EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000006337 (Gene tree)
Gene ID: 107087466
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 5246 bases
Position: chrKL652510.1:2427545-2432790
Accession: 107087466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000005001	RNase_H2_suC	PF08615.11	1.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007407	-	2628	XM_015379054	ENSCVAP00000005001	136 (aa)	XP_015234540	UPI00074270CD

Gene Model

Click here to download ENSCVAG00000006337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006337's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006337	rnaseh2c	100	85.294	ENSAPOG00000012901	rnaseh2c	99	85.294	Acanthochromis_polyacanthus
ENSCVAG00000006337	rnaseh2c	100	80.147	ENSACIG00000022433	rnaseh2c	100	80.147	Amphilophus_citrinellus
ENSCVAG00000006337	rnaseh2c	100	84.559	ENSAOCG00000016855	rnaseh2c	100	84.559	Amphiprion_ocellaris
ENSCVAG00000006337	rnaseh2c	100	85.294	ENSAPEG00000009850	rnaseh2c	100	85.294	Amphiprion_percula
ENSCVAG00000006337	rnaseh2c	100	83.088	ENSATEG00000014395	rnaseh2c	100	83.088	Anabas_testudineus
ENSCVAG00000006337	rnaseh2c	100	77.941	ENSACLG00000016950	rnaseh2c	100	77.941	Astatotilapia_calliptera
ENSCVAG00000006337	rnaseh2c	99	68.148	ENSAMXG00000001210	rnaseh2c	100	68.148	Astyanax_mexicanus
ENSCVAG00000006337	rnaseh2c	99	54.478	ENSCPBG00000023408	-	96	54.478	Chrysemys_picta_bellii
ENSCVAG00000006337	rnaseh2c	100	79.412	ENSCSEG00000005808	rnaseh2c	99	79.412	Cynoglossus_semilaevis
ENSCVAG00000006337	rnaseh2c	100	66.176	ENSDARG00000089637	rnaseh2c	99	66.176	Danio_rerio
ENSCVAG00000006337	rnaseh2c	81	49.138	ENSEBUG00000014939	rnaseh2c	74	49.138	Eptatretus_burgeri
ENSCVAG00000006337	rnaseh2c	99	69.630	ENSELUG00000007345	rnaseh2c	99	69.630	Esox_lucius
ENSCVAG00000006337	rnaseh2c	96	92.308	ENSFHEG00000002419	rnaseh2c	95	92.308	Fundulus_heteroclitus
ENSCVAG00000006337	rnaseh2c	65	71.910	ENSGMOG00000008727	rnaseh2c	99	71.910	Gadus_morhua
ENSCVAG00000006337	rnaseh2c	100	92.647	ENSGAFG00000016755	rnaseh2c	83	92.647	Gambusia_affinis
ENSCVAG00000006337	rnaseh2c	99	55.224	ENSGAGG00000008193	-	96	55.224	Gopherus_agassizii
ENSCVAG00000006337	rnaseh2c	100	79.412	ENSHBUG00000012806	rnaseh2c	100	79.412	Haplochromis_burtoni
ENSCVAG00000006337	rnaseh2c	100	73.529	ENSHCOG00000007177	rnaseh2c	100	73.529	Hippocampus_comes
ENSCVAG00000006337	rnaseh2c	100	64.706	ENSIPUG00000018044	rnaseh2c	100	64.706	Ictalurus_punctatus
ENSCVAG00000006337	rnaseh2c	100	80.147	ENSKMAG00000004184	rnaseh2c	100	80.147	Kryptolebias_marmoratus
ENSCVAG00000006337	rnaseh2c	100	79.562	ENSLBEG00000005742	rnaseh2c	100	79.562	Labrus_bergylta
ENSCVAG00000006337	rnaseh2c	95	57.364	ENSLACG00000010120	-	93	56.818	Latimeria_chalumnae
