EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000006083 (Gene tree)
Gene ID: 107096097
Gene Symbol: si:cabz01085950.1
Alias: -
Full Name: RAS like estrogen regulated growth inhibitor
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 68578 bases
Position: chrKL653098.1:395262-463839
Accession: 107096097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004752	MMR_HSR1	PF01926.23	2.6e-05	1	1
ENSCVAP00000004755	MMR_HSR1	PF01926.23	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007818	-	3249	XM_015392600	ENSCVAP00000004755	200 (aa)	XP_015248086	UPI000742A7DC
ENSCVAT00000007826	-	3149	-	ENSCVAP00000004752	200 (aa)	-	UPI000742A7DC
ENSCVAT00000007844	-	621	-	ENSCVAP00000004741	206 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000006083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000006083	si:cabz01085950.1	97	32.487	ENSCVAG00000009222	zgc:171927	87	32.487
ENSCVAG00000006083	si:cabz01085950.1	72	34.459	ENSCVAG00000001618	rab41	69	34.459
ENSCVAG00000006083	si:cabz01085950.1	82	34.545	ENSCVAG00000019751	-	74	34.545
ENSCVAG00000006083	si:cabz01085950.1	71	31.757	ENSCVAG00000019227	zgc:101559	62	31.757
ENSCVAG00000006083	si:cabz01085950.1	72	31.757	ENSCVAG00000018433	rab22a	75	31.757
ENSCVAG00000006083	si:cabz01085950.1	71	34.722	ENSCVAG00000020016	rab11al	66	34.722
ENSCVAG00000006083	si:cabz01085950.1	71	32.432	ENSCVAG00000011665	rab33a	53	32.432
ENSCVAG00000006083	si:cabz01085950.1	83	31.548	ENSCVAG00000008126	-	78	31.548
ENSCVAG00000006083	si:cabz01085950.1	84	30.058	ENSCVAG00000000281	RAB7A	82	30.058
ENSCVAG00000006083	si:cabz01085950.1	91	38.947	ENSCVAG00000013135	rasl11a	74	38.947
ENSCVAG00000006083	si:cabz01085950.1	84	43.452	ENSCVAG00000008670	hrasb	87	43.452
ENSCVAG00000006083	si:cabz01085950.1	84	32.184	ENSCVAG00000002953	RAB9A	86	32.184
ENSCVAG00000006083	si:cabz01085950.1	71	34.932	ENSCVAG00000012889	rab6ba	69	34.932
ENSCVAG00000006083	si:cabz01085950.1	82	30.952	ENSCVAG00000022799	-	81	30.952
ENSCVAG00000006083	si:cabz01085950.1	83	43.373	ENSCVAG00000006062	KRAS	96	41.848
ENSCVAG00000006083	si:cabz01085950.1	82	32.530	ENSCVAG00000020003	rab25b	82	31.928
ENSCVAG00000006083	si:cabz01085950.1	72	33.562	ENSCVAG00000008239	rab5aa	67	33.562
ENSCVAG00000006083	si:cabz01085950.1	86	36.000	ENSCVAG00000017623	rab2a	80	36.000
ENSCVAG00000006083	si:cabz01085950.1	83	34.132	ENSCVAG00000003537	si:dkey-16l2.16	82	34.091
ENSCVAG00000006083	si:cabz01085950.1	98	30.964	ENSCVAG00000014662	-	94	30.964
ENSCVAG00000006083	si:cabz01085950.1	71	34.722	ENSCVAG00000012806	rab35b	92	32.447
ENSCVAG00000006083	si:cabz01085950.1	84	30.058	ENSCVAG00000005429	-	82	30.058
ENSCVAG00000006083	si:cabz01085950.1	86	34.831	ENSCVAG00000008276	RAB15	90	35.965
ENSCVAG00000006083	si:cabz01085950.1	84	34.320	ENSCVAG00000004027	rheb	91	34.320
ENSCVAG00000006083	si:cabz01085950.1	84	44.048	ENSCVAG00000008389	si:ch73-116o1.2	85	41.573
ENSCVAG00000006083	si:cabz01085950.1	83	32.353	ENSCVAG00000018085	rab30	81	32.353
ENSCVAG00000006083	si:cabz01085950.1	82	34.320	ENSCVAG00000015862	-	77	34.320
ENSCVAG00000006083	si:cabz01085950.1	88	33.146	ENSCVAG00000013878	rab11a	81	33.146
ENSCVAG00000006083	si:cabz01085950.1	75	30.128	ENSCVAG00000001150	si:dkey-13a21.4	76	30.128
ENSCVAG00000006083	si:cabz01085950.1	82	33.728	ENSCVAG00000014915	RAB39B	77	33.728
ENSCVAG00000006083	si:cabz01085950.1	93	32.474	ENSCVAG00000022649	-	95	32.474
ENSCVAG00000006083	si:cabz01085950.1	81	34.545	ENSCVAG00000010727	rab4a	75	34.545
ENSCVAG00000006083	si:cabz01085950.1	82	34.545	ENSCVAG00000017021	-	74	34.545
ENSCVAG00000006083	si:cabz01085950.1	72	32.877	ENSCVAG00000009550	rab5c	66	32.877
