EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000006251 (Gene tree)
Gene ID: 107095117
Gene Symbol: tufm
Alias: fi06f04|wu:fi06f04|zgc:110766
Full Name: Tu translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 8765 bases
Position: chrKL653025.1:64022-72786
Accession: 107095117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000023120	GTP_EFTU	PF00009.27	2.4e-55	1	1
ENSCVAP00000023125	GTP_EFTU	PF00009.27	2.9e-55	1	1
ENSCVAP00000023120	GTP_EFTU_D2	PF03144.25	1.2e-15	1	1
ENSCVAP00000023125	GTP_EFTU_D2	PF03144.25	1.4e-15	1	1
ENSCVAP00000023120	GTP_EFTU_D3	PF03143.17	2.2e-25	1	1
ENSCVAP00000023125	GTP_EFTU_D3	PF03143.17	2.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007550	-	1647	XM_015391089	ENSCVAP00000023125	446 (aa)	XP_015246575	UPI00074262E7
ENSCVAT00000007565	-	1272	-	ENSCVAP00000023120	423 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000006251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006251's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000006251	tufm	88	30.275	ENSCVAG00000019356	-	86	30.275
ENSCVAG00000006251	tufm	79	31.383	ENSCVAG00000021241	-	86	31.383
ENSCVAG00000006251	tufm	94	30.786	ENSCVAG00000009828	si:dkey-37o8.1	98	31.004

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006251	tufm	97	77.913	ENSG00000178952	TUFM	99	74.336	Homo_sapiens
ENSCVAG00000006251	tufm	100	96.637	ENSAPOG00000013385	tufm	100	96.637	Acanthochromis_polyacanthus
ENSCVAG00000006251	tufm	98	78.520	ENSAMEG00000015551	TUFM	94	77.412	Ailuropoda_melanoleuca
ENSCVAG00000006251	tufm	98	94.737	ENSACIG00000007388	tufm	99	92.610	Amphilophus_citrinellus
ENSCVAG00000006251	tufm	100	96.637	ENSAOCG00000001032	tufm	100	96.637	Amphiprion_ocellaris
ENSCVAG00000006251	tufm	100	96.637	ENSAPEG00000015751	tufm	100	96.637	Amphiprion_percula
ENSCVAG00000006251	tufm	100	94.395	ENSATEG00000002905	tufm	97	94.395	Anabas_testudineus
ENSCVAG00000006251	tufm	96	81.951	ENSACAG00000005399	TUFM	97	77.009	Anolis_carolinensis
ENSCVAG00000006251	tufm	98	75.656	ENSANAG00000022206	TUFM	99	72.506	Aotus_nancymaae
ENSCVAG00000006251	tufm	100	96.413	ENSACLG00000007403	tufm	93	96.413	Astatotilapia_calliptera
ENSCVAG00000006251	tufm	98	78.282	ENSBTAG00000019216	TUFM	99	74.945	Bos_taurus
ENSCVAG00000006251	tufm	94	57.702	WBGene00007000	tufm-1	86	55.452	Caenorhabditis_elegans
ENSCVAG00000006251	tufm	98	75.895	ENSCJAG00000006236	TUFM	99	72.949	Callithrix_jacchus
ENSCVAG00000006251	tufm	98	78.520	ENSCAFG00000017216	TUFM	99	75.166	Canis_familiaris
ENSCVAG00000006251	tufm	98	78.520	ENSCAFG00020017574	TUFM	99	75.166	Canis_lupus_dingo
ENSCVAG00000006251	tufm	98	78.520	ENSCHIG00000020583	TUFM	99	75.166	Capra_hircus
ENSCVAG00000006251	tufm	99	78.810	ENSTSYG00000026053	TUFM	99	75.664	Carlito_syrichta