ENSCVAG00000006337	rnaseh2c	100	78.676	ENSMAMG00000021610	rnaseh2c	100	78.676	Mastacembelus_armatus
ENSCVAG00000006337	rnaseh2c	100	78.676	ENSMZEG00005004796	rnaseh2c	100	78.676	Maylandia_zebra
ENSCVAG00000006337	rnaseh2c	100	79.412	ENSMMOG00000002869	rnaseh2c	100	79.412	Mola_mola
ENSCVAG00000006337	rnaseh2c	100	82.482	ENSMALG00000012198	rnaseh2c	100	82.482	Monopterus_albus
ENSCVAG00000006337	rnaseh2c	100	79.412	ENSNBRG00000001462	rnaseh2c	100	79.412	Neolamprologus_brichardi
ENSCVAG00000006337	rnaseh2c	100	78.676	ENSONIG00000005338	rnaseh2c	99	78.676	Oreochromis_niloticus
ENSCVAG00000006337	rnaseh2c	100	75.000	ENSORLG00000023473	rnaseh2c	100	75.000	Oryzias_latipes
ENSCVAG00000006337	rnaseh2c	100	75.000	ENSORLG00020019053	rnaseh2c	91	75.000	Oryzias_latipes_hni
ENSCVAG00000006337	rnaseh2c	100	77.206	ENSORLG00015017067	rnaseh2c	91	77.206	Oryzias_latipes_hsok
ENSCVAG00000006337	rnaseh2c	100	74.265	ENSOMEG00000018607	rnaseh2c	100	74.265	Oryzias_melastigma
ENSCVAG00000006337	rnaseh2c	100	59.559	ENSPKIG00000019331	rnaseh2c	100	59.559	Paramormyrops_kingsleyae
ENSCVAG00000006337	rnaseh2c	100	89.706	ENSPFOG00000009415	rnaseh2c	100	89.706	Poecilia_formosa
ENSCVAG00000006337	rnaseh2c	100	89.706	ENSPLAG00000023330	rnaseh2c	100	89.706	Poecilia_latipinna
ENSCVAG00000006337	rnaseh2c	100	89.706	ENSPMEG00000003696	rnaseh2c	100	89.706	Poecilia_mexicana
ENSCVAG00000006337	rnaseh2c	100	85.034	ENSPREG00000015384	rnaseh2c	73	85.034	Poecilia_reticulata
ENSCVAG00000006337	rnaseh2c	100	79.412	ENSPNYG00000014766	rnaseh2c	100	79.412	Pundamilia_nyererei
ENSCVAG00000006337	rnaseh2c	99	66.667	ENSPNAG00000019111	rnaseh2c	99	66.667	Pygocentrus_nattereri
ENSCVAG00000006337	rnaseh2c	99	67.407	ENSSFOG00015005760	rnaseh2c	99	67.407	Scleropages_formosus
ENSCVAG00000006337	rnaseh2c	100	79.412	ENSSMAG00000017738	rnaseh2c	100	79.412	Scophthalmus_maximus
ENSCVAG00000006337	rnaseh2c	100	81.618	ENSSDUG00000017285	rnaseh2c	100	81.618	Seriola_dumerili
ENSCVAG00000006337	rnaseh2c	100	83.088	ENSSLDG00000016030	rnaseh2c	100	83.088	Seriola_lalandi_dorsalis
ENSCVAG00000006337	rnaseh2c	96	51.799	ENSSPUG00000000842	-	89	51.471	Sphenodon_punctatus
ENSCVAG00000006337	rnaseh2c	100	79.412	ENSSPAG00000007536	rnaseh2c	100	79.412	Stegastes_partitus
ENSCVAG00000006337	rnaseh2c	100	69.853	ENSTRUG00000021845	rnaseh2c	100	69.853	Takifugu_rubripes
ENSCVAG00000006337	rnaseh2c	100	75.000	ENSTNIG00000000431	rnaseh2c	100	75.000	Tetraodon_nigroviridis
ENSCVAG00000006337	rnaseh2c	99	47.761	ENSXETG00000032466	-	98	47.761	Xenopus_tropicalis
ENSCVAG00000006337	rnaseh2c	100	91.176	ENSXCOG00000001611	rnaseh2c	100	91.176	Xiphophorus_couchianus
ENSCVAG00000006337	rnaseh2c	100	94.118	ENSXMAG00000003147	rnaseh2c	83	94.118	Xiphophorus_maculatus