EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000006318 (Gene tree)
Gene ID: 107087601
Gene Symbol: trpt1
Alias: zgc:113138
Full Name: tRNA phosphotransferase 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 3546 bases
Position: chrKL652510.1:2439621-2443166
Accession: 107087601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004990	PTS_2-RNA	PF01885.16	1.9e-63	1	1
ENSCVAP00000023168	PTS_2-RNA	PF01885.16	2.1e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007431	-	2153	XM_015379268	ENSCVAP00000023168	219 (aa)	XP_015234754	-
ENSCVAT00000007426	-	2241	-	ENSCVAP00000004990	215 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000006318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006318	trpt1	98	57.870	ENSG00000149743	TRPT1	93	56.180	Homo_sapiens
ENSCVAG00000006318	trpt1	95	85.507	ENSAPOG00000012925	trpt1	95	83.945	Acanthochromis_polyacanthus
ENSCVAG00000006318	trpt1	95	60.096	ENSAMEG00000018040	TRPT1	85	58.986	Ailuropoda_melanoleuca
ENSCVAG00000006318	trpt1	93	82.090	ENSACIG00000022413	trpt1	94	80.374	Amphilophus_citrinellus
ENSCVAG00000006318	trpt1	95	85.507	ENSAOCG00000001163	trpt1	83	84.404	Amphiprion_ocellaris
ENSCVAG00000006318	trpt1	95	85.990	ENSAPEG00000009873	trpt1	95	84.404	Amphiprion_percula
ENSCVAG00000006318	trpt1	95	82.692	ENSATEG00000014371	trpt1	99	79.646	Anabas_testudineus
ENSCVAG00000006318	trpt1	94	60.488	ENSACAG00000000696	TRPT1	95	60.000	Anolis_carolinensis
ENSCVAG00000006318	trpt1	98	58.986	ENSANAG00000019580	TRPT1	85	58.986	Aotus_nancymaae
ENSCVAG00000006318	trpt1	95	82.126	ENSACLG00000016893	trpt1	95	81.193	Astatotilapia_calliptera
ENSCVAG00000006318	trpt1	95	70.531	ENSAMXG00000010533	trpt1	96	70.046	Astyanax_mexicanus
ENSCVAG00000006318	trpt1	98	57.674	ENSBTAG00000016555	TRPT1	88	57.143	Bos_taurus
ENSCVAG00000006318	trpt1	96	59.048	ENSCJAG00000018169	TRPT1	82	60.000	Callithrix_jacchus
ENSCVAG00000006318	trpt1	95	59.135	ENSCAFG00000014591	TRPT1	82	59.420	Canis_familiaris
ENSCVAG00000006318	trpt1	95	59.135	ENSCAFG00020014101	TRPT1	84	59.135	Canis_lupus_dingo
ENSCVAG00000006318	trpt1	98	57.674	ENSCHIG00000021308	TRPT1	86	57.674	Capra_hircus
ENSCVAG00000006318	trpt1	81	55.618	ENSTSYG00000026766	TRPT1	88	55.618	Carlito_syrichta
ENSCVAG00000006318	trpt1	98	57.477	ENSCAPG00000016934	TRPT1	89	57.477	Cavia_aperea
ENSCVAG00000006318	trpt1	96	58.454	ENSCPOG00000002923	TRPT1	82	59.420	Cavia_porcellus
ENSCVAG00000006318	trpt1	81	58.427	ENSCCAG00000025683	TRPT1	98	49.412	Cebus_capucinus