ENSCVAG00000006251	tufm	98	78.897	ENSCPOG00000010534	TUFM	99	75.166	Cavia_porcellus
ENSCVAG00000006251	tufm	98	75.895	ENSCCAG00000033296	TUFM	99	72.949	Cebus_capucinus
ENSCVAG00000006251	tufm	98	77.458	ENSCATG00000035822	TUFM	99	74.279	Cercocebus_atys
ENSCVAG00000006251	tufm	98	79.137	ENSCLAG00000013969	TUFM	99	75.388	Chinchilla_lanigera
ENSCVAG00000006251	tufm	98	76.978	ENSCSAG00000006314	TUFM	99	73.392	Chlorocebus_sabaeus
ENSCVAG00000006251	tufm	99	79.048	ENSCHOG00000009077	TUFM	99	75.664	Choloepus_hoffmanni
ENSCVAG00000006251	tufm	98	81.446	ENSCPBG00000003874	TUFM	96	77.803	Chrysemys_picta_bellii
ENSCVAG00000006251	tufm	95	59.158	ENSCING00000002841	-	94	59.406	Ciona_intestinalis
ENSCVAG00000006251	tufm	97	58.637	ENSCSAVG00000009380	-	89	58.881	Ciona_savignyi
ENSCVAG00000006251	tufm	98	77.033	ENSCANG00000035829	TUFM	99	74.058	Colobus_angolensis_palliatus
ENSCVAG00000006251	tufm	98	77.566	ENSCGRG00001022949	Tufm	99	74.058	Cricetulus_griseus_chok1gshd
ENSCVAG00000006251	tufm	98	77.566	ENSCGRG00000001868	-	99	74.058	Cricetulus_griseus_crigri
ENSCVAG00000006251	tufm	98	53.828	ENSCGRG00000013193	-	92	53.828	Cricetulus_griseus_crigri
ENSCVAG00000006251	tufm	100	87.668	ENSCSEG00000013841	tufm	100	87.668	Cynoglossus_semilaevis
ENSCVAG00000006251	tufm	100	85.202	ENSDARG00000104173	tufm	99	85.202	Danio_rerio
ENSCVAG00000006251	tufm	98	77.273	ENSDNOG00000047636	TUFM	99	73.894	Dasypus_novemcinctus
ENSCVAG00000006251	tufm	94	63.033	ENSDORG00000023544	-	99	63.033	Dipodomys_ordii
ENSCVAG00000006251	tufm	96	70.025	FBgn0024556	mEFTu1	83	70.270	Drosophila_melanogaster
ENSCVAG00000006251	tufm	85	64.738	ENSETEG00000009601	TUFM	91	64.738	Echinops_telfairi
ENSCVAG00000006251	tufm	95	72.346	ENSEBUG00000015907	tufm	66	73.086	Eptatretus_burgeri
ENSCVAG00000006251	tufm	96	79.319	ENSEASG00005015477	TUFM	99	75.556	Equus_asinus_asinus
ENSCVAG00000006251	tufm	96	79.319	ENSECAG00000019763	TUFM	99	75.556	Equus_caballus
ENSCVAG00000006251	tufm	83	78.310	ENSEEUG00000001402	TUFM	89	78.310	Erinaceus_europaeus
ENSCVAG00000006251	tufm	100	89.955	ENSELUG00000013410	tufm	96	89.955	Esox_lucius
ENSCVAG00000006251	tufm	98	78.282	ENSFCAG00000003103	TUFM	65	74.723	Felis_catus
ENSCVAG00000006251	tufm	93	74.121	ENSFDAG00000010881	TUFM	99	76.190	Fukomys_damarensis
ENSCVAG00000006251	tufm	99	88.443	ENSFHEG00000020646	tufm	93	90.191	Fundulus_heteroclitus
ENSCVAG00000006251	tufm	100	89.910	ENSGMOG00000014616	tufm	100	89.910	Gadus_morhua
ENSCVAG00000006251	tufm	100	97.534	ENSGAFG00000004682	tufm	100	97.534	Gambusia_affinis
ENSCVAG00000006251	tufm	100	92.377	ENSGACG00000012961	tufm	100	92.377	Gasterosteus_aculeatus
ENSCVAG00000006251	tufm	98	81.446	ENSGAGG00000006132	TUFM	99	81.886	Gopherus_agassizii
