EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000006034 (Gene tree)
Gene ID: 107098364
Gene Symbol: mrps17
Alias: zgc:110031
Full Name: mitochondrial ribosomal protein S17
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 3863 bases
Position: chrKL653271.1:225711-229573
Accession: 107098364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004717	Ribosomal_S17	PF00366.20	4e-17	1	1
ENSCVAP00000004720	Ribosomal_S17	PF00366.20	4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007873	-	843	XM_015396000	ENSCVAP00000004720	146 (aa)	XP_015251486	UPI000742B74A
ENSCVAT00000007883	-	710	XM_015396001	ENSCVAP00000004717	146 (aa)	XP_015251487	UPI000742B74A

Gene Model

Click here to download ENSCVAG00000006034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006034's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006034	mrps17	90	75.188	ENSG00000239789	MRPS17	100	75.188	Homo_sapiens
ENSCVAG00000006034	mrps17	100	82.877	ENSAPOG00000000295	mrps17	90	82.877	Acanthochromis_polyacanthus
ENSCVAG00000006034	mrps17	90	68.182	ENSAMEG00000016161	-	94	68.182	Ailuropoda_melanoleuca
ENSCVAG00000006034	mrps17	95	84.058	ENSACIG00000019454	mrps17	97	84.328	Amphilophus_citrinellus
ENSCVAG00000006034	mrps17	100	82.192	ENSAOCG00000015138	mrps17	100	82.192	Amphiprion_ocellaris
ENSCVAG00000006034	mrps17	100	82.877	ENSAPEG00000017481	mrps17	100	82.877	Amphiprion_percula
ENSCVAG00000006034	mrps17	100	80.822	ENSATEG00000007899	mrps17	100	80.822	Anabas_testudineus
ENSCVAG00000006034	mrps17	91	72.794	ENSAPLG00000010523	-	99	72.794	Anas_platyrhynchos
ENSCVAG00000006034	mrps17	90	58.647	ENSANAG00000023853	-	99	58.647	Aotus_nancymaae
ENSCVAG00000006034	mrps17	90	63.359	ENSANAG00000025061	-	99	62.879	Aotus_nancymaae
ENSCVAG00000006034	mrps17	63	68.817	ENSANAG00000030302	-	79	68.817	Aotus_nancymaae
ENSCVAG00000006034	mrps17	100	84.932	ENSACLG00000007174	mrps17	100	84.932	Astatotilapia_calliptera
ENSCVAG00000006034	mrps17	88	80.620	ENSAMXG00000030410	mrps17	100	77.143	Astyanax_mexicanus
ENSCVAG00000006034	mrps17	89	74.615	ENSBTAG00000007934	MRPS17	98	74.615	Bos_taurus
ENSCVAG00000006034	mrps17	89	73.846	ENSBTAG00000023186	-	98	73.846	Bos_taurus
ENSCVAG00000006034	mrps17	90	72.932	ENSCJAG00000022938	-	99	72.932	Callithrix_jacchus
ENSCVAG00000006034	mrps17	90	73.684	ENSCJAG00000021291	-	99	73.684	Callithrix_jacchus
ENSCVAG00000006034	mrps17	90	66.917	ENSCJAG00000022879	-	99	66.917	Callithrix_jacchus
ENSCVAG00000006034	mrps17	90	72.727	ENSCAFG00000010098	-	91	72.727	Canis_familiaris
ENSCVAG00000006034	mrps17	90	72.727	ENSCAFG00020004866	-	99	72.727	Canis_lupus_dingo