ENSCVAG00000006318	trpt1	98	57.798	ENSCATG00000031563	TRPT1	85	57.798	Cercocebus_atys
ENSCVAG00000006318	trpt1	98	57.407	ENSCLAG00000016380	TRPT1	85	57.407	Chinchilla_lanigera
ENSCVAG00000006318	trpt1	98	57.604	ENSCSAG00000006952	TRPT1	85	57.604	Chlorocebus_sabaeus
ENSCVAG00000006318	trpt1	66	44.444	ENSCING00000002405	-	76	44.444	Ciona_intestinalis
ENSCVAG00000006318	trpt1	90	39.594	ENSCING00000024241	-	87	37.500	Ciona_intestinalis
ENSCVAG00000006318	trpt1	96	40.845	ENSCSAVG00000003949	-	95	40.845	Ciona_savignyi
ENSCVAG00000006318	trpt1	94	42.718	ENSCSAVG00000011071	-	64	42.718	Ciona_savignyi
ENSCVAG00000006318	trpt1	98	57.339	ENSCANG00000042980	TRPT1	85	57.339	Colobus_angolensis_palliatus
ENSCVAG00000006318	trpt1	99	58.447	ENSCGRG00001008474	Trpt1	87	58.447	Cricetulus_griseus_chok1gshd
ENSCVAG00000006318	trpt1	99	58.447	ENSCGRG00000009793	Trpt1	87	58.447	Cricetulus_griseus_crigri
ENSCVAG00000006318	trpt1	93	77.114	ENSCSEG00000005840	trpt1	92	75.701	Cynoglossus_semilaevis
ENSCVAG00000006318	trpt1	93	69.500	ENSDARG00000037628	trpt1	94	68.868	Danio_rerio
ENSCVAG00000006318	trpt1	93	48.309	ENSDNOG00000044923	TRPT1	73	48.792	Dasypus_novemcinctus
ENSCVAG00000006318	trpt1	98	58.140	ENSDORG00000001624	Trpt1	87	58.140	Dipodomys_ordii
ENSCVAG00000006318	trpt1	89	41.919	FBgn0053057	CG33057	92	41.791	Drosophila_melanogaster
ENSCVAG00000006318	trpt1	96	55.502	ENSEBUG00000012569	-	90	55.882	Eptatretus_burgeri
ENSCVAG00000006318	trpt1	99	58.525	ENSEASG00005019983	TRPT1	85	58.525	Equus_asinus_asinus
ENSCVAG00000006318	trpt1	99	57.604	ENSECAG00000009917	TRPT1	89	57.143	Equus_caballus
ENSCVAG00000006318	trpt1	99	59.447	ENSEEUG00000012739	TRPT1	85	59.447	Erinaceus_europaeus
ENSCVAG00000006318	trpt1	95	72.464	ENSELUG00000007385	trpt1	96	71.689	Esox_lucius
ENSCVAG00000006318	trpt1	98	58.525	ENSFCAG00000024621	TRPT1	87	57.778	Felis_catus
ENSCVAG00000006318	trpt1	98	58.525	ENSFDAG00000002738	TRPT1	85	58.525	Fukomys_damarensis
ENSCVAG00000006318	trpt1	96	85.922	ENSFHEG00000002434	trpt1	97	83.482	Fundulus_heteroclitus
ENSCVAG00000006318	trpt1	94	74.757	ENSGMOG00000008716	trpt1	100	74.757	Gadus_morhua
ENSCVAG00000006318	trpt1	93	54.229	ENSGALG00000050256	TRPT1	67	54.455	Gallus_gallus
ENSCVAG00000006318	trpt1	95	84.135	ENSGAFG00000016762	trpt1	100	81.696	Gambusia_affinis
ENSCVAG00000006318	trpt1	93	76.119	ENSGACG00000016927	trpt1	97	75.141	Gasterosteus_aculeatus
ENSCVAG00000006318	trpt1	98	57.870	ENSGGOG00000012163	TRPT1	85	57.870	Gorilla_gorilla
ENSCVAG00000006318	trpt1	95	82.609	ENSHBUG00000012772	trpt1	95	81.651	Haplochromis_burtoni
