EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000006484 (Gene tree)
Gene ID: 107103750
Gene Symbol: -
Alias: -
Full Name: zinc finger protein with KRAB and SCAN domains 1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 11123 bases
Position: chrKL654021.1:90922-102044
Accession: 107103750
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000005137	zf-C2H2	PF00096.26	8.1e-27	1	5
ENSCVAP00000005137	zf-C2H2	PF00096.26	8.1e-27	2	5
ENSCVAP00000005137	zf-C2H2	PF00096.26	8.1e-27	3	5
ENSCVAP00000005137	zf-C2H2	PF00096.26	8.1e-27	4	5
ENSCVAP00000005137	zf-C2H2	PF00096.26	8.1e-27	5	5
ENSCVAP00000005137	zf-met	PF12874.7	1e-14	1	4
ENSCVAP00000005137	zf-met	PF12874.7	1e-14	2	4
ENSCVAP00000005137	zf-met	PF12874.7	1e-14	3	4
ENSCVAP00000005137	zf-met	PF12874.7	1e-14	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007177	-	5194	XM_015403564	ENSCVAP00000005137	334 (aa)	XP_015259050	UPI000742A9F9

Gene Model

Click here to download ENSCVAG00000006484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000006484	-	73	50.000	ENSCVAG00000021107	-	98	50.000
ENSCVAG00000006484	-	70	45.872	ENSCVAG00000012216	-	100	45.872
ENSCVAG00000006484	-	84	45.775	ENSCVAG00000012213	-	50	45.775
ENSCVAG00000006484	-	70	47.222	ENSCVAG00000012399	-	99	47.222
ENSCVAG00000006484	-	75	50.350	ENSCVAG00000001568	-	97	50.350
ENSCVAG00000006484	-	96	46.154	ENSCVAG00000004508	-	99	46.154
ENSCVAG00000006484	-	96	53.933	ENSCVAG00000007073	-	93	49.296
ENSCVAG00000006484	-	50	48.026	ENSCVAG00000016898	-	96	48.026
ENSCVAG00000006484	-	96	60.000	ENSCVAG00000016915	-	81	60.000
ENSCVAG00000006484	-	78	41.727	ENSCVAG00000003396	-	99	41.727
ENSCVAG00000006484	-	71	48.673	ENSCVAG00000011213	-	96	48.837
ENSCVAG00000006484	-	75	49.254	ENSCVAG00000010160	-	90	48.227
ENSCVAG00000006484	-	84	64.444	ENSCVAG00000006667	-	70	64.444
ENSCVAG00000006484	-	79	46.903	ENSCVAG00000007169	-	75	46.903
ENSCVAG00000006484	-	75	51.163	ENSCVAG00000001369	-	92	43.836
ENSCVAG00000006484	-	70	34.701	ENSCVAG00000003630	-	72	37.109
ENSCVAG00000006484	-	55	49.686	ENSCVAG00000009827	-	99	49.686
ENSCVAG00000006484	-	72	42.254	ENSCVAG00000011334	-	95	42.254
ENSCVAG00000006484	-	66	41.964	ENSCVAG00000011828	gfi1ab	64	41.964
ENSCVAG00000006484	-	71	41.772	ENSCVAG00000001609	-	84	33.904
ENSCVAG00000006484	-	69	45.223	ENSCVAG00000014322	-	97	45.223
ENSCVAG00000006484	-	72	47.183	ENSCVAG00000000227	-	87	47.183
ENSCVAG00000006484	-	58	48.529	ENSCVAG00000009752	-	71	48.529
ENSCVAG00000006484	-	55	46.809	ENSCVAG00000002488	-	74	46.809
ENSCVAG00000006484	-	96	47.097	ENSCVAG00000016883	-	98	47.097
ENSCVAG00000006484	-	73	39.431	ENSCVAG00000019705	-	86	39.431
ENSCVAG00000006484	-	74	49.677	ENSCVAG00000008200	-	97	49.677