ENSCVAG00000006251	tufm	97	77.913	ENSGGOG00000014136	TUFM	99	74.336	Gorilla_gorilla
ENSCVAG00000006251	tufm	100	96.861	ENSHBUG00000019031	tufm	93	96.861	Haplochromis_burtoni
ENSCVAG00000006251	tufm	98	77.218	ENSHGLG00000006613	TUFM	92	77.218	Heterocephalus_glaber_female
ENSCVAG00000006251	tufm	98	73.381	ENSHGLG00100004096	TUFM	92	73.381	Heterocephalus_glaber_male
ENSCVAG00000006251	tufm	99	93.483	ENSHCOG00000014418	tufm	99	93.483	Hippocampus_comes
ENSCVAG00000006251	tufm	95	47.477	ENSIPUG00000020682	-	91	56.604	Ictalurus_punctatus
ENSCVAG00000006251	tufm	100	87.668	ENSIPUG00000022457	tufm	100	87.668	Ictalurus_punctatus
ENSCVAG00000006251	tufm	98	78.998	ENSSTOG00000011837	TUFM	99	75.388	Ictidomys_tridecemlineatus
ENSCVAG00000006251	tufm	98	77.804	ENSJJAG00000011840	Tufm	99	73.942	Jaculus_jaculus
ENSCVAG00000006251	tufm	100	91.480	ENSKMAG00000009794	tufm	100	91.480	Kryptolebias_marmoratus
ENSCVAG00000006251	tufm	100	93.049	ENSLBEG00000023735	tufm	100	93.049	Labrus_bergylta
ENSCVAG00000006251	tufm	97	84.783	ENSLACG00000008242	TUFM	97	81.179	Latimeria_chalumnae
ENSCVAG00000006251	tufm	99	75.238	ENSLAFG00000028911	TUFM	99	72.422	Loxodonta_africana
ENSCVAG00000006251	tufm	98	77.512	ENSMFAG00000033739	TUFM	99	74.336	Macaca_fascicularis
ENSCVAG00000006251	tufm	98	77.512	ENSMMUG00000003303	TUFM	99	74.336	Macaca_mulatta
ENSCVAG00000006251	tufm	98	77.512	ENSMNEG00000006031	TUFM	99	74.336	Macaca_nemestrina
ENSCVAG00000006251	tufm	98	77.458	ENSMLEG00000042133	TUFM	99	74.279	Mandrillus_leucophaeus
ENSCVAG00000006251	tufm	100	93.946	ENSMAMG00000002053	tufm	100	93.946	Mastacembelus_armatus
ENSCVAG00000006251	tufm	100	96.637	ENSMZEG00005010857	tufm	93	96.637	Maylandia_zebra
ENSCVAG00000006251	tufm	98	78.043	ENSMAUG00000010490	Tufm	99	74.501	Mesocricetus_auratus
ENSCVAG00000006251	tufm	98	77.566	ENSMICG00000007650	TUFM	99	74.058	Microcebus_murinus
ENSCVAG00000006251	tufm	98	78.043	ENSMOCG00000010051	Tufm	99	74.723	Microtus_ochrogaster
ENSCVAG00000006251	tufm	99	92.840	ENSMMOG00000012344	tufm	96	91.455	Mola_mola
ENSCVAG00000006251	tufm	98	79.137	ENSMODG00000015564	TUFM	92	79.137	Monodelphis_domestica
ENSCVAG00000006251	tufm	100	90.807	ENSMALG00000020254	tufm	100	90.807	Monopterus_albus
ENSCVAG00000006251	tufm	98	78.043	MGP_CAROLIEiJ_G0030449	-	99	74.501	Mus_caroli
ENSCVAG00000006251	tufm	98	78.043	MGP_CAROLIEiJ_G0030448	-	98	80.702	Mus_caroli
ENSCVAG00000006251	tufm	98	78.043	ENSMUSG00000073838	Tufm	98	80.702	Mus_musculus
ENSCVAG00000006251	tufm	98	78.282	MGP_PahariEiJ_G0013658	-	98	80.702	Mus_pahari
ENSCVAG00000006251	tufm	98	78.282	MGP_PahariEiJ_G0013659	-	99	74.723	Mus_pahari
ENSCVAG00000006251	tufm	98	78.282	MGP_SPRETEiJ_G0031562	-	98	81.579	Mus_spretus
ENSCVAG00000006251	tufm	98	71.930	MGP_SPRETEiJ_G0031563	-	99	69.057	Mus_spretus
