EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000006032 (Gene tree)
Gene ID: 107087726
Gene Symbol: sall2
Alias: fc29e07|sb:cb763|si:ch211-10e2.7|wu:fc29e07
Full Name: sal-like protein 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 12424 bases
Position: chrKL652692.1:829925-842348
Accession: 107087726
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004721	zf-C2H2	PF00096.26	1.3e-16	1	2
ENSCVAP00000004721	zf-C2H2	PF00096.26	1.3e-16	2	2
ENSCVAP00000004721	zf-met	PF12874.7	1.5e-10	1	2
ENSCVAP00000004721	zf-met	PF12874.7	1.5e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007874	-	5826	XM_015379452	ENSCVAP00000004721	1255 (aa)	XP_015234938	UPI000742C841

Gene Model

Click here to download ENSCVAG00000006032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006032's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000006032	sall2	61	67.647	ENSCVAG00000007475	si:ch211-212k18.5	56	67.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006032	sall2	99	66.193	ENSAPOG00000015347	sall2	89	66.588	Acanthochromis_polyacanthus
ENSCVAG00000006032	sall2	59	46.113	ENSACIG00000019922	si:ch211-212k18.5	67	47.389	Amphilophus_citrinellus
ENSCVAG00000006032	sall2	99	66.114	ENSAOCG00000016559	sall2	89	66.667	Amphiprion_ocellaris
ENSCVAG00000006032	sall2	71	69.231	ENSAPEG00000020215	sall2	99	70.000	Amphiprion_percula
ENSCVAG00000006032	sall2	100	63.023	ENSATEG00000007303	sall2	100	62.839	Anabas_testudineus
ENSCVAG00000006032	sall2	58	45.251	ENSATEG00000001254	si:ch211-212k18.5	71	47.403	Anabas_testudineus
ENSCVAG00000006032	sall2	99	65.351	ENSACLG00000019867	sall2	100	64.241	Astatotilapia_calliptera
ENSCVAG00000006032	sall2	67	45.108	ENSACLG00000009709	si:ch211-212k18.5	62	48.433	Astatotilapia_calliptera
ENSCVAG00000006032	sall2	62	78.125	ENSAMXG00000010979	si:ch211-212k18.5	59	78.125	Astyanax_mexicanus
ENSCVAG00000006032	sall2	73	46.838	ENSAMXG00000020956	sall2	67	47.380	Astyanax_mexicanus
ENSCVAG00000006032	sall2	62	71.875	ENSCSEG00000004426	si:ch211-212k18.5	58	71.875	Cynoglossus_semilaevis
ENSCVAG00000006032	sall2	99	57.019	ENSCSEG00000021148	sall2	88	57.783	Cynoglossus_semilaevis
ENSCVAG00000006032	sall2	70	64.865	ENSDARG00000103316	si:ch211-212k18.5	62	64.865	Danio_rerio
ENSCVAG00000006032	sall2	94	43.331	ENSDARG00000075116	sall2	92	42.882	Danio_rerio
ENSCVAG00000006032	sall2	93	49.544	ENSELUG00000004389	sall2	87	51.738	Esox_lucius
ENSCVAG00000006032	sall2	60	44.122	ENSELUG00000024534	si:ch211-212k18.5	55	45.308	Esox_lucius
ENSCVAG00000006032	sall2	62	75.862	ENSFHEG00000017264	si:ch211-212k18.5	58	65.789	Fundulus_heteroclitus
ENSCVAG00000006032	sall2	100	81.452	ENSFHEG00000017550	sall2	100	80.979	Fundulus_heteroclitus
ENSCVAG00000006032	sall2	100	80.760	ENSGAFG00000015194	sall2	100	79.335	Gambusia_affinis
ENSCVAG00000006032	sall2	62	72.727	ENSGAFG00000003746	si:ch211-212k18.5	64	48.289	Gambusia_affinis
ENSCVAG00000006032	sall2	63	75.000	ENSHBUG00000019672	si:ch211-212k18.5	59	55.769	Haplochromis_burtoni
ENSCVAG00000006032	sall2	99	65.272	ENSHBUG00000002882	sall2	90	64.164	Haplochromis_burtoni
ENSCVAG00000006032	sall2	62	45.522	ENSIPUG00000002559	sall2	56	46.388	Ictalurus_punctatus
ENSCVAG00000006032	sall2	100	66.459	ENSKMAG00000020172	sall2	99	67.005	Kryptolebias_marmoratus