ENSCVAG00000006034	mrps17	89	73.846	ENSCHIG00000014572	-	98	73.846	Capra_hircus
ENSCVAG00000006034	mrps17	90	72.519	ENSTSYG00000001260	-	98	72.519	Carlito_syrichta
ENSCVAG00000006034	mrps17	77	78.070	ENSCAPG00000006241	-	97	78.070	Cavia_aperea
ENSCVAG00000006034	mrps17	90	74.436	ENSCCAG00000025426	-	99	74.436	Cebus_capucinus
ENSCVAG00000006034	mrps17	90	60.606	ENSCCAG00000037194	-	99	60.606	Cebus_capucinus
ENSCVAG00000006034	mrps17	90	63.636	ENSCATG00000030575	-	99	63.636	Cercocebus_atys
ENSCVAG00000006034	mrps17	77	72.566	ENSCATG00000039682	-	100	72.807	Cercocebus_atys
ENSCVAG00000006034	mrps17	90	74.242	ENSCLAG00000007650	-	98	74.242	Chinchilla_lanigera
ENSCVAG00000006034	mrps17	90	75.188	ENSCSAG00000016120	-	99	75.188	Chlorocebus_sabaeus
ENSCVAG00000006034	mrps17	90	67.669	ENSCSAG00000019470	-	99	67.669	Chlorocebus_sabaeus
ENSCVAG00000006034	mrps17	62	68.132	ENSCHOG00000013255	-	99	68.132	Choloepus_hoffmanni
ENSCVAG00000006034	mrps17	90	71.970	ENSCHOG00000010576	-	99	71.970	Choloepus_hoffmanni
ENSCVAG00000006034	mrps17	90	73.134	ENSCPBG00000014888	-	98	73.134	Chrysemys_picta_bellii
ENSCVAG00000006034	mrps17	90	75.188	ENSCANG00000030538	-	99	75.188	Colobus_angolensis_palliatus
ENSCVAG00000006034	mrps17	90	59.398	ENSCANG00000035780	-	93	59.398	Colobus_angolensis_palliatus
ENSCVAG00000006034	mrps17	90	65.152	ENSCANG00000035889	-	99	65.152	Colobus_angolensis_palliatus
ENSCVAG00000006034	mrps17	90	71.970	ENSCGRG00001012873	Mrps17	99	71.970	Cricetulus_griseus_chok1gshd
ENSCVAG00000006034	mrps17	100	73.469	ENSCSEG00000018563	mrps17	100	73.469	Cynoglossus_semilaevis
ENSCVAG00000006034	mrps17	91	76.692	ENSDARG00000054164	mrps17	98	76.692	Danio_rerio
ENSCVAG00000006034	mrps17	90	74.046	ENSDNOG00000014785	-	90	74.046	Dasypus_novemcinctus
ENSCVAG00000006034	mrps17	67	34.694	FBgn0034986	mRpS17	63	34.694	Drosophila_melanogaster
ENSCVAG00000006034	mrps17	96	51.748	ENSEBUG00000010858	mrps17	85	51.748	Eptatretus_burgeri
ENSCVAG00000006034	mrps17	86	72.800	ENSEASG00005008885	-	100	72.800	Equus_asinus_asinus
ENSCVAG00000006034	mrps17	86	72.800	ENSECAG00000012583	-	100	72.800	Equus_caballus
ENSCVAG00000006034	mrps17	83	61.983	ENSECAG00000028191	-	97	61.983	Equus_caballus
ENSCVAG00000006034	mrps17	98	74.830	ENSELUG00000006708	mrps17	97	74.830	Esox_lucius
ENSCVAG00000006034	mrps17	90	73.485	ENSFCAG00000041039	-	99	73.485	Felis_catus
ENSCVAG00000006034	mrps17	99	69.595	ENSFALG00000006796	-	99	69.595	Ficedula_albicollis
ENSCVAG00000006034	mrps17	90	73.282	ENSFDAG00000001915	-	98	73.282	Fukomys_damarensis
