EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000006168 (Gene tree)
Gene ID: 107084466
Gene Symbol: rasef
Alias: si:ch73-275j21.1
Full Name: RAS and EF-hand domain containing
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 25654 bases
Position: chrKL652600.1:1180888-1206541
Accession: 107084466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004869	MMR_HSR1	PF01926.23	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007637	-	5172	XM_015374352	ENSCVAP00000004869	819 (aa)	XP_015229838	UPI000742A024

Gene Model

Click here to download ENSCVAG00000006168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006168's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000006168	rasef	61	42.564	ENSCVAG00000013782	CRACR2A	75	42.564
ENSCVAG00000006168	rasef	95	37.349	ENSCVAG00000014510	zgc:162879	99	37.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006168	rasef	93	51.667	ENSG00000165105	RASEF	99	51.715	Homo_sapiens
ENSCVAG00000006168	rasef	92	76.444	ENSAPOG00000024369	rasef	100	81.348	Acanthochromis_polyacanthus
ENSCVAG00000006168	rasef	91	53.217	ENSAMEG00000009467	RASEF	98	53.217	Ailuropoda_melanoleuca
ENSCVAG00000006168	rasef	93	73.304	ENSACIG00000005549	rasef	98	73.599	Amphilophus_citrinellus
ENSCVAG00000006168	rasef	95	76.445	ENSAOCG00000011464	rasef	96	76.445	Amphiprion_ocellaris
ENSCVAG00000006168	rasef	96	82.073	ENSAPEG00000003461	rasef	100	82.073	Amphiprion_percula
ENSCVAG00000006168	rasef	93	81.832	ENSATEG00000015032	rasef	100	81.832	Anabas_testudineus
ENSCVAG00000006168	rasef	74	53.871	ENSAPLG00000013969	RASEF	95	53.871	Anas_platyrhynchos
ENSCVAG00000006168	rasef	94	53.125	ENSACAG00000002155	RASEF	99	53.125	Anolis_carolinensis
ENSCVAG00000006168	rasef	93	51.786	ENSANAG00000035226	RASEF	99	51.583	Aotus_nancymaae
ENSCVAG00000006168	rasef	96	82.700	ENSACLG00000017818	rasef	100	82.419	Astatotilapia_calliptera
ENSCVAG00000006168	rasef	94	58.621	ENSAMXG00000011411	rasef	99	58.621	Astyanax_mexicanus
ENSCVAG00000006168	rasef	93	52.855	ENSBTAG00000021751	RASEF	98	52.674	Bos_taurus
ENSCVAG00000006168	rasef	93	51.783	ENSCJAG00000003547	RASEF	98	51.926	Callithrix_jacchus
ENSCVAG00000006168	rasef	91	55.836	ENSCAFG00000001453	RASEF	92	51.480	Canis_familiaris
ENSCVAG00000006168	rasef	90	55.994	ENSCAFG00020023859	RASEF	99	52.375	Canis_lupus_dingo
ENSCVAG00000006168	rasef	92	52.727	ENSCHIG00000020336	RASEF	96	55.200	Capra_hircus
ENSCVAG00000006168	rasef	64	54.312	ENSTSYG00000006987	RASEF	99	54.312	Carlito_syrichta
ENSCVAG00000006168	rasef	62	47.665	ENSCAPG00000010585	-	99	48.249	Cavia_aperea
ENSCVAG00000006168	rasef	74	53.571	ENSCPOG00000005004	RASEF	99	53.571	Cavia_porcellus
ENSCVAG00000006168	rasef	92	53.571	ENSCCAG00000031624	RASEF	98	52.470	Cebus_capucinus
ENSCVAG00000006168	rasef	53	47.633	ENSCLAG00000004622	-	90	47.337	Chinchilla_lanigera
ENSCVAG00000006168	rasef	93	52.533	ENSCSAG00000007663	RASEF	98	52.533	Chlorocebus_sabaeus
ENSCVAG00000006168	rasef	72	55.189	ENSCHOG00000001831	RASEF	96	55.189	Choloepus_hoffmanni
ENSCVAG00000006168	rasef	95	53.030	ENSCPBG00000019037	RASEF	99	53.070	Chrysemys_picta_bellii