ENSCVAG00000006318	trpt1	98	58.065	ENSHGLG00000013748	TRPT1	85	58.065	Heterocephalus_glaber_female
ENSCVAG00000006318	trpt1	98	58.065	ENSHGLG00100013048	TRPT1	85	58.065	Heterocephalus_glaber_male
ENSCVAG00000006318	trpt1	95	76.471	ENSHCOG00000000218	trpt1	96	75.225	Hippocampus_comes
ENSCVAG00000006318	trpt1	95	65.196	ENSIPUG00000002573	trpt1	95	63.134	Ictalurus_punctatus
ENSCVAG00000006318	trpt1	98	58.333	ENSSTOG00000014285	TRPT1	85	58.333	Ictidomys_tridecemlineatus
ENSCVAG00000006318	trpt1	98	58.333	ENSJJAG00000010855	Trpt1	85	58.962	Jaculus_jaculus
ENSCVAG00000006318	trpt1	95	81.731	ENSKMAG00000004214	trpt1	98	78.222	Kryptolebias_marmoratus
ENSCVAG00000006318	trpt1	95	80.392	ENSLBEG00000005640	trpt1	95	78.341	Labrus_bergylta
ENSCVAG00000006318	trpt1	93	63.819	ENSLACG00000016922	TRPT1	89	60.829	Latimeria_chalumnae
ENSCVAG00000006318	trpt1	95	64.904	ENSLOCG00000001345	trpt1	93	62.445	Lepisosteus_oculatus
ENSCVAG00000006318	trpt1	98	57.604	ENSLAFG00000009075	TRPT1	85	57.604	Loxodonta_africana
ENSCVAG00000006318	trpt1	98	57.798	ENSMFAG00000036828	TRPT1	85	57.798	Macaca_fascicularis
ENSCVAG00000006318	trpt1	98	58.333	ENSMMUG00000012940	TRPT1	85	58.333	Macaca_mulatta
ENSCVAG00000006318	trpt1	98	57.798	ENSMNEG00000033348	TRPT1	85	57.798	Macaca_nemestrina
ENSCVAG00000006318	trpt1	98	57.339	ENSMLEG00000031438	TRPT1	92	51.442	Mandrillus_leucophaeus
ENSCVAG00000006318	trpt1	95	83.092	ENSMAMG00000021617	trpt1	96	80.909	Mastacembelus_armatus
ENSCVAG00000006318	trpt1	95	82.609	ENSMZEG00005004773	trpt1	95	81.651	Maylandia_zebra
ENSCVAG00000006318	trpt1	78	58.721	ENSMAUG00000014107	Trpt1	82	58.721	Mesocricetus_auratus
ENSCVAG00000006318	trpt1	98	58.065	ENSMICG00000016950	TRPT1	92	51.429	Microcebus_murinus
ENSCVAG00000006318	trpt1	99	60.731	ENSMOCG00000021342	Trpt1	87	60.731	Microtus_ochrogaster
ENSCVAG00000006318	trpt1	95	80.882	ENSMMOG00000002896	trpt1	92	79.907	Mola_mola
ENSCVAG00000006318	trpt1	96	59.903	ENSMODG00000010226	TRPT1	94	60.386	Monodelphis_domestica
ENSCVAG00000006318	trpt1	95	82.609	ENSMALG00000012208	trpt1	88	80.734	Monopterus_albus
ENSCVAG00000006318	trpt1	99	57.798	MGP_CAROLIEiJ_G0022627	Trpt1	87	57.798	Mus_caroli
ENSCVAG00000006318	trpt1	99	57.798	ENSMUSG00000047656	Trpt1	87	57.798	Mus_musculus
ENSCVAG00000006318	trpt1	99	57.080	MGP_PahariEiJ_G0014121	Trpt1	90	57.080	Mus_pahari
ENSCVAG00000006318	trpt1	99	58.257	MGP_SPRETEiJ_G0023537	Trpt1	87	58.257	Mus_spretus
ENSCVAG00000006318	trpt1	98	59.908	ENSMPUG00000013272	TRPT1	78	59.908	Mustela_putorius_furo