ENSCVAG00000006034	mrps17	100	86.986	ENSFHEG00000023082	mrps17	100	86.986	Fundulus_heteroclitus
ENSCVAG00000006034	mrps17	92	77.941	ENSGMOG00000007056	mrps17	100	77.941	Gadus_morhua
ENSCVAG00000006034	mrps17	90	73.881	ENSGALG00000002379	MRPS17	98	73.881	Gallus_gallus
ENSCVAG00000006034	mrps17	100	86.301	ENSGAFG00000001727	mrps17	100	86.301	Gambusia_affinis
ENSCVAG00000006034	mrps17	95	83.571	ENSGACG00000020492	mrps17	100	83.571	Gasterosteus_aculeatus
ENSCVAG00000006034	mrps17	90	73.134	ENSGAGG00000022429	-	99	73.134	Gopherus_agassizii
ENSCVAG00000006034	mrps17	90	75.940	ENSGGOG00000039358	-	99	75.940	Gorilla_gorilla
ENSCVAG00000006034	mrps17	90	63.636	ENSGGOG00000044141	-	99	63.636	Gorilla_gorilla
ENSCVAG00000006034	mrps17	100	84.932	ENSHBUG00000006127	mrps17	100	84.932	Haplochromis_burtoni
ENSCVAG00000006034	mrps17	82	58.678	ENSHGLG00000010593	-	95	58.678	Heterocephalus_glaber_female
ENSCVAG00000006034	mrps17	90	75.000	ENSHGLG00100010825	-	98	75.000	Heterocephalus_glaber_male
ENSCVAG00000006034	mrps17	82	58.678	ENSHGLG00100012532	-	95	58.678	Heterocephalus_glaber_male
ENSCVAG00000006034	mrps17	86	76.000	ENSHCOG00000009491	mrps17	89	76.000	Hippocampus_comes
ENSCVAG00000006034	mrps17	96	75.000	ENSIPUG00000007844	MRPS17	100	75.000	Ictalurus_punctatus
ENSCVAG00000006034	mrps17	75	62.162	ENSJJAG00000022596	-	86	62.162	Jaculus_jaculus
ENSCVAG00000006034	mrps17	100	83.562	ENSKMAG00000006452	mrps17	100	83.562	Kryptolebias_marmoratus
ENSCVAG00000006034	mrps17	98	81.379	ENSLBEG00000000120	mrps17	99	81.379	Labrus_bergylta
ENSCVAG00000006034	mrps17	93	75.000	ENSLACG00000018908	mrps17	95	75.000	Latimeria_chalumnae
ENSCVAG00000006034	mrps17	96	76.429	ENSLOCG00000004118	mrps17	98	76.429	Lepisosteus_oculatus
ENSCVAG00000006034	mrps17	84	72.358	ENSLAFG00000027907	-	99	72.358	Loxodonta_africana
ENSCVAG00000006034	mrps17	90	75.940	ENSMFAG00000038594	-	99	75.940	Macaca_fascicularis
ENSCVAG00000006034	mrps17	90	71.429	ENSMMUG00000000585	-	75	71.429	Macaca_mulatta
ENSCVAG00000006034	mrps17	90	67.669	ENSMMUG00000041709	-	93	67.669	Macaca_mulatta
ENSCVAG00000006034	mrps17	90	75.940	ENSMNEG00000035442	-	99	75.940	Macaca_nemestrina
ENSCVAG00000006034	mrps17	90	75.188	ENSMLEG00000040782	-	99	75.188	Mandrillus_leucophaeus
ENSCVAG00000006034	mrps17	90	66.917	ENSMLEG00000011393	-	93	66.917	Mandrillus_leucophaeus
ENSCVAG00000006034	mrps17	98	83.448	ENSMAMG00000020981	mrps17	98	83.448	Mastacembelus_armatus
ENSCVAG00000006034	mrps17	100	84.932	ENSMZEG00005024876	mrps17	100	84.932	Maylandia_zebra
ENSCVAG00000006034	mrps17	90	73.881	ENSMGAG00000004317	-	98	73.881	Meleagris_gallopavo