ENSCVAG00000006168	rasef	92	53.571	ENSCANG00000034081	RASEF	98	52.058	Colobus_angolensis_palliatus
ENSCVAG00000006168	rasef	73	53.834	ENSCGRG00001001324	Rasef	99	53.834	Cricetulus_griseus_chok1gshd
ENSCVAG00000006168	rasef	69	53.287	ENSCGRG00000006455	Rasef	99	53.287	Cricetulus_griseus_crigri
ENSCVAG00000006168	rasef	90	67.477	ENSCSEG00000017898	rasef	93	67.835	Cynoglossus_semilaevis
ENSCVAG00000006168	rasef	93	61.290	ENSDARG00000076250	rasef	99	61.290	Danio_rerio
ENSCVAG00000006168	rasef	94	52.208	ENSDNOG00000006002	RASEF	91	52.208	Dasypus_novemcinctus
ENSCVAG00000006168	rasef	68	53.415	ENSDORG00000015570	Rasef	99	53.333	Dipodomys_ordii
ENSCVAG00000006168	rasef	89	45.902	ENSEBUG00000012629	rasef	96	45.902	Eptatretus_burgeri
ENSCVAG00000006168	rasef	72	37.002	ENSEBUG00000012179	rasef	99	37.002	Eptatretus_burgeri
ENSCVAG00000006168	rasef	93	54.495	ENSEASG00005015967	RASEF	99	54.333	Equus_asinus_asinus
ENSCVAG00000006168	rasef	94	53.846	ENSECAG00000000324	RASEF	98	54.808	Equus_caballus
ENSCVAG00000006168	rasef	70	49.486	ENSEEUG00000008455	RASEF	99	49.486	Erinaceus_europaeus
ENSCVAG00000006168	rasef	93	53.113	ENSFCAG00000002416	RASEF	98	53.262	Felis_catus
ENSCVAG00000006168	rasef	74	54.984	ENSFALG00000003611	RASEF	99	54.984	Ficedula_albicollis
ENSCVAG00000006168	rasef	74	55.447	ENSFDAG00000013428	RASEF	99	55.592	Fukomys_damarensis
ENSCVAG00000006168	rasef	96	81.382	ENSFHEG00000022470	rasef	95	81.382	Fundulus_heteroclitus
ENSCVAG00000006168	rasef	82	85.965	ENSGMOG00000010090	rasef	100	82.967	Gadus_morhua
ENSCVAG00000006168	rasef	94	54.688	ENSGALG00000012576	RASEF	99	54.688	Gallus_gallus
ENSCVAG00000006168	rasef	98	88.811	ENSGAFG00000013735	rasef	99	88.811	Gambusia_affinis
ENSCVAG00000006168	rasef	94	76.653	ENSGACG00000007528	rasef	100	76.653	Gasterosteus_aculeatus
ENSCVAG00000006168	rasef	94	52.893	ENSGAGG00000007338	RASEF	99	53.444	Gopherus_agassizii
ENSCVAG00000006168	rasef	93	51.667	ENSGGOG00000006651	RASEF	99	51.667	Gorilla_gorilla
ENSCVAG00000006168	rasef	100	79.126	ENSHBUG00000010345	rasef	100	78.935	Haplochromis_burtoni
ENSCVAG00000006168	rasef	93	52.653	ENSHGLG00000000399	RASEF	98	52.925	Heterocephalus_glaber_female
ENSCVAG00000006168	rasef	74	55.302	ENSHGLG00100008043	RASEF	99	55.302	Heterocephalus_glaber_male
ENSCVAG00000006168	rasef	84	80.203	ENSHCOG00000010976	rasef	99	63.143	Hippocampus_comes
ENSCVAG00000006168	rasef	94	53.762	ENSIPUG00000008768	rasef	98	53.762	Ictalurus_punctatus
ENSCVAG00000006168	rasef	92	52.727	ENSSTOG00000004311	RASEF	98	51.837	Ictidomys_tridecemlineatus
ENSCVAG00000006168	rasef	74	55.645	ENSJJAG00000023215	Rasef	99	55.645	Jaculus_jaculus
ENSCVAG00000006168	rasef	100	74.344	ENSKMAG00000021106	rasef	100	74.344	Kryptolebias_marmoratus
ENSCVAG00000006168	rasef	94	78.223	ENSLBEG00000021098	-	99	68.946	Labrus_bergylta
ENSCVAG00000006168	rasef	95	54.321	ENSLACG00000010849	RASEF	99	54.458	Latimeria_chalumnae
ENSCVAG00000006168	rasef	93	60.166	ENSLOCG00000002094	rasef	98	60.166	Lepisosteus_oculatus
ENSCVAG00000006168	rasef	74	54.516	ENSLAFG00000010552	RASEF	99	54.516	Loxodonta_africana
ENSCVAG00000006168	rasef	93	52.459	ENSMFAG00000046414	RASEF	98	52.459	Macaca_fascicularis