ENSCVAG00000006484	-	51	50.000	ENSCVAG00000008206	-	86	50.000
ENSCVAG00000006484	-	66	50.847	ENSCVAG00000006673	-	63	50.847
ENSCVAG00000006484	-	75	47.059	ENSCVAG00000023054	-	73	50.704
ENSCVAG00000006484	-	51	42.105	ENSCVAG00000005112	-	78	42.105
ENSCVAG00000006484	-	71	47.973	ENSCVAG00000012180	-	97	47.973
ENSCVAG00000006484	-	51	46.602	ENSCVAG00000014622	-	93	46.316
ENSCVAG00000006484	-	71	47.651	ENSCVAG00000009981	-	98	47.651
ENSCVAG00000006484	-	58	51.064	ENSCVAG00000009258	znf319b	83	46.023
ENSCVAG00000006484	-	51	50.000	ENSCVAG00000007051	-	98	50.000
ENSCVAG00000006484	-	98	44.643	ENSCVAG00000020968	-	96	44.643
ENSCVAG00000006484	-	96	49.296	ENSCVAG00000012543	-	99	50.000
ENSCVAG00000006484	-	74	47.794	ENSCVAG00000019537	-	95	47.794
ENSCVAG00000006484	-	97	49.660	ENSCVAG00000013337	-	100	49.660
ENSCVAG00000006484	-	68	51.351	ENSCVAG00000012248	-	90	51.351
ENSCVAG00000006484	-	72	50.000	ENSCVAG00000011469	-	99	50.000
ENSCVAG00000006484	-	51	46.452	ENSCVAG00000020126	-	61	46.452
ENSCVAG00000006484	-	71	30.612	ENSCVAG00000000161	-	98	30.612
ENSCVAG00000006484	-	50	51.613	ENSCVAG00000020745	-	96	51.327
ENSCVAG00000006484	-	56	41.727	ENSCVAG00000013692	prdm5	74	43.511
ENSCVAG00000006484	-	75	42.254	ENSCVAG00000000351	-	95	42.254
ENSCVAG00000006484	-	96	42.424	ENSCVAG00000016924	-	75	42.424
ENSCVAG00000006484	-	59	42.683	ENSCVAG00000002284	-	96	42.683
ENSCVAG00000006484	-	68	47.674	ENSCVAG00000021225	-	86	55.172
ENSCVAG00000006484	-	75	51.282	ENSCVAG00000002833	-	81	51.282
ENSCVAG00000006484	-	82	46.853	ENSCVAG00000002506	-	97	46.853
ENSCVAG00000006484	-	54	46.087	ENSCVAG00000002500	-	87	46.087
ENSCVAG00000006484	-	54	43.363	ENSCVAG00000014269	-	97	43.382
ENSCVAG00000006484	-	73	45.000	ENSCVAG00000000419	-	77	45.000
ENSCVAG00000006484	-	90	45.205	ENSCVAG00000006460	-	97	45.205
ENSCVAG00000006484	-	75	49.286	ENSCVAG00000019646	-	86	49.286
ENSCVAG00000006484	-	94	49.640	ENSCVAG00000004958	-	92	43.357
ENSCVAG00000006484	-	57	45.890	ENSCVAG00000003601	ZNF319	86	45.890
ENSCVAG00000006484	-	81	44.366	ENSCVAG00000008836	-	94	44.366
ENSCVAG00000006484	-	71	48.148	ENSCVAG00000003497	-	97	47.445
ENSCVAG00000006484	-	50	51.538	ENSCVAG00000017511	-	95	51.538
ENSCVAG00000006484	-	63	42.222	ENSCVAG00000010887	-	88	42.222
ENSCVAG00000006484	-	63	43.590	ENSCVAG00000003512	-	98	43.590
ENSCVAG00000006484	-	72	49.286	ENSCVAG00000003514	-	96	49.286
ENSCVAG00000006484	-	52	42.529	ENSCVAG00000021152	-	51	42.529
ENSCVAG00000006484	-	50	49.645	ENSCVAG00000008535	-	68	49.645
ENSCVAG00000006484	-	87	45.652	ENSCVAG00000002295	-	97	47.500
ENSCVAG00000006484	-	70	47.887	ENSCVAG00000014404	-	98	47.887
ENSCVAG00000006484	-	71	48.611	ENSCVAG00000022991	-	99	49.057