ENSCVAG00000006034	mrps17	90	72.727	ENSMAUG00000021017	Mrps17	99	72.727	Mesocricetus_auratus
ENSCVAG00000006034	mrps17	90	73.485	ENSMICG00000046806	-	99	73.485	Microcebus_murinus
ENSCVAG00000006034	mrps17	76	67.857	ENSMOCG00000017721	-	85	67.857	Microtus_ochrogaster
ENSCVAG00000006034	mrps17	90	70.455	ENSMOCG00000008471	-	99	70.455	Microtus_ochrogaster
ENSCVAG00000006034	mrps17	96	84.507	ENSMMOG00000012804	mrps17	100	84.507	Mola_mola
ENSCVAG00000006034	mrps17	89	67.692	ENSMODG00000006523	-	98	67.692	Monodelphis_domestica
ENSCVAG00000006034	mrps17	96	85.714	ENSMALG00000018057	mrps17	97	85.714	Monopterus_albus
ENSCVAG00000006034	mrps17	89	68.462	MGP_CAROLIEiJ_G0027784	Mrps17	100	81.333	Mus_caroli
ENSCVAG00000006034	mrps17	89	68.462	ENSMUSG00000034211	Mrps17	100	81.333	Mus_musculus
ENSCVAG00000006034	mrps17	89	68.462	MGP_PahariEiJ_G0024399	Mrps17	100	81.333	Mus_pahari
ENSCVAG00000006034	mrps17	89	68.462	MGP_SPRETEiJ_G0028783	Mrps17	100	81.333	Mus_spretus
ENSCVAG00000006034	mrps17	90	71.970	ENSMPUG00000016230	-	69	71.970	Mustela_putorius_furo
ENSCVAG00000006034	mrps17	90	70.229	ENSMLUG00000016710	-	98	70.229	Myotis_lucifugus
ENSCVAG00000006034	mrps17	90	72.727	ENSNGAG00000020609	Mrps17	98	72.727	Nannospalax_galili
ENSCVAG00000006034	mrps17	100	84.247	ENSNBRG00000002238	mrps17	100	84.247	Neolamprologus_brichardi
ENSCVAG00000006034	mrps17	90	75.940	ENSNLEG00000032290	-	99	75.940	Nomascus_leucogenys
ENSCVAG00000006034	mrps17	73	74.766	ENSMEUG00000005143	-	83	74.766	Notamacropus_eugenii
ENSCVAG00000006034	mrps17	90	70.992	ENSOPRG00000009945	-	100	70.992	Ochotona_princeps
ENSCVAG00000006034	mrps17	72	74.528	ENSODEG00000015145	-	100	74.528	Octodon_degus
ENSCVAG00000006034	mrps17	90	61.069	ENSODEG00000006408	-	98	61.069	Octodon_degus
ENSCVAG00000006034	mrps17	90	73.485	ENSODEG00000017232	-	98	73.485	Octodon_degus
ENSCVAG00000006034	mrps17	90	59.091	ENSODEG00000004346	-	98	59.091	Octodon_degus
ENSCVAG00000006034	mrps17	90	74.242	ENSODEG00000018639	-	98	74.242	Octodon_degus
ENSCVAG00000006034	mrps17	78	66.957	ENSODEG00000014911	-	99	66.957	Octodon_degus
ENSCVAG00000006034	mrps17	100	84.247	ENSONIG00000008746	mrps17	100	84.247	Oreochromis_niloticus
ENSCVAG00000006034	mrps17	90	75.000	ENSOCUG00000024077	-	98	75.000	Oryctolagus_cuniculus
ENSCVAG00000006034	mrps17	90	75.000	ENSOCUG00000001767	-	93	75.000	Oryctolagus_cuniculus
ENSCVAG00000006034	mrps17	90	75.000	ENSOCUG00000027419	-	98	75.000	Oryctolagus_cuniculus
ENSCVAG00000006034	mrps17	99	84.828	ENSORLG00000002795	mrps17	99	84.828	Oryzias_latipes
ENSCVAG00000006034	mrps17	99	84.828	ENSORLG00020016792	mrps17	99	84.828	Oryzias_latipes_hni
