratus
ENSCVAG00000005998	cpeb3	100	70.990	ENSMICG00000026866	CPEB3	100	71.388	Microcebus_murinus
ENSCVAG00000005998	cpeb3	100	70.816	ENSMOCG00000016486	Cpeb3	100	71.349	Microtus_ochrogaster
ENSCVAG00000005998	cpeb3	96	83.173	ENSMMOG00000008209	cpeb3	88	84.936	Mola_mola
ENSCVAG00000005998	cpeb3	100	68.942	ENSMODG00000006673	CPEB3	100	68.802	Monodelphis_domestica
ENSCVAG00000005998	cpeb3	100	84.689	ENSMALG00000009305	cpeb3	98	89.776	Monopterus_albus
ENSCVAG00000005998	cpeb3	100	70.621	MGP_CAROLIEiJ_G0022910	Cpeb3	100	84.670	Mus_caroli
ENSCVAG00000005998	cpeb3	100	70.874	ENSMUSG00000039652	Cpeb3	100	84.670	Mus_musculus
ENSCVAG00000005998	cpeb3	100	70.259	MGP_PahariEiJ_G0014405	Cpeb3	100	84.670	Mus_pahari
ENSCVAG00000005998	cpeb3	100	70.580	MGP_SPRETEiJ_G0023829	Cpeb3	100	84.670	Mus_spretus
ENSCVAG00000005998	cpeb3	100	69.198	ENSMPUG00000017227	CPEB3	100	70.274	Mustela_putorius_furo
ENSCVAG00000005998	cpeb3	100	71.648	ENSNGAG00000015621	Cpeb3	100	72.090	Nannospalax_galili
ENSCVAG00000005998	cpeb3	100	84.946	ENSNBRG00000018343	cpeb3	91	86.329	Neolamprologus_brichardi
ENSCVAG00000005998	cpeb3	100	70.776	ENSNLEG00000012600	CPEB3	100	71.588	Nomascus_leucogenys
ENSCVAG00000005998	cpeb3	79	80.526	ENSMEUG00000009948	-	75	80.526	Notamacropus_eugenii
ENSCVAG00000005998	cpeb3	100	68.937	ENSODEG00000004591	CPEB3	100	69.452	Octodon_degus
ENSCVAG00000005998	cpeb3	51	92.424	ENSOANG00000015723	-	100	92.424	Ornithorhynchus_anatinus
ENSCVAG00000005998	cpeb3	100	71.269	ENSOCUG00000010454	CPEB3	100	71.849	Oryctolagus_cuniculus
ENSCVAG00000005998	cpeb3	100	83.413	ENSORLG00000000726	cpeb3	100	83.413	Oryzias_latipes
ENSCVAG00000005998	cpeb3	100	82.643	ENSORLG00020004475	cpeb3	100	83.280	Oryzias_latipes_hni
ENSCVAG00000005998	cpeb3	100	82.803	ENSORLG00015011683	cpeb3	100	83.439	Oryzias_latipes_hsok
ENSCVAG00000005998	cpeb3	100	83.254	ENSOMEG00000018265	cpeb3	92	84.518	Oryzias_melastigma
ENSCVAG00000005998	cpeb3	100	69.465	ENSOGAG00000002002	CPEB3	100	70.349	Otolemur_garnettii
ENSCVAG00000005998	cpeb3	100	70.365	ENSOARG00000016671	CPEB3	100	71.637	Ovis_aries
ENSCVAG00000005998	cpeb3	100	70.247	ENSPPRG00000015654	CPEB3	100	71.345	Panthera_pardus
ENSCVAG00000005998	cpeb3	69	83.628	ENSPTIG00000012018	CPEB3	97	94.828	Panthera_tigris_altaica
ENSCVAG00000005998	cpeb3	100	70.180	ENSPTRG00000002753	CPEB3	100	71.688	Pan_troglodytes
ENSCVAG00000005998	cpeb3	100	68.707	ENSPANG00000021561	CPEB3	100	69.371	Papio_anubis
ENSCVAG00000005998	cpeb3	100	82.467	ENSPKIG00000015878	cpeb3	100	79.167	Paramormyrops_kingsleyae
ENSCVAG00000005998	cpeb3	100	74.803	ENSPMGG00000022722	cpeb3	100	73.333	Periophthalmus_magnuspinnatus
ENSCVAG00000005998	cpeb3	100	70.816	ENSPEMG00000008448	Cpeb3	100	71.071	Peromyscus_maniculatus_bairdii