ENSCVAG00000006484	-	76	52.941	ENSCVAG00000010442	-	99	52.941
ENSCVAG00000006484	-	71	42.105	ENSCVAG00000003434	-	98	42.105
ENSCVAG00000006484	-	69	42.857	ENSCVAG00000018383	-	95	45.513
ENSCVAG00000006484	-	52	48.485	ENSCVAG00000003433	-	98	48.485
ENSCVAG00000006484	-	74	50.000	ENSCVAG00000005494	-	98	50.000
ENSCVAG00000006484	-	71	48.571	ENSCVAG00000000423	-	97	48.571
ENSCVAG00000006484	-	73	49.664	ENSCVAG00000012284	-	92	49.664
ENSCVAG00000006484	-	70	50.000	ENSCVAG00000012228	-	96	50.000
ENSCVAG00000006484	-	74	45.890	ENSCVAG00000009747	-	79	45.890
ENSCVAG00000006484	-	72	47.552	ENSCVAG00000016796	-	86	47.552
ENSCVAG00000006484	-	50	47.863	ENSCVAG00000004368	-	71	47.863
ENSCVAG00000006484	-	50	41.463	ENSCVAG00000000144	-	66	41.463
ENSCVAG00000006484	-	95	48.485	ENSCVAG00000016906	-	72	48.485
ENSCVAG00000006484	-	72	45.794	ENSCVAG00000006653	-	87	45.794
ENSCVAG00000006484	-	88	35.976	ENSCVAG00000006659	-	98	46.341
ENSCVAG00000006484	-	81	48.592	ENSCVAG00000020119	-	88	48.592
ENSCVAG00000006484	-	86	30.861	ENSCVAG00000011712	-	94	30.861
ENSCVAG00000006484	-	75	46.429	ENSCVAG00000006389	-	92	50.000
ENSCVAG00000006484	-	72	44.444	ENSCVAG00000006491	-	96	41.615
ENSCVAG00000006484	-	96	52.294	ENSCVAG00000020414	-	99	52.294
ENSCVAG00000006484	-	75	50.000	ENSCVAG00000015153	-	82	50.000
ENSCVAG00000006484	-	59	46.602	ENSCVAG00000015159	-	63	46.602
ENSCVAG00000006484	-	74	48.148	ENSCVAG00000001767	-	89	48.148

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006484	-	96	44.828	ENSACIG00000004641	-	94	44.828	Amphilophus_citrinellus
ENSCVAG00000006484	-	57	44.000	ENSACIG00000017892	-	75	44.000	Amphilophus_citrinellus
ENSCVAG00000006484	-	59	51.220	ENSACIG00000007464	-	64	51.220	Amphilophus_citrinellus
ENSCVAG00000006484	-	96	51.376	ENSAPEG00000018762	-	82	51.376	Amphiprion_percula
ENSCVAG00000006484	-	60	47.015	ENSATEG00000018931	-	85	47.015	Anabas_testudineus
ENSCVAG00000006484	-	57	49.425	ENSAMXG00000029518	-	61	49.425	Astyanax_mexicanus
ENSCVAG00000006484	-	50	33.784	ENSAMXG00000037631	-	53	39.474	Astyanax_mexicanus
ENSCVAG00000006484	-	76	49.635	ENSCSEG00000008528	-	74	49.635	Cynoglossus_semilaevis
ENSCVAG00000006484	-	96	49.074	ENSELUG00000012088	-	99	49.074	Esox_lucius
ENSCVAG00000006484	-	80	41.304	ENSFHEG00000023184	-	86	41.304	Fundulus_heteroclitus
ENSCVAG00000006484	-	96	46.602	ENSGAFG00000008204	-	96	46.602	Gambusia_affinis
ENSCVAG00000006484	-	76	68.110	ENSGAFG00000001879	-	99	68.110	Gambusia_affinis
ENSCVAG00000006484	-	96	40.678	ENSGAFG00000012545	-	96	36.601	Gambusia_affinis
ENSCVAG00000006484	-	97	36.104	ENSGAFG00000011998	-	97	36.104	Gambusia_affinis
ENSCVAG00000006484	-	72	43.089	ENSHCOG00000013489	-	89	45.775	Hippocampus_comes
