EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000006043 (Gene tree)
Gene ID: 107084448
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein MEX3B-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 11717 bases
Position: chrKL652600.1:1310779-1322495
Accession: 107084448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004737	KH_1	PF00013.29	1.5e-25	1	2
ENSCVAP00000004737	KH_1	PF00013.29	1.5e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007854	-	5455	XM_015374303	ENSCVAP00000004737	663 (aa)	XP_015229789	UPI000742C66E

Gene Model

Click here to download ENSCVAG00000006043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000006043	-	53	78.788	ENSCVAG00000021251	MEX3D	61	75.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006043	-	99	82.242	ENSAPOG00000024248	-	100	81.951	Acanthochromis_polyacanthus
ENSCVAG00000006043	-	75	51.670	ENSAPOG00000006457	mex3b	97	51.961	Acanthochromis_polyacanthus
ENSCVAG00000006043	-	71	76.571	ENSACIG00000005655	-	95	68.996	Amphilophus_citrinellus
ENSCVAG00000006043	-	75	50.588	ENSACIG00000017783	mex3b	89	49.804	Amphilophus_citrinellus
ENSCVAG00000006043	-	75	50.491	ENSAOCG00000023903	mex3b	91	49.351	Amphiprion_ocellaris
ENSCVAG00000006043	-	99	82.387	ENSAOCG00000021347	-	100	82.096	Amphiprion_ocellaris
ENSCVAG00000006043	-	99	82.242	ENSAPEG00000003579	-	100	81.951	Amphiprion_percula
ENSCVAG00000006043	-	75	51.670	ENSAPEG00000000263	mex3b	91	49.084	Amphiprion_percula
ENSCVAG00000006043	-	75	52.182	ENSATEG00000012352	mex3b	91	50.370	Anabas_testudineus
ENSCVAG00000006043	-	99	76.170	ENSATEG00000015187	-	100	76.170	Anabas_testudineus
ENSCVAG00000006043	-	99	77.071	ENSACLG00000017634	-	100	77.219	Astatotilapia_calliptera
ENSCVAG00000006043	-	75	50.276	ENSACLG00000025776	mex3b	91	49.343	Astatotilapia_calliptera
ENSCVAG00000006043	-	82	49.296	ENSAMXG00000033615	mex3b	99	47.288	Astyanax_mexicanus
ENSCVAG00000006043	-	75	50.094	ENSCPBG00000007809	MEX3B	90	49.545	Chrysemys_picta_bellii
ENSCVAG00000006043	-	87	72.305	ENSCSEG00000006809	-	90	72.167	Cynoglossus_semilaevis
ENSCVAG00000006043	-	99	61.905	ENSCSEG00000011533	-	99	62.956	Cynoglossus_semilaevis
ENSCVAG00000006043	-	73	48.479	ENSCSEG00000005852	mex3b	89	47.601	Cynoglossus_semilaevis
ENSCVAG00000006043	-	77	50.642	ENSDARG00000058369	mex3b	93	50.092	Danio_rerio
ENSCVAG00000006043	-	53	64.000	ENSDNOG00000043628	MEX3B	58	65.449	Dasypus_novemcinctus
ENSCVAG00000006043	-	75	50.389	ENSEBUG00000007080	mex3b	88	49.805	Eptatretus_burgeri
ENSCVAG00000006043	-	80	48.587	ENSEBUG00000013015	mex3b	92	48.958	Eptatretus_burgeri
ENSCVAG00000006043	-	52	66.555	ENSELUG00000002503	mex3b	92	48.807	Esox_lucius
ENSCVAG00000006043	-	52	65.744	ENSFDAG00000018452	MEX3B	81	66.781	Fukomys_damarensis
ENSCVAG00000006043	-	99	86.364	ENSFHEG00000022740	-	100	87.683	Fundulus_heteroclitus
ENSCVAG00000006043	-	75	67.653	ENSGMOG00000005826	-	100	68.245	Gadus_morhua
ENSCVAG00000006043	-	50	83.756	ENSGALG00000032984	MEX3B	92	49.906	Gallus_gallus
ENSCVAG00000006043	-	93	86.719	ENSGAFG00000013694	-	98	87.031	Gambusia_affinis
ENSCVAG00000006043	-	75	72.556	ENSGACG00000007490	-	100	72.368	Gasterosteus_aculeatus
ENSCVAG00000006043	-	75	50.096	ENSGAGG00000022839	MEX3B	89	51.562	Gopherus_agassizii
ENSCVAG00000006043	-	99	77.139	ENSHBUG00000010552	-	100	77.286	Haplochromis_burtoni
ENSCVAG00000006043	-	75	50.276	ENSHBUG00000022683	mex3b	91	49.343	Haplochromis_burtoni
ENSCVAG00000006043	-	99	67.206	ENSHCOG00000010812	-	100	66.863	Hippocampus_comes
ENSCVAG00000006043	-	75	51.619	ENSIPUG00000023356	mex3b	90	50.969	Ictalurus_punctatus
ENSCVAG00000006043	-	100	79.619	ENSKMAG00000021181	MEX3B	100	81.938	Kryptolebias_marmoratus
ENSCVAG00000006043	-	86	73.899	ENSLBEG00000007607	-	91	75.083	Labrus_bergylta
ENSCVAG00000006043	-	77	48.609	ENSLACG00000015887	MEX3B	90	50.867	Latimeria_chalumnae
ENSCVAG00000006043	-	77	49.639	ENSLOCG00000012858	mex3b	90	49.634	Lepisosteus_oculatus
