EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000006106 (Gene tree)
Gene ID: -
Gene Symbol: wdhd1
Alias: AND-1|wu:fa11f10|wu:fb77d12|zgc:92585
Full Name: WD repeat and HMG-box DNA binding protein 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 23036 bases
Position: chrKL652586.1:544625-567660
Accession: 107083883
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004513	eIF2A	PF08662.11	7.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008174	-	3195	XM_015373412	ENSCVAP00000004544	1064 (aa)	XP_015228898	-
ENSCVAT00000008213	-	957	-	ENSCVAP00000004513	318 (aa)	-	-
ENSCVAT00000008192	-	3108	-	ENSCVAP00000022878	1035 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000006106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006106's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006106	wdhd1	94	69.231	ENSG00000198554	WDHD1	100	77.381	Homo_sapiens
ENSCVAG00000006106	wdhd1	96	68.525	ENSAMXG00000043712	wdhd1	100	68.525	Astyanax_mexicanus
ENSCVAG00000006106	wdhd1	96	74.183	ENSDARG00000015998	wdhd1	100	74.183	Danio_rerio
ENSCVAG00000006106	wdhd1	95	56.954	ENSEASG00005003136	-	93	56.954	Equus_asinus_asinus
ENSCVAG00000006106	wdhd1	94	90.000	ENSFHEG00000009177	-	96	90.000	Fundulus_heteroclitus
ENSCVAG00000006106	wdhd1	94	90.635	ENSHBUG00000015846	-	98	90.635	Haplochromis_burtoni
ENSCVAG00000006106	wdhd1	92	86.395	ENSMZEG00005025682	-	94	86.288	Maylandia_zebra
ENSCVAG00000006106	wdhd1	84	71.536	ENSOANG00000015129	-	100	71.536	Ornithorhynchus_anatinus
ENSCVAG00000006106	wdhd1	60	81.250	ENSOMEG00000019072	wdhd1	67	81.250	Oryzias_melastigma
ENSCVAG00000006106	wdhd1	88	76.573	ENSPLAG00000009199	wdhd1	94	76.573	Poecilia_latipinna
ENSCVAG00000006106	wdhd1	99	87.302	ENSPNYG00000019115	wdhd1	99	87.302	Pundamilia_nyererei
ENSCVAG00000006106	wdhd1	94	89.298	ENSSLDG00000021689	wdhd1	93	89.298	Seriola_lalandi_dorsalis
ENSCVAG00000006106	wdhd1	97	67.427	ENSSPUG00000004721	-	96	67.427	Sphenodon_punctatus
ENSCVAG00000006106	wdhd1	92	87.415	ENSTRUG00000015390	-	95	86.957	Takifugu_rubripes
ENSCVAG00000006106	wdhd1	97	87.702	ENSXCOG00000000845	-	95	87.702	Xiphophorus_couchianus