ENSCVAG00000006034	mrps17	99	84.828	ENSORLG00015001149	mrps17	99	84.828	Oryzias_latipes_hsok
ENSCVAG00000006034	mrps17	99	82.069	ENSOMEG00000009095	mrps17	100	82.759	Oryzias_melastigma
ENSCVAG00000006034	mrps17	90	72.727	ENSOGAG00000010486	-	99	72.727	Otolemur_garnettii
ENSCVAG00000006034	mrps17	90	65.909	ENSOGAG00000009088	-	99	65.909	Otolemur_garnettii
ENSCVAG00000006034	mrps17	89	73.846	ENSOARG00000009925	-	86	73.846	Ovis_aries
ENSCVAG00000006034	mrps17	90	63.636	ENSPPAG00000038238	-	99	63.636	Pan_paniscus
ENSCVAG00000006034	mrps17	90	75.940	ENSPPAG00000036712	-	99	75.940	Pan_paniscus
ENSCVAG00000006034	mrps17	90	73.485	ENSPPRG00000000525	-	99	73.485	Panthera_pardus
ENSCVAG00000006034	mrps17	90	73.485	ENSPTIG00000019404	-	81	73.485	Panthera_tigris_altaica
ENSCVAG00000006034	mrps17	90	72.932	ENSPTRG00000046133	-	93	72.932	Pan_troglodytes
ENSCVAG00000006034	mrps17	90	75.940	ENSPTRG00000043904	-	99	75.940	Pan_troglodytes
ENSCVAG00000006034	mrps17	90	75.940	ENSPTRG00000019203	MRPS17	99	75.940	Pan_troglodytes
ENSCVAG00000006034	mrps17	90	64.394	ENSPTRG00000048604	-	99	64.394	Pan_troglodytes
ENSCVAG00000006034	mrps17	90	71.429	ENSPTRG00000051838	-	99	71.429	Pan_troglodytes
ENSCVAG00000006034	mrps17	81	61.017	ENSPANG00000030519	-	99	61.017	Papio_anubis
ENSCVAG00000006034	mrps17	90	76.692	ENSPANG00000015285	-	99	76.692	Papio_anubis
ENSCVAG00000006034	mrps17	88	71.318	ENSPKIG00000018389	mrps17	94	71.318	Paramormyrops_kingsleyae
ENSCVAG00000006034	mrps17	90	73.134	ENSPSIG00000013261	-	98	73.134	Pelodiscus_sinensis
ENSCVAG00000006034	mrps17	70	67.647	ENSPMAG00000006299	mrps17	66	67.647	Petromyzon_marinus
ENSCVAG00000006034	mrps17	100	82.877	ENSPFOG00000010719	mrps17	100	82.877	Poecilia_formosa
ENSCVAG00000006034	mrps17	100	82.877	ENSPLAG00000018054	mrps17	100	82.877	Poecilia_latipinna
ENSCVAG00000006034	mrps17	100	82.877	ENSPMEG00000014029	mrps17	100	82.877	Poecilia_mexicana
ENSCVAG00000006034	mrps17	100	81.507	ENSPREG00000009010	mrps17	100	81.507	Poecilia_reticulata
ENSCVAG00000006034	mrps17	90	75.940	ENSPPYG00000017547	-	99	75.940	Pongo_abelii
ENSCVAG00000006034	mrps17	90	72.727	ENSPCOG00000013668	-	99	72.727	Propithecus_coquereli
ENSCVAG00000006034	mrps17	62	72.527	ENSPCOG00000000608	-	82	72.527	Propithecus_coquereli
ENSCVAG00000006034	mrps17	90	71.756	ENSPVAG00000006305	-	98	71.756	Pteropus_vampyrus
ENSCVAG00000006034	mrps17	100	84.932	ENSPNYG00000018693	mrps17	100	84.932	Pundamilia_nyererei
ENSCVAG00000006034	mrps17	88	80.620	ENSPNAG00000015336	mrps17	89	74.830	Pygocentrus_nattereri