ENSCVAG00000006083	si:cabz01085950.1	82	30.952	ENSCVAG00000022585	-	80	30.952
ENSCVAG00000006083	si:cabz01085950.1	81	31.707	ENSCVAG00000015451	rab18a	79	31.707
ENSCVAG00000006083	si:cabz01085950.1	82	34.545	ENSCVAG00000019718	-	74	34.545
ENSCVAG00000006083	si:cabz01085950.1	73	32.432	ENSCVAG00000020501	rab23	72	33.108
ENSCVAG00000006083	si:cabz01085950.1	94	31.606	ENSCVAG00000016312	rab9a	88	31.606
ENSCVAG00000006083	si:cabz01085950.1	71	34.932	ENSCVAG00000004751	rab6bb	69	34.932
ENSCVAG00000006083	si:cabz01085950.1	81	32.530	ENSCVAG00000014416	-	77	32.530
ENSCVAG00000006083	si:cabz01085950.1	82	37.805	ENSCVAG00000001281	rhebl1	88	37.805
ENSCVAG00000006083	si:cabz01085950.1	87	33.708	ENSCVAG00000022249	rab6a	83	33.708
ENSCVAG00000006083	si:cabz01085950.1	82	30.952	ENSCVAG00000017064	si:dkey-34d22.5	75	30.952
ENSCVAG00000006083	si:cabz01085950.1	94	32.642	ENSCVAG00000004658	rasd4	92	32.642
ENSCVAG00000006083	si:cabz01085950.1	81	30.539	ENSCVAG00000021826	rab9b	82	30.539

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSG00000134533	RERG	100	89.474	Homo_sapiens
ENSCVAG00000006083	si:cabz01085950.1	100	97.500	ENSAPOG00000015680	-	100	97.500	Acanthochromis_polyacanthus
ENSCVAG00000006083	si:cabz01085950.1	100	97.000	ENSAOCG00000010160	si:cabz01085950.1	100	97.000	Amphiprion_ocellaris
ENSCVAG00000006083	si:cabz01085950.1	100	97.000	ENSAPEG00000018205	si:cabz01085950.1	100	97.000	Amphiprion_percula
ENSCVAG00000006083	si:cabz01085950.1	100	97.000	ENSATEG00000004893	si:cabz01085950.1	100	97.000	Anabas_testudineus
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSANAG00000034086	RERG	100	81.500	Aotus_nancymaae
ENSCVAG00000006083	si:cabz01085950.1	100	96.000	ENSACLG00000009103	si:cabz01085950.1	100	96.000	Astatotilapia_calliptera
ENSCVAG00000006083	si:cabz01085950.1	100	87.685	ENSAMXG00000033069	si:cabz01085950.1	100	87.685	Astyanax_mexicanus
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSBTAG00000002174	RERG	100	82.000	Bos_taurus
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSCJAG00000021602	RERG	100	81.500	Callithrix_jacchus
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSCAFG00000012854	RERG	100	82.000	Canis_familiaris
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSCAFG00020007046	RERG	100	82.000	Canis_lupus_dingo
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSCHIG00000011004	RERG	100	82.000	Capra_hircus
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSTSYG00000011437	RERG	100	82.000	Carlito_syrichta
ENSCVAG00000006083	si:cabz01085950.1	100	82.500	ENSCPOG00000000528	RERG	100	82.500	Cavia_porcellus
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSCCAG00000026139	RERG	100	82.000	Cebus_capucinus
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSCATG00000030178	RERG	100	81.500	Cercocebus_atys
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSCLAG00000016162	RERG	100	82.000	Chinchilla_lanigera
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSCSAG00000008360	RERG	100	81.500	Chlorocebus_sabaeus
ENSCVAG00000006083	si:cabz01085950.1	100	83.500	ENSCPBG00000028244	RERG	100	83.500	Chrysemys_picta_bellii
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSCANG00000040826	RERG	100	81.500	Colobus_angolensis_palliatus
ENSCVAG00000006083	si:cabz01085950.1	100	95.500	ENSCSEG00000015770	si:cabz01085950.1	100	95.500	Cynoglossus_semilaevis
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSDNOG00000043703	RERG	100	82.000	Dasypus_novemcinctus
ENSCVAG00000006083	si:cabz01085950.1	100	78.500	ENSETEG00000010802	RERG	100	78.500	Echinops_telfairi