ENSCVAG00000006251	tufm	85	79.121	ENSMPUG00000012816	TUFM	98	78.804	Mustela_putorius_furo
ENSCVAG00000006251	tufm	99	77.381	ENSMLUG00000012335	-	99	73.836	Myotis_lucifugus
ENSCVAG00000006251	tufm	98	78.282	ENSNGAG00000008610	Tufm	99	74.723	Nannospalax_galili
ENSCVAG00000006251	tufm	100	83.184	ENSNBRG00000006466	tufm	96	97.238	Neolamprologus_brichardi
ENSCVAG00000006251	tufm	99	72.447	ENSNLEG00000011063	TUFM	99	69.757	Nomascus_leucogenys
ENSCVAG00000006251	tufm	82	79.827	ENSMEUG00000011131	TUFM	100	79.827	Notamacropus_eugenii
ENSCVAG00000006251	tufm	99	67.857	ENSOPRG00000002318	-	98	64.732	Ochotona_princeps
ENSCVAG00000006251	tufm	100	96.861	ENSONIG00000019389	tufm	100	96.861	Oreochromis_niloticus
ENSCVAG00000006251	tufm	99	80.285	ENSOANG00000013114	TUFM	95	81.446	Ornithorhynchus_anatinus
ENSCVAG00000006251	tufm	98	78.759	ENSOCUG00000002683	TUFM	92	78.759	Oryctolagus_cuniculus
ENSCVAG00000006251	tufm	100	96.637	ENSORLG00000011497	tufm	100	96.637	Oryzias_latipes
ENSCVAG00000006251	tufm	100	96.861	ENSORLG00020013437	tufm	100	96.861	Oryzias_latipes_hni
ENSCVAG00000006251	tufm	100	96.637	ENSORLG00015003107	tufm	100	96.637	Oryzias_latipes_hsok
ENSCVAG00000006251	tufm	100	96.637	ENSOMEG00000016958	tufm	100	96.637	Oryzias_melastigma
ENSCVAG00000006251	tufm	98	77.566	ENSOGAG00000006875	TUFM	99	74.279	Otolemur_garnettii
ENSCVAG00000006251	tufm	94	79.602	ENSOARG00000002357	TUFM	97	79.602	Ovis_aries
ENSCVAG00000006251	tufm	97	77.913	ENSPPAG00000035168	TUFM	99	74.115	Pan_paniscus
ENSCVAG00000006251	tufm	98	78.282	ENSPPRG00000014248	TUFM	99	74.723	Panthera_pardus
ENSCVAG00000006251	tufm	99	77.857	ENSPTIG00000009980	TUFM	99	77.857	Panthera_tigris_altaica
ENSCVAG00000006251	tufm	97	77.913	ENSPTRG00000007939	TUFM	99	74.336	Pan_troglodytes
ENSCVAG00000006251	tufm	98	77.273	ENSPANG00000019624	TUFM	99	74.115	Papio_anubis
ENSCVAG00000006251	tufm	100	85.938	ENSPKIG00000023809	tufm	98	85.938	Paramormyrops_kingsleyae
ENSCVAG00000006251	tufm	74	79.048	ENSPSIG00000005302	TUFM	100	79.048	Pelodiscus_sinensis
ENSCVAG00000006251	tufm	98	93.269	ENSPMGG00000015631	tufm	99	93.269	Periophthalmus_magnuspinnatus
ENSCVAG00000006251	tufm	98	77.566	ENSPEMG00000012208	Tufm	99	74.279	Peromyscus_maniculatus_bairdii
ENSCVAG00000006251	tufm	98	78.177	ENSPCIG00000025208	TUFM	99	74.505	Phascolarctos_cinereus
ENSCVAG00000006251	tufm	100	93.722	ENSPFOG00000007043	tufm	100	93.722	Poecilia_formosa
ENSCVAG00000006251	tufm	99	92.180	ENSPLAG00000014372	tufm	97	90.826	Poecilia_latipinna
ENSCVAG00000006251	tufm	100	93.946	ENSPMEG00000019508	tufm	100	93.946	Poecilia_mexicana
ENSCVAG00000006251	tufm	100	91.518	ENSPMEG00000014520	-	100	91.518	Poecilia_mexicana
ENSCVAG00000006251	tufm	100	93.946	ENSPREG00000013913	tufm	100	93.946	Poecilia_reticulata