ENSCVAG00000006034	mrps17	88	65.909	ENSRNOG00000030847	AABR07012868.1	90	65.909	Rattus_norvegicus
ENSCVAG00000006034	mrps17	89	68.702	ENSRNOG00000000926	Mrps17	100	68.702	Rattus_norvegicus
ENSCVAG00000006034	mrps17	84	74.797	ENSRBIG00000032061	-	100	74.797	Rhinopithecus_bieti
ENSCVAG00000006034	mrps17	90	75.758	ENSRBIG00000032287	-	99	75.758	Rhinopithecus_bieti
ENSCVAG00000006034	mrps17	90	75.940	ENSRROG00000000039	-	99	75.940	Rhinopithecus_roxellana
ENSCVAG00000006034	mrps17	90	75.758	ENSRROG00000021955	-	99	75.758	Rhinopithecus_roxellana
ENSCVAG00000006034	mrps17	90	75.188	ENSSBOG00000025889	-	99	75.188	Saimiri_boliviensis_boliviensis
ENSCVAG00000006034	mrps17	90	64.885	ENSSBOG00000003355	-	98	64.885	Saimiri_boliviensis_boliviensis
ENSCVAG00000006034	mrps17	90	56.061	ENSSBOG00000030322	-	99	56.061	Saimiri_boliviensis_boliviensis
ENSCVAG00000006034	mrps17	86	70.866	ENSSHAG00000009749	-	96	70.866	Sarcophilus_harrisii
ENSCVAG00000006034	mrps17	92	73.134	ENSSFOG00015006180	mrps17	94	73.134	Scleropages_formosus
ENSCVAG00000006034	mrps17	98	81.507	ENSSMAG00000001680	mrps17	98	81.507	Scophthalmus_maximus
ENSCVAG00000006034	mrps17	99	83.673	ENSSDUG00000017736	mrps17	99	83.673	Seriola_dumerili
ENSCVAG00000006034	mrps17	99	83.673	ENSSLDG00000015517	mrps17	99	83.673	Seriola_lalandi_dorsalis
ENSCVAG00000006034	mrps17	90	75.373	ENSSPUG00000002623	-	98	75.373	Sphenodon_punctatus
ENSCVAG00000006034	mrps17	100	80.822	ENSSPAG00000008641	mrps17	100	80.822	Stegastes_partitus
ENSCVAG00000006034	mrps17	90	69.697	ENSSSCG00000007749	-	98	69.697	Sus_scrofa
ENSCVAG00000006034	mrps17	86	69.600	ENSSSCG00000034769	-	80	78.000	Sus_scrofa
ENSCVAG00000006034	mrps17	90	73.881	ENSTGUG00000005052	MRPS17	98	73.881	Taeniopygia_guttata
ENSCVAG00000006034	mrps17	100	81.081	ENSTRUG00000024068	mrps17	100	81.081	Takifugu_rubripes
ENSCVAG00000006034	mrps17	100	79.730	ENSTNIG00000016121	mrps17	100	79.730	Tetraodon_nigroviridis
ENSCVAG00000006034	mrps17	62	69.231	ENSTBEG00000007385	-	99	69.231	Tupaia_belangeri
ENSCVAG00000006034	mrps17	90	70.229	ENSTTRG00000015139	-	98	70.229	Tursiops_truncatus
ENSCVAG00000006034	mrps17	90	71.970	ENSUAMG00000002970	-	99	71.970	Ursus_americanus
ENSCVAG00000006034	mrps17	90	71.970	ENSUMAG00000015822	-	99	71.970	Ursus_maritimus
ENSCVAG00000006034	mrps17	90	72.727	ENSVVUG00000016664	-	99	72.727	Vulpes_vulpes
ENSCVAG00000006034	mrps17	88	72.868	ENSXETG00000010088	mrps17	91	72.868	Xenopus_tropicalis
ENSCVAG00000006034	mrps17	78	88.596	ENSXCOG00000009153	mrps17	89	88.596	Xiphophorus_couchianus
ENSCVAG00000006034	mrps17	100	86.301	ENSXMAG00000007366	mrps17	100	86.301	Xiphophorus_maculatus