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSEASG00005014613	RERG	100	82.000	Equus_asinus_asinus
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSECAG00000014358	RERG	100	82.000	Equus_caballus
ENSCVAG00000006083	si:cabz01085950.1	100	93.000	ENSELUG00000013666	si:cabz01085950.1	100	93.000	Esox_lucius
ENSCVAG00000006083	si:cabz01085950.1	100	83.000	ENSFCAG00000029875	RERG	100	83.000	Felis_catus
ENSCVAG00000006083	si:cabz01085950.1	100	80.100	ENSFDAG00000007662	RERG	100	80.100	Fukomys_damarensis
ENSCVAG00000006083	si:cabz01085950.1	100	97.500	ENSFHEG00000016504	si:cabz01085950.1	100	97.500	Fundulus_heteroclitus
ENSCVAG00000006083	si:cabz01085950.1	100	83.500	ENSGALG00000028186	RERG	100	83.500	Gallus_gallus
ENSCVAG00000006083	si:cabz01085950.1	100	95.500	ENSGACG00000019134	si:cabz01085950.1	100	95.500	Gasterosteus_aculeatus
ENSCVAG00000006083	si:cabz01085950.1	100	83.000	ENSGAGG00000021838	RERG	100	83.000	Gopherus_agassizii
ENSCVAG00000006083	si:cabz01085950.1	100	96.000	ENSHBUG00000011397	si:cabz01085950.1	100	96.000	Haplochromis_burtoni
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSHGLG00000018663	RERG	100	81.500	Heterocephalus_glaber_female
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSHGLG00100003290	RERG	100	81.500	Heterocephalus_glaber_male
ENSCVAG00000006083	si:cabz01085950.1	100	84.729	ENSIPUG00000005254	RERG	100	84.729	Ictalurus_punctatus
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSSTOG00000023505	RERG	100	82.000	Ictidomys_tridecemlineatus
ENSCVAG00000006083	si:cabz01085950.1	100	95.500	ENSKMAG00000003080	si:cabz01085950.1	100	95.500	Kryptolebias_marmoratus
ENSCVAG00000006083	si:cabz01085950.1	100	96.000	ENSLBEG00000027628	si:cabz01085950.1	100	96.000	Labrus_bergylta
ENSCVAG00000006083	si:cabz01085950.1	100	85.000	ENSLOCG00000016464	si:cabz01085950.1	100	85.000	Lepisosteus_oculatus
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSLAFG00000001217	RERG	100	81.500	Loxodonta_africana
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSMFAG00000041631	RERG	100	81.500	Macaca_fascicularis
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSMMUG00000010460	RERG	100	81.500	Macaca_mulatta
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSMNEG00000042410	RERG	100	81.500	Macaca_nemestrina
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSMLEG00000043731	RERG	100	81.500	Mandrillus_leucophaeus
ENSCVAG00000006083	si:cabz01085950.1	100	96.500	ENSMAMG00000001320	si:cabz01085950.1	85	96.500	Mastacembelus_armatus
ENSCVAG00000006083	si:cabz01085950.1	100	96.000	ENSMZEG00005018287	si:cabz01085950.1	100	96.000	Maylandia_zebra
ENSCVAG00000006083	si:cabz01085950.1	100	83.500	ENSMGAG00000013542	RERG	100	83.500	Meleagris_gallopavo
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSMICG00000006266	RERG	100	81.500	Microcebus_murinus
ENSCVAG00000006083	si:cabz01085950.1	100	97.000	ENSMMOG00000006335	si:cabz01085950.1	100	97.000	Mola_mola
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSMPUG00000011559	RERG	100	82.000	Mustela_putorius_furo
ENSCVAG00000006083	si:cabz01085950.1	100	81.000	ENSNGAG00000000037	Rerg	100	81.000	Nannospalax_galili
ENSCVAG00000006083	si:cabz01085950.1	100	70.500	ENSNLEG00000029492	RERG	100	70.500	Nomascus_leucogenys
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSOPRG00000015124	RERG	100	81.500	Ochotona_princeps
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSODEG00000009994	RERG	100	81.500	Octodon_degus
ENSCVAG00000006083	si:cabz01085950.1	100	96.000	ENSONIG00000009978	si:cabz01085950.1	100	96.000	Oreochromis_niloticus
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSOCUG00000000650	RERG	100	82.000	Oryctolagus_cuniculus