ENSCVAG00000006168	rasef	93	51.720	ENSMNEG00000044341	RASEF	98	51.720	Macaca_nemestrina
ENSCVAG00000006168	rasef	93	51.926	ENSMLEG00000034579	RASEF	98	51.926	Mandrillus_leucophaeus
ENSCVAG00000006168	rasef	83	80.325	ENSMAMG00000001536	rasef	96	80.813	Mastacembelus_armatus
ENSCVAG00000006168	rasef	93	71.471	ENSMZEG00005004819	rasef	99	71.176	Maylandia_zebra
ENSCVAG00000006168	rasef	74	55.178	ENSMAUG00000010820	Rasef	99	55.178	Mesocricetus_auratus
ENSCVAG00000006168	rasef	82	55.696	ENSMICG00000011836	RASEF	98	52.610	Microcebus_murinus
ENSCVAG00000006168	rasef	74	54.472	ENSMOCG00000000943	Rasef	99	53.899	Microtus_ochrogaster
ENSCVAG00000006168	rasef	92	70.414	ENSMMOG00000000102	rasef	96	71.746	Mola_mola
ENSCVAG00000006168	rasef	94	60.938	ENSMODG00000009037	RASEF	99	54.930	Monodelphis_domestica
ENSCVAG00000006168	rasef	96	74.929	ENSMALG00000009830	rasef	100	74.504	Monopterus_albus
ENSCVAG00000006168	rasef	76	54.088	MGP_CAROLIEiJ_G0026109	Rasef	99	54.671	Mus_caroli
ENSCVAG00000006168	rasef	94	53.527	ENSMUSG00000043003	Rasef	99	54.593	Mus_musculus
ENSCVAG00000006168	rasef	75	54.153	MGP_PahariEiJ_G0028447	Rasef	99	54.419	Mus_pahari
ENSCVAG00000006168	rasef	75	55.024	MGP_SPRETEiJ_G0027075	Rasef	99	54.844	Mus_spretus
ENSCVAG00000006168	rasef	69	53.448	ENSMPUG00000013070	RASEF	99	53.448	Mustela_putorius_furo
ENSCVAG00000006168	rasef	89	54.545	ENSMLUG00000013108	RASEF	98	52.459	Myotis_lucifugus
ENSCVAG00000006168	rasef	69	55.726	ENSNGAG00000014878	Rasef	99	55.726	Nannospalax_galili
ENSCVAG00000006168	rasef	93	61.119	ENSNBRG00000012335	rasef	99	60.825	Neolamprologus_brichardi
ENSCVAG00000006168	rasef	93	51.715	ENSNLEG00000003245	RASEF	99	51.847	Nomascus_leucogenys
ENSCVAG00000006168	rasef	93	60.656	ENSMEUG00000016412	RASEF	98	54.412	Notamacropus_eugenii
ENSCVAG00000006168	rasef	80	53.448	ENSOPRG00000002742	-	80	53.448	Ochotona_princeps
ENSCVAG00000006168	rasef	100	79.587	ENSONIG00000015021	rasef	100	79.636	Oreochromis_niloticus
ENSCVAG00000006168	rasef	93	55.738	ENSOANG00000010379	RASEF	99	50.787	Ornithorhynchus_anatinus
ENSCVAG00000006168	rasef	92	52.727	ENSOCUG00000001548	RASEF	99	51.647	Oryctolagus_cuniculus
ENSCVAG00000006168	rasef	100	77.482	ENSORLG00000005076	rasef	100	77.603	Oryzias_latipes
ENSCVAG00000006168	rasef	100	77.482	ENSORLG00020020049	rasef	100	77.482	Oryzias_latipes_hni
ENSCVAG00000006168	rasef	99	78.405	ENSORLG00015008479	rasef	100	77.724	Oryzias_latipes_hsok
ENSCVAG00000006168	rasef	100	78.277	ENSOMEG00000023457	rasef	99	83.111	Oryzias_melastigma
ENSCVAG00000006168	rasef	74	55.323	ENSOGAG00000012724	RASEF	99	55.323	Otolemur_garnettii
ENSCVAG00000006168	rasef	94	52.727	ENSOARG00000009073	RASEF	95	51.358	Ovis_aries
ENSCVAG00000006168	rasef	93	53.134	ENSPPAG00000042152	RASEF	99	53.542	Pan_paniscus
ENSCVAG00000006168	rasef	92	53.571	ENSPPRG00000008487	RASEF	98	52.785	Panthera_pardus
ENSCVAG00000006168	rasef	76	56.309	ENSPTIG00000006676	RASEF	96	54.190	Panthera_tigris_altaica
ENSCVAG00000006168	rasef	93	53.134	ENSPTRG00000021052	RASEF	99	53.542	Pan_troglodytes
ENSCVAG00000006168	rasef	93	51.926	ENSPANG00000024899	RASEF	98	51.926	Papio_anubis