ENSCVAG00000005998	cpeb3	100	69.031	ENSPCIG00000017302	CPEB3	100	69.441	Phascolarctos_cinereus
ENSCVAG00000005998	cpeb3	100	85.962	ENSPFOG00000011231	cpeb3	100	86.593	Poecilia_formosa
ENSCVAG00000005998	cpeb3	100	88.156	ENSPLAG00000002852	cpeb3	100	89.505	Poecilia_latipinna
ENSCVAG00000005998	cpeb3	100	89.339	ENSPMEG00000021572	cpeb3	100	90.691	Poecilia_mexicana
ENSCVAG00000005998	cpeb3	100	89.640	ENSPREG00000003085	cpeb3	100	90.991	Poecilia_reticulata
ENSCVAG00000005998	cpeb3	100	67.587	ENSPPYG00000002481	CPEB3	100	69.152	Pongo_abelii
ENSCVAG00000005998	cpeb3	100	63.874	ENSPCAG00000012417	CPEB3	100	65.145	Procavia_capensis
ENSCVAG00000005998	cpeb3	100	70.711	ENSPCOG00000023690	CPEB3	100	71.809	Propithecus_coquereli
ENSCVAG00000005998	cpeb3	80	83.421	ENSPVAG00000007664	CPEB3	77	83.421	Pteropus_vampyrus
ENSCVAG00000005998	cpeb3	100	86.263	ENSPNYG00000005300	cpeb3	100	87.445	Pundamilia_nyererei
ENSCVAG00000005998	cpeb3	100	79.649	ENSPNAG00000012111	cpeb3	100	79.001	Pygocentrus_nattereri
ENSCVAG00000005998	cpeb3	100	67.972	ENSRNOG00000020689	Cpeb3	94	67.511	Rattus_norvegicus
ENSCVAG00000005998	cpeb3	100	70.596	ENSRBIG00000041079	CPEB3	100	71.688	Rhinopithecus_bieti
ENSCVAG00000005998	cpeb3	100	70.596	ENSRROG00000031558	CPEB3	100	71.688	Rhinopithecus_roxellana
ENSCVAG00000005998	cpeb3	67	86.525	ENSSBOG00000035843	CPEB3	99	86.525	Saimiri_boliviensis_boliviensis
ENSCVAG00000005998	cpeb3	100	75.878	ENSSFOG00015004974	cpeb3	100	75.498	Scleropages_formosus
ENSCVAG00000005998	cpeb3	65	75.306	ENSSFOG00015018275	-	99	75.369	Scleropages_formosus
ENSCVAG00000005998	cpeb3	100	84.793	ENSSMAG00000013924	cpeb3	100	84.923	Scophthalmus_maximus
ENSCVAG00000005998	cpeb3	100	83.988	ENSSDUG00000019766	cpeb3	100	84.441	Seriola_dumerili
ENSCVAG00000005998	cpeb3	100	85.935	ENSSLDG00000021438	cpeb3	100	86.399	Seriola_lalandi_dorsalis
ENSCVAG00000005998	cpeb3	58	83.947	ENSSARG00000001994	CPEB3	100	83.947	Sorex_araneus
ENSCVAG00000005998	cpeb3	100	85.260	ENSSPAG00000004725	cpeb3	100	86.127	Stegastes_partitus
ENSCVAG00000005998	cpeb3	100	70.055	ENSSSCG00000010468	CPEB3	100	70.954	Sus_scrofa
ENSCVAG00000005998	cpeb3	100	75.912	ENSTGUG00000008988	CPEB3	100	76.540	Taeniopygia_guttata
ENSCVAG00000005998	cpeb3	66	75.806	ENSTBEG00000013125	-	60	75.806	Tupaia_belangeri
ENSCVAG00000005998	cpeb3	100	65.881	ENSTTRG00000012334	CPEB3	100	67.039	Tursiops_truncatus
ENSCVAG00000005998	cpeb3	100	69.038	ENSUAMG00000010827	CPEB3	90	88.843	Ursus_americanus
ENSCVAG00000005998	cpeb3	100	70.145	ENSVVUG00000021375	CPEB3	100	71.241	Vulpes_vulpes
ENSCVAG00000005998	cpeb3	100	73.438	ENSXETG00000012190	cpeb3	98	74.219	Xenopus_tropicalis
ENSCVAG00000005998	cpeb3	100	88.031	ENSXCOG00000006122	cpeb3	100	89.291	Xiphophorus_couchianus
ENSCVAG00000005998	cpeb3	100	85.984	ENSXMAG00000007652	cpeb3	94	97.945	Xiphophorus_maculatus