ENSCVAG00000006251	tufm	98	76.611	ENSPPYG00000007226	TUFM	99	73.614	Pongo_abelii
ENSCVAG00000006251	tufm	98	72.727	ENSPCAG00000015294	TUFM	93	72.275	Procavia_capensis
ENSCVAG00000006251	tufm	98	77.327	ENSPCOG00000012267	TUFM	99	73.836	Propithecus_coquereli
ENSCVAG00000006251	tufm	99	96.396	ENSPNYG00000008905	tufm	100	96.396	Pundamilia_nyererei
ENSCVAG00000006251	tufm	100	91.480	ENSPNAG00000018881	tufm	100	91.480	Pygocentrus_nattereri
ENSCVAG00000006251	tufm	98	78.282	ENSRNOG00000018604	Tufm	99	74.723	Rattus_norvegicus
ENSCVAG00000006251	tufm	60	77.043	ENSRBIG00000036713	-	94	77.043	Rhinopithecus_bieti
ENSCVAG00000006251	tufm	94	76.119	ENSRBIG00000042008	-	97	73.103	Rhinopithecus_bieti
ENSCVAG00000006251	tufm	98	77.512	ENSRROG00000036858	-	99	74.501	Rhinopithecus_roxellana
ENSCVAG00000006251	tufm	63	75.093	ENSRROG00000044977	-	82	70.530	Rhinopithecus_roxellana
ENSCVAG00000006251	tufm	94	60.784	YOR187W	TUF1	93	60.784	Saccharomyces_cerevisiae
ENSCVAG00000006251	tufm	98	75.895	ENSSBOG00000026542	TUFM	98	73.636	Saimiri_boliviensis_boliviensis
ENSCVAG00000006251	tufm	98	79.426	ENSSHAG00000012121	TUFM	97	79.426	Sarcophilus_harrisii
ENSCVAG00000006251	tufm	100	86.161	ENSSFOG00015013352	tufm	100	86.161	Scleropages_formosus
ENSCVAG00000006251	tufm	100	94.170	ENSSMAG00000010053	tufm	100	94.170	Scophthalmus_maximus
ENSCVAG00000006251	tufm	100	95.740	ENSSDUG00000016896	tufm	100	95.740	Seriola_dumerili
ENSCVAG00000006251	tufm	100	95.516	ENSSLDG00000006494	tufm	100	95.516	Seriola_lalandi_dorsalis
ENSCVAG00000006251	tufm	86	77.808	ENSSARG00000011228	TUFM	96	77.808	Sorex_araneus
ENSCVAG00000006251	tufm	98	71.770	ENSSPUG00000016312	TUFM	99	70.930	Sphenodon_punctatus
ENSCVAG00000006251	tufm	100	93.722	ENSSPAG00000009936	tufm	99	93.722	Stegastes_partitus
ENSCVAG00000006251	tufm	98	78.282	ENSSSCG00000007803	TUFM	99	75.166	Sus_scrofa
ENSCVAG00000006251	tufm	100	91.704	ENSTRUG00000008300	tufm	100	91.704	Takifugu_rubripes
ENSCVAG00000006251	tufm	99	74.940	ENSTBEG00000015029	TUFM	92	75.656	Tupaia_belangeri
ENSCVAG00000006251	tufm	60	78.599	ENSTTRG00000005930	-	57	78.599	Tursiops_truncatus
ENSCVAG00000006251	tufm	65	78.182	ENSTTRG00000001980	-	100	78.182	Tursiops_truncatus
ENSCVAG00000006251	tufm	99	78.095	ENSUAMG00000001471	TUFM	100	75.000	Ursus_americanus
ENSCVAG00000006251	tufm	95	79.803	ENSUMAG00000009341	TUFM	99	79.803	Ursus_maritimus
ENSCVAG00000006251	tufm	65	77.455	ENSVPAG00000009541	TUFM	100	77.455	Vicugna_pacos
ENSCVAG00000006251	tufm	98	78.282	ENSVVUG00000024170	TUFM	99	74.945	Vulpes_vulpes
ENSCVAG00000006251	tufm	88	52.604	ENSXETG00000028019	-	78	89.362	Xenopus_tropicalis
ENSCVAG00000006251	tufm	98	96.890	ENSXMAG00000011848	tufm	99	94.943	Xiphophorus_maculatus