ENSCVAG00000006484	-	70	49.565	ENSHCOG00000001873	-	92	49.565	Hippocampus_comes
ENSCVAG00000006484	-	96	33.239	ENSHCOG00000019389	-	94	33.239	Hippocampus_comes
ENSCVAG00000006484	-	70	49.565	ENSHCOG00000008550	-	92	49.565	Hippocampus_comes
ENSCVAG00000006484	-	98	37.500	ENSHCOG00000008213	-	94	36.885	Hippocampus_comes
ENSCVAG00000006484	-	96	37.113	ENSHCOG00000008227	-	94	37.113	Hippocampus_comes
ENSCVAG00000006484	-	54	45.038	ENSHCOG00000015497	-	80	45.038	Hippocampus_comes
ENSCVAG00000006484	-	98	32.530	ENSLBEG00000011210	-	84	32.353	Labrus_bergylta
ENSCVAG00000006484	-	55	46.429	ENSLOCG00000004208	-	99	46.429	Lepisosteus_oculatus
ENSCVAG00000006484	-	76	42.073	ENSMAMG00000017939	-	94	42.073	Mastacembelus_armatus
ENSCVAG00000006484	-	96	46.739	ENSMMOG00000017592	-	91	46.739	Mola_mola
ENSCVAG00000006484	-	81	43.333	ENSNBRG00000006112	-	71	43.333	Neolamprologus_brichardi
ENSCVAG00000006484	-	50	42.453	ENSONIG00000005050	-	95	42.453	Oreochromis_niloticus
ENSCVAG00000006484	-	51	48.062	ENSONIG00000007967	-	57	48.062	Oreochromis_niloticus
ENSCVAG00000006484	-	60	48.936	ENSORLG00000002268	-	93	48.936	Oryzias_latipes
ENSCVAG00000006484	-	96	50.602	ENSORLG00020019227	-	95	44.444	Oryzias_latipes_hni
ENSCVAG00000006484	-	71	43.564	ENSORLG00020018921	-	96	40.141	Oryzias_latipes_hni
ENSCVAG00000006484	-	88	35.374	ENSOMEG00000019114	-	52	35.374	Oryzias_melastigma
ENSCVAG00000006484	-	63	36.792	ENSOMEG00000005578	-	77	36.792	Oryzias_melastigma
ENSCVAG00000006484	-	50	42.361	ENSPMGG00000002455	-	89	41.791	Periophthalmus_magnuspinnatus
ENSCVAG00000006484	-	71	49.194	ENSPMGG00000002661	-	94	49.194	Periophthalmus_magnuspinnatus
ENSCVAG00000006484	-	97	43.275	ENSPFOG00000009491	-	100	43.275	Poecilia_formosa
ENSCVAG00000006484	-	64	45.113	ENSPFOG00000018860	-	99	45.113	Poecilia_formosa
ENSCVAG00000006484	-	75	38.224	ENSPLAG00000010067	-	83	38.224	Poecilia_latipinna
ENSCVAG00000006484	-	97	43.275	ENSPMEG00000024117	-	100	43.275	Poecilia_mexicana
ENSCVAG00000006484	-	96	39.241	ENSPREG00000008907	-	99	39.241	Poecilia_reticulata
ENSCVAG00000006484	-	60	44.275	ENSSMAG00000013291	-	92	46.457	Scophthalmus_maximus
ENSCVAG00000006484	-	94	37.647	ENSSDUG00000000905	-	92	37.647	Seriola_dumerili
ENSCVAG00000006484	-	78	46.939	ENSSDUG00000020774	-	85	46.939	Seriola_dumerili
ENSCVAG00000006484	-	50	48.062	ENSSLDG00000011849	-	51	48.062	Seriola_lalandi_dorsalis
ENSCVAG00000006484	-	61	40.741	ENSXCOG00000020768	-	85	40.741	Xiphophorus_couchianus
ENSCVAG00000006484	-	71	43.443	ENSXCOG00000014360	-	96	43.443	Xiphophorus_couchianus
ENSCVAG00000006484	-	74	39.655	ENSXCOG00000003441	-	86	42.647	Xiphophorus_couchianus
ENSCVAG00000006484	-	80	38.961	ENSXMAG00000022657	-	86	38.961	Xiphophorus_maculatus