ENSCVAG00000006032	sall2	55	78.947	ENSLBEG00000020887	si:ch211-212k18.5	58	67.647	Labrus_bergylta
ENSCVAG00000006032	sall2	99	63.276	ENSMAMG00000016229	sall2	99	63.509	Mastacembelus_armatus
ENSCVAG00000006032	sall2	59	45.833	ENSMAMG00000015887	si:ch211-212k18.5	77	48.134	Mastacembelus_armatus
ENSCVAG00000006032	sall2	99	65.351	ENSMZEG00005012103	sall2	90	64.241	Maylandia_zebra
ENSCVAG00000006032	sall2	63	75.000	ENSMZEG00005021214	si:ch211-212k18.5	59	55.769	Maylandia_zebra
ENSCVAG00000006032	sall2	51	63.415	ENSMMOG00000012726	si:ch211-212k18.5	66	50.877	Mola_mola
ENSCVAG00000006032	sall2	66	60.096	ENSNBRG00000017645	sall2	68	60.693	Neolamprologus_brichardi
ENSCVAG00000006032	sall2	99	60.808	ENSORLG00000026871	sall2	98	60.333	Oryzias_latipes
ENSCVAG00000006032	sall2	59	45.515	ENSORLG00000030429	si:ch211-212k18.5	58	65.854	Oryzias_latipes
ENSCVAG00000006032	sall2	99	61.076	ENSORLG00020007873	sall2	98	60.791	Oryzias_latipes_hni
ENSCVAG00000006032	sall2	62	72.727	ENSORLG00020008145	si:ch211-212k18.5	59	54.717	Oryzias_latipes_hni
ENSCVAG00000006032	sall2	99	60.949	ENSORLG00015002422	sall2	98	60.474	Oryzias_latipes_hsok
ENSCVAG00000006032	sall2	62	72.727	ENSORLG00015004982	si:ch211-212k18.5	59	54.717	Oryzias_latipes_hsok
ENSCVAG00000006032	sall2	99	60.808	ENSOMEG00000012904	sall2	98	60.553	Oryzias_melastigma
ENSCVAG00000006032	sall2	59	44.284	ENSOMEG00000013949	si:ch211-212k18.5	69	45.812	Oryzias_melastigma
ENSCVAG00000006032	sall2	99	43.220	ENSPKIG00000009207	sall2	84	43.087	Paramormyrops_kingsleyae
ENSCVAG00000006032	sall2	67	41.782	ENSPMGG00000018714	si:ch211-212k18.5	67	43.160	Periophthalmus_magnuspinnatus
ENSCVAG00000006032	sall2	51	65.000	ENSPFOG00000023705	si:ch211-212k18.5	65	48.289	Poecilia_formosa
ENSCVAG00000006032	sall2	100	79.493	ENSPFOG00000016504	sall2	100	81.394	Poecilia_formosa
ENSCVAG00000006032	sall2	100	79.572	ENSPLAG00000018320	sall2	100	81.473	Poecilia_latipinna
ENSCVAG00000006032	sall2	69	44.650	ENSPLAG00000002577	si:ch211-212k18.5	65	47.889	Poecilia_latipinna
ENSCVAG00000006032	sall2	100	79.335	ENSPMEG00000006335	sall2	100	81.235	Poecilia_mexicana
ENSCVAG00000006032	sall2	51	65.000	ENSPMEG00000016395	si:ch211-212k18.5	65	48.289	Poecilia_mexicana
ENSCVAG00000006032	sall2	100	79.414	ENSPREG00000021908	sall2	100	81.314	Poecilia_reticulata
ENSCVAG00000006032	sall2	52	55.769	ENSPREG00000005292	si:ch211-212k18.5	57	65.000	Poecilia_reticulata
ENSCVAG00000006032	sall2	73	46.195	ENSPNAG00000021463	sall2	66	47.876	Pygocentrus_nattereri
ENSCVAG00000006032	sall2	50	70.732	ENSPNAG00000006123	si:ch211-212k18.5	57	70.732	Pygocentrus_nattereri
ENSCVAG00000006032	sall2	99	64.280	ENSSMAG00000014157	sall2	90	63.594	Scophthalmus_maximus
ENSCVAG00000006032	sall2	100	65.140	ENSSDUG00000012274	sall2	91	65.140	Seriola_dumerili
ENSCVAG00000006032	sall2	100	64.984	ENSSLDG00000001653	sall2	91	64.907	Seriola_lalandi_dorsalis
ENSCVAG00000006032	sall2	64	46.774	ENSSLDG00000003393	si:ch211-212k18.5	58	47.287	Seriola_lalandi_dorsalis
ENSCVAG00000006032	sall2	100	65.891	ENSSPAG00000023009	sall2	90	66.047	Stegastes_partitus
ENSCVAG00000006032	sall2	99	55.816	ENSTRUG00000024556	sall2	98	55.729	Takifugu_rubripes
ENSCVAG00000006032	sall2	84	52.165	ENSTNIG00000007934	sall2	96	53.348	Tetraodon_nigroviridis
ENSCVAG00000006032	sall2	100	81.631	ENSXMAG00000000902	sall2	100	81.473	Xiphophorus_maculatus