ENSCVAG00000006318	trpt1	95	59.135	ENSMLUG00000024858	TRPT1	85	58.525	Myotis_lucifugus
ENSCVAG00000006318	trpt1	83	56.044	ENSNGAG00000007665	Trpt1	88	56.044	Nannospalax_galili
ENSCVAG00000006318	trpt1	95	76.577	ENSNBRG00000001528	trpt1	95	75.966	Neolamprologus_brichardi
ENSCVAG00000006318	trpt1	93	46.829	ENSNLEG00000033525	-	88	45.055	Nomascus_leucogenys
ENSCVAG00000006318	trpt1	95	58.454	ENSMEUG00000000943	TRPT1	85	57.870	Notamacropus_eugenii
ENSCVAG00000006318	trpt1	98	58.525	ENSOPRG00000015917	TRPT1	86	58.525	Ochotona_princeps
ENSCVAG00000006318	trpt1	96	61.538	ENSODEG00000015724	TRPT1	83	62.500	Octodon_degus
ENSCVAG00000006318	trpt1	95	81.159	ENSONIG00000005333	trpt1	95	80.275	Oreochromis_niloticus
ENSCVAG00000006318	trpt1	93	50.495	ENSOANG00000010375	TRPT1	93	50.472	Ornithorhynchus_anatinus
ENSCVAG00000006318	trpt1	98	57.604	ENSOCUG00000022244	TRPT1	86	57.604	Oryctolagus_cuniculus
ENSCVAG00000006318	trpt1	99	79.638	ENSORLG00000025159	trpt1	99	79.638	Oryzias_latipes
ENSCVAG00000006318	trpt1	99	80.269	ENSORLG00020018944	trpt1	99	80.269	Oryzias_latipes_hni
ENSCVAG00000006318	trpt1	87	81.152	ENSORLG00015017108	trpt1	85	81.152	Oryzias_latipes_hsok
ENSCVAG00000006318	trpt1	100	80.804	ENSOMEG00000018645	trpt1	100	80.804	Oryzias_melastigma
ENSCVAG00000006318	trpt1	95	59.048	ENSOGAG00000007134	TRPT1	83	59.048	Otolemur_garnettii
ENSCVAG00000006318	trpt1	98	57.674	ENSOARG00000004961	TRPT1	84	57.674	Ovis_aries
ENSCVAG00000006318	trpt1	83	56.354	ENSPPAG00000027600	TRPT1	88	56.354	Pan_paniscus
ENSCVAG00000006318	trpt1	82	58.333	ENSPPRG00000022870	TRPT1	87	58.333	Panthera_pardus
ENSCVAG00000006318	trpt1	81	58.427	ENSPTIG00000018872	TRPT1	86	58.427	Panthera_tigris_altaica
ENSCVAG00000006318	trpt1	83	56.354	ENSPTRG00000003822	TRPT1	88	56.354	Pan_troglodytes
ENSCVAG00000006318	trpt1	98	57.798	ENSPANG00000011001	TRPT1	85	57.798	Papio_anubis
ENSCVAG00000006318	trpt1	94	67.980	ENSPKIG00000008323	trpt1	95	66.364	Paramormyrops_kingsleyae
ENSCVAG00000006318	trpt1	98	57.477	ENSPSIG00000009910	TRPT1	90	57.477	Pelodiscus_sinensis
ENSCVAG00000006318	trpt1	97	75.120	ENSPMGG00000005037	trpt1	93	75.120	Periophthalmus_magnuspinnatus
ENSCVAG00000006318	trpt1	99	58.904	ENSPEMG00000013720	Trpt1	87	58.904	Peromyscus_maniculatus_bairdii
ENSCVAG00000006318	trpt1	93	53.431	ENSPMAG00000001449	trpt1	98	53.431	Petromyzon_marinus
ENSCVAG00000006318	trpt1	95	58.937	ENSPCIG00000008060	TRPT1	87	58.140	Phascolarctos_cinereus
ENSCVAG00000006318	trpt1	95	84.615	ENSPFOG00000009475	trpt1	100	81.858	Poecilia_formosa