ENSCVAG00000006083	si:cabz01085950.1	100	96.000	ENSORLG00020005258	rerg	100	96.000	Oryzias_latipes_hni
ENSCVAG00000006083	si:cabz01085950.1	100	96.000	ENSORLG00015002284	rerg	100	96.000	Oryzias_latipes_hsok
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSOARG00000020676	RERG	100	82.000	Ovis_aries
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSPPAG00000004422	RERG	100	82.000	Pan_paniscus
ENSCVAG00000006083	si:cabz01085950.1	100	83.000	ENSPPRG00000003131	RERG	100	83.000	Panthera_pardus
ENSCVAG00000006083	si:cabz01085950.1	100	83.000	ENSPTIG00000008594	RERG	100	83.000	Panthera_tigris_altaica
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSPTRG00000004731	RERG	100	82.000	Pan_troglodytes
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSPANG00000005456	RERG	100	81.500	Papio_anubis
ENSCVAG00000006083	si:cabz01085950.1	100	83.000	ENSPKIG00000002719	si:cabz01085950.1	100	83.000	Paramormyrops_kingsleyae
ENSCVAG00000006083	si:cabz01085950.1	100	84.000	ENSPSIG00000003221	RERG	100	84.000	Pelodiscus_sinensis
ENSCVAG00000006083	si:cabz01085950.1	100	93.500	ENSPMGG00000004104	si:cabz01085950.1	100	93.500	Periophthalmus_magnuspinnatus
ENSCVAG00000006083	si:cabz01085950.1	100	68.317	ENSPMAG00000006671	si:cabz01085950.1	100	68.317	Petromyzon_marinus
ENSCVAG00000006083	si:cabz01085950.1	100	98.000	ENSPFOG00000008678	si:cabz01085950.1	100	98.000	Poecilia_formosa
ENSCVAG00000006083	si:cabz01085950.1	100	98.000	ENSPMEG00000011210	si:cabz01085950.1	100	98.000	Poecilia_mexicana
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSPPYG00000004331	RERG	100	81.500	Pongo_abelii
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSPVAG00000013319	RERG	100	82.000	Pteropus_vampyrus
ENSCVAG00000006083	si:cabz01085950.1	100	87.192	ENSPNAG00000028497	si:cabz01085950.1	100	87.192	Pygocentrus_nattereri
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSRBIG00000036581	RERG	100	81.500	Rhinopithecus_bieti
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSRROG00000042897	RERG	100	81.500	Rhinopithecus_roxellana
ENSCVAG00000006083	si:cabz01085950.1	100	82.500	ENSSBOG00000034195	RERG	100	82.500	Saimiri_boliviensis_boliviensis
ENSCVAG00000006083	si:cabz01085950.1	100	97.500	ENSSMAG00000014329	si:cabz01085950.1	100	97.500	Scophthalmus_maximus
ENSCVAG00000006083	si:cabz01085950.1	100	97.500	ENSSDUG00000014082	si:cabz01085950.1	100	97.500	Seriola_dumerili
ENSCVAG00000006083	si:cabz01085950.1	100	97.000	ENSSLDG00000013333	si:cabz01085950.1	100	97.000	Seriola_lalandi_dorsalis
ENSCVAG00000006083	si:cabz01085950.1	100	98.000	ENSSPAG00000018992	si:cabz01085950.1	100	98.000	Stegastes_partitus
ENSCVAG00000006083	si:cabz01085950.1	100	95.000	ENSTRUG00000023011	rerg	100	95.000	Takifugu_rubripes
ENSCVAG00000006083	si:cabz01085950.1	65	96.154	ENSTNIG00000006917	si:cabz01085950.1	100	96.154	Tetraodon_nigroviridis
ENSCVAG00000006083	si:cabz01085950.1	100	81.500	ENSTTRG00000015290	RERG	100	81.500	Tursiops_truncatus
ENSCVAG00000006083	si:cabz01085950.1	100	82.500	ENSUAMG00000010578	RERG	100	82.500	Ursus_americanus
ENSCVAG00000006083	si:cabz01085950.1	100	82.500	ENSUMAG00000002671	RERG	100	82.500	Ursus_maritimus
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSVPAG00000002449	RERG	100	82.000	Vicugna_pacos
ENSCVAG00000006083	si:cabz01085950.1	100	82.000	ENSVVUG00000004380	RERG	100	82.000	Vulpes_vulpes
ENSCVAG00000006083	si:cabz01085950.1	100	78.000	ENSXETG00000022517	rerg	100	78.000	Xenopus_tropicalis
ENSCVAG00000006083	si:cabz01085950.1	100	97.500	ENSXMAG00000024024	si:cabz01085950.1	100	97.500	Xiphophorus_maculatus