ENSCVAG00000006043	-	64	60.063	ENSLAFG00000006027	MEX3B	95	84.343	Loxodonta_africana
ENSCVAG00000006043	-	99	76.130	ENSMAMG00000001370	-	100	75.424	Mastacembelus_armatus
ENSCVAG00000006043	-	75	50.460	ENSMAMG00000011325	mex3b	91	51.132	Mastacembelus_armatus
ENSCVAG00000006043	-	75	50.276	ENSMZEG00005003082	mex3b	91	49.343	Maylandia_zebra
ENSCVAG00000006043	-	99	77.071	ENSMZEG00005004908	-	100	77.219	Maylandia_zebra
ENSCVAG00000006043	-	83	70.390	ENSMMOG00000000120	-	100	70.213	Mola_mola
ENSCVAG00000006043	-	86	77.740	ENSMALG00000009589	-	92	78.319	Monopterus_albus
ENSCVAG00000006043	-	75	47.993	ENSMALG00000010929	mex3b	70	49.146	Monopterus_albus
ENSCVAG00000006043	-	83	70.979	ENSNBRG00000012485	-	100	70.979	Neolamprologus_brichardi
ENSCVAG00000006043	-	75	50.276	ENSNBRG00000000526	mex3b	89	49.343	Neolamprologus_brichardi
ENSCVAG00000006043	-	81	77.677	ENSONIG00000015037	-	99	77.495	Oreochromis_niloticus
ENSCVAG00000006043	-	75	50.276	ENSONIG00000003391	mex3b	91	49.343	Oreochromis_niloticus
ENSCVAG00000006043	-	99	78.229	ENSORLG00000004985	-	100	77.649	Oryzias_latipes
ENSCVAG00000006043	-	99	79.009	ENSORLG00020020174	-	100	78.571	Oryzias_latipes_hni
ENSCVAG00000006043	-	99	79.155	ENSORLG00015008649	-	100	78.717	Oryzias_latipes_hsok
ENSCVAG00000006043	-	99	78.832	ENSOMEG00000023339	-	100	78.978	Oryzias_melastigma
ENSCVAG00000006043	-	75	50.954	ENSPKIG00000018385	mex3b	92	50.000	Paramormyrops_kingsleyae
ENSCVAG00000006043	-	75	50.297	ENSPKIG00000019969	-	90	51.176	Paramormyrops_kingsleyae
ENSCVAG00000006043	-	75	50.195	ENSPSIG00000007979	MEX3B	90	49.245	Pelodiscus_sinensis
ENSCVAG00000006043	-	75	49.425	ENSPMGG00000015808	mex3b	50	68.421	Periophthalmus_magnuspinnatus
ENSCVAG00000006043	-	81	66.239	ENSPMGG00000017559	-	97	64.572	Periophthalmus_magnuspinnatus
ENSCVAG00000006043	-	75	41.556	ENSPMAG00000000125	mex3b	99	40.525	Petromyzon_marinus
ENSCVAG00000006043	-	100	88.106	ENSPFOG00000018999	-	100	88.546	Poecilia_formosa
ENSCVAG00000006043	-	100	88.399	ENSPLAG00000002303	-	100	88.840	Poecilia_latipinna
ENSCVAG00000006043	-	100	87.665	ENSPMEG00000006448	-	100	88.106	Poecilia_mexicana
ENSCVAG00000006043	-	100	88.270	ENSPREG00000018559	-	100	88.270	Poecilia_reticulata
ENSCVAG00000006043	-	99	76.844	ENSPNYG00000010418	-	100	76.991	Pundamilia_nyererei
ENSCVAG00000006043	-	75	50.276	ENSPNYG00000019384	mex3b	88	49.343	Pundamilia_nyererei
ENSCVAG00000006043	-	84	47.892	ENSPNAG00000002109	mex3b	86	66.316	Pygocentrus_nattereri
ENSCVAG00000006043	-	52	66.197	ENSSFOG00015016308	mex3b	69	65.141	Scleropages_formosus
ENSCVAG00000006043	-	75	45.750	ENSSFOG00015016667	mex3b	87	47.940	Scleropages_formosus
ENSCVAG00000006043	-	75	50.188	ENSSMAG00000017078	mex3b	91	49.715	Scophthalmus_maximus
ENSCVAG00000006043	-	73	79.778	ENSSMAG00000001075	-	100	80.444	Scophthalmus_maximus
ENSCVAG00000006043	-	99	80.029	ENSSDUG00000022255	-	100	80.608	Seriola_dumerili
ENSCVAG00000006043	-	75	51.128	ENSSDUG00000013254	mex3b	91	50.189	Seriola_dumerili
ENSCVAG00000006043	-	75	51.128	ENSSLDG00000014620	mex3b	91	50.566	Seriola_lalandi_dorsalis
ENSCVAG00000006043	-	99	79.281	ENSSLDG00000024917	-	100	79.856	Seriola_lalandi_dorsalis
ENSCVAG00000006043	-	93	79.091	ENSSPAG00000002581	-	96	78.939	Stegastes_partitus
ENSCVAG00000006043	-	75	51.287	ENSSPAG00000011854	mex3b	90	51.976	Stegastes_partitus
ENSCVAG00000006043	-	99	75.256	ENSTRUG00000011888	-	100	75.403	Takifugu_rubripes
ENSCVAG00000006043	-	75	50.674	ENSTRUG00000000367	mex3b	92	50.000	Takifugu_rubripes
ENSCVAG00000006043	-	75	51.852	ENSTNIG00000003398	mex3b	90	51.267	Tetraodon_nigroviridis
ENSCVAG00000006043	-	75	49.805	ENSXETG00000027601	mex3b	89	49.805	Xenopus_tropicalis
ENSCVAG00000006043	-	81	82.299	ENSXCOG00000005190	-	99	82.664	Xiphophorus_couchianus
ENSCVAG00000006043	-	100	88.253	ENSXMAG00000015283	-	100	88.693	Xiphophorus_maculatus