ENSCVAG00000006318	trpt1	95	83.654	ENSPMEG00000003682	trpt1	100	80.973	Poecilia_mexicana
ENSCVAG00000006318	trpt1	95	85.577	ENSPREG00000015408	trpt1	100	82.301	Poecilia_reticulata
ENSCVAG00000006318	trpt1	95	58.937	ENSPPYG00000003116	TRPT1	85	58.796	Pongo_abelii
ENSCVAG00000006318	trpt1	99	58.333	ENSPCAG00000000762	TRPT1	85	58.333	Procavia_capensis
ENSCVAG00000006318	trpt1	98	58.065	ENSPCOG00000010370	TRPT1	92	51.429	Propithecus_coquereli
ENSCVAG00000006318	trpt1	95	76.577	ENSPNYG00000014805	trpt1	95	75.966	Pundamilia_nyererei
ENSCVAG00000006318	trpt1	95	68.599	ENSPNAG00000008548	trpt1	96	68.203	Pygocentrus_nattereri
ENSCVAG00000006318	trpt1	99	57.078	ENSRNOG00000023023	Trpt1	88	57.078	Rattus_norvegicus
ENSCVAG00000006318	trpt1	98	56.944	ENSRBIG00000040432	TRPT1	85	56.944	Rhinopithecus_bieti
ENSCVAG00000006318	trpt1	98	57.870	ENSRROG00000044905	TRPT1	85	57.870	Rhinopithecus_roxellana
ENSCVAG00000006318	trpt1	84	39.037	YOL102C	TPT1	82	38.743	Saccharomyces_cerevisiae
ENSCVAG00000006318	trpt1	98	58.065	ENSSBOG00000021466	TRPT1	85	58.065	Saimiri_boliviensis_boliviensis
ENSCVAG00000006318	trpt1	95	69.608	ENSSFOG00015005844	trpt1	98	67.873	Scleropages_formosus
ENSCVAG00000006318	trpt1	95	83.092	ENSSMAG00000017744	trpt1	96	81.567	Scophthalmus_maximus
ENSCVAG00000006318	trpt1	95	80.676	ENSSDUG00000017106	trpt1	96	79.263	Seriola_dumerili
ENSCVAG00000006318	trpt1	95	79.412	ENSSLDG00000015957	trpt1	88	77.451	Seriola_lalandi_dorsalis
ENSCVAG00000006318	trpt1	90	79.381	ENSSPAG00000007557	trpt1	77	79.381	Stegastes_partitus
ENSCVAG00000006318	trpt1	99	60.000	ENSSSCG00000013040	TRPT1	84	60.000	Sus_scrofa
ENSCVAG00000006318	trpt1	94	79.126	ENSTRUG00000023723	trpt1	94	77.880	Takifugu_rubripes
ENSCVAG00000006318	trpt1	95	76.329	ENSTNIG00000003381	trpt1	94	75.463	Tetraodon_nigroviridis
ENSCVAG00000006318	trpt1	98	54.976	ENSTBEG00000006023	TRPT1	83	54.976	Tupaia_belangeri
ENSCVAG00000006318	trpt1	98	56.682	ENSTTRG00000010252	TRPT1	85	56.682	Tursiops_truncatus
ENSCVAG00000006318	trpt1	98	60.369	ENSUAMG00000015208	TRPT1	85	60.369	Ursus_americanus
ENSCVAG00000006318	trpt1	98	60.369	ENSUMAG00000001410	TRPT1	85	60.369	Ursus_maritimus
ENSCVAG00000006318	trpt1	98	58.065	ENSVVUG00000029774	TRPT1	88	58.065	Vulpes_vulpes
ENSCVAG00000006318	trpt1	99	59.174	ENSXETG00000007196	trpt1	93	59.174	Xenopus_tropicalis
ENSCVAG00000006318	trpt1	95	82.126	ENSXCOG00000001614	trpt1	94	82.775	Xiphophorus_couchianus
ENSCVAG00000006318	trpt1	95	85.024	ENSXMAG00000003142	trpt1	100	82.960	Xiphophorus_maculatus