ENSCVAG00000006168	rasef	75	53.994	ENSPSIG00000017699	RASEF	96	54.200	Pelodiscus_sinensis
ENSCVAG00000006168	rasef	94	57.873	ENSPMGG00000015499	rasef	86	93.137	Periophthalmus_magnuspinnatus
ENSCVAG00000006168	rasef	74	54.870	ENSPEMG00000002797	Rasef	99	54.870	Peromyscus_maniculatus_bairdii
ENSCVAG00000006168	rasef	82	39.672	ENSPMAG00000001634	rasef	98	39.672	Petromyzon_marinus
ENSCVAG00000006168	rasef	94	60.938	ENSPCIG00000027655	RASEF	99	54.930	Phascolarctos_cinereus
ENSCVAG00000006168	rasef	98	81.522	ENSPFOG00000018924	rasef	100	81.522	Poecilia_formosa
ENSCVAG00000006168	rasef	73	76.783	ENSPLAG00000022907	RASEF	97	76.783	Poecilia_latipinna
ENSCVAG00000006168	rasef	96	90.085	ENSPMEG00000006546	rasef	100	90.085	Poecilia_mexicana
ENSCVAG00000006168	rasef	100	86.336	ENSPREG00000018728	rasef	100	86.578	Poecilia_reticulata
ENSCVAG00000006168	rasef	94	51.715	ENSPPYG00000019320	RASEF	99	51.583	Pongo_abelii
ENSCVAG00000006168	rasef	92	55.357	ENSPCOG00000022979	RASEF	98	52.778	Propithecus_coquereli
ENSCVAG00000006168	rasef	90	56.250	ENSPVAG00000003682	RASEF	99	52.569	Pteropus_vampyrus
ENSCVAG00000006168	rasef	93	78.070	ENSPNYG00000010579	rasef	95	77.924	Pundamilia_nyererei
ENSCVAG00000006168	rasef	96	56.371	ENSPNAG00000016447	rasef	99	56.371	Pygocentrus_nattereri
ENSCVAG00000006168	rasef	94	53.389	ENSRNOG00000024190	Rasef	99	53.389	Rattus_norvegicus
ENSCVAG00000006168	rasef	92	53.571	ENSRBIG00000039516	RASEF	98	51.852	Rhinopithecus_bieti
ENSCVAG00000006168	rasef	88	55.357	ENSRROG00000044397	RASEF	98	52.901	Rhinopithecus_roxellana
ENSCVAG00000006168	rasef	87	55.329	ENSSBOG00000029298	RASEF	89	55.329	Saimiri_boliviensis_boliviensis
ENSCVAG00000006168	rasef	94	58.117	ENSSFOG00015009014	rasef	99	58.117	Scleropages_formosus
ENSCVAG00000006168	rasef	96	79.694	ENSSMAG00000000942	rasef	99	79.833	Scophthalmus_maximus
ENSCVAG00000006168	rasef	84	77.574	ENSSDUG00000022228	rasef	93	77.574	Seriola_dumerili
ENSCVAG00000006168	rasef	100	75.956	ENSSLDG00000001784	rasef	100	76.942	Seriola_lalandi_dorsalis
ENSCVAG00000006168	rasef	94	54.237	ENSSPUG00000002899	RASEF	99	52.011	Sphenodon_punctatus
ENSCVAG00000006168	rasef	100	76.969	ENSSPAG00000002442	rasef	100	76.548	Stegastes_partitus
ENSCVAG00000006168	rasef	76	56.487	ENSSSCG00000040707	-	92	56.487	Sus_scrofa
ENSCVAG00000006168	rasef	95	54.688	ENSTGUG00000003216	RASEF	99	54.688	Taeniopygia_guttata
ENSCVAG00000006168	rasef	96	78.169	ENSTRUG00000011541	rasef	99	78.028	Takifugu_rubripes
ENSCVAG00000006168	rasef	96	69.415	ENSTNIG00000006010	rasef	99	69.415	Tetraodon_nigroviridis
ENSCVAG00000006168	rasef	92	55.357	ENSTTRG00000002061	RASEF	98	52.459	Tursiops_truncatus
ENSCVAG00000006168	rasef	92	53.825	ENSUAMG00000021591	RASEF	97	55.305	Ursus_americanus
ENSCVAG00000006168	rasef	74	55.788	ENSUMAG00000004670	RASEF	94	55.788	Ursus_maritimus
ENSCVAG00000006168	rasef	74	55.754	ENSVVUG00000029736	RASEF	97	55.574	Vulpes_vulpes
ENSCVAG00000006168	rasef	95	50.538	ENSXETG00000016758	mgc147600	96	51.389	Xenopus_tropicalis
ENSCVAG00000006168	rasef	73	66.116	ENSXCOG00000005178	rasef	86	66.116	Xiphophorus_couchianus
ENSCVAG00000006168	rasef	96	89.943	ENSXMAG00000015129	rasef	100	89.943	Xiphophorus_maculatus