EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000006499 (Gene tree)
Gene ID: 107104789
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 16061 bases
Position: chrKL654383.1:31499-47559
Accession: 107104789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000005132	ResIII	PF04851.15	1.7e-08	1	1
ENSCVAP00000005132	DEAD	PF00270.29	5.6e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007186	-	2972	XM_015404877	ENSCVAP00000005132	558 (aa)	XP_015260363	UPI0007428B74

Gene Model

Click here to download ENSCVAG00000006499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000006499	ddx56	53	37.037	ENSCVAG00000017562	ddx51	79	37.037

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006499	ddx56	98	64.674	ENSG00000136271	DDX56	98	68.681	Homo_sapiens
ENSCVAG00000006499	ddx56	100	85.740	ENSAPOG00000017113	ddx56	100	85.740	Acanthochromis_polyacanthus
ENSCVAG00000006499	ddx56	91	67.717	ENSAMEG00000017711	DDX56	98	64.065	Ailuropoda_melanoleuca
ENSCVAG00000006499	ddx56	95	72.180	ENSACIG00000013747	ddx56	99	88.525	Amphilophus_citrinellus
ENSCVAG00000006499	ddx56	89	87.625	ENSAOCG00000018059	ddx56	94	87.000	Amphiprion_ocellaris
ENSCVAG00000006499	ddx56	87	87.910	ENSAOCG00000015447	-	87	87.269	Amphiprion_ocellaris
ENSCVAG00000006499	ddx56	100	84.409	ENSAPEG00000007267	ddx56	100	84.409	Amphiprion_percula
ENSCVAG00000006499	ddx56	99	82.406	ENSATEG00000005279	ddx56	99	82.406	Anabas_testudineus
ENSCVAG00000006499	ddx56	100	82.143	ENSACLG00000020113	ddx56	100	82.143	Astatotilapia_calliptera
ENSCVAG00000006499	ddx56	99	76.302	ENSAMXG00000019357	ddx56	99	76.481	Astyanax_mexicanus
ENSCVAG00000006499	ddx56	98	64.973	ENSBTAG00000010602	DDX56	98	65.209	Bos_taurus
ENSCVAG00000006499	ddx56	97	39.893	WBGene00016073	C24H12.4	86	39.893	Caenorhabditis_elegans
ENSCVAG00000006499	ddx56	99	64.568	ENSCJAG00000012233	DDX56	99	64.440	Callithrix_jacchus
ENSCVAG00000006499	ddx56	76	63.087	ENSCAFG00000029295	DDX56	99	62.637	Canis_familiaris
ENSCVAG00000006499	ddx56	91	67.126	ENSCAFG00020019695	DDX56	92	67.404	Canis_lupus_dingo
ENSCVAG00000006499	ddx56	98	65.336	ENSCHIG00000014261	DDX56	98	64.428	Capra_hircus
ENSCVAG00000006499	ddx56	91	68.307	ENSTSYG00000008048	DDX56	98	64.845	Carlito_syrichta
ENSCVAG00000006499	ddx56	85	63.941	ENSCAPG00000006286	DDX56	98	63.732	Cavia_aperea
ENSCVAG00000006499	ddx56	99	65.461	ENSCPOG00000003359	DDX56	99	65.280	Cavia_porcellus
ENSCVAG00000006499	ddx56	99	63.718	ENSCCAG00000025303	DDX56	99	63.620	Cebus_capucinus
ENSCVAG00000006499	ddx56	98	64.748	ENSCATG00000039389	DDX56	98	64.182	Cercocebus_atys
ENSCVAG00000006499	ddx56	99	64.738	ENSCLAG00000007666	DDX56	99	64.195	Chinchilla_lanigera
ENSCVAG00000006499	ddx56	98	64.674	ENSCSAG00000015636	DDX56	98	64.312	Chlorocebus_sabaeus
ENSCVAG00000006499	ddx56	98	69.161	ENSCPBG00000024556	DDX56	97	68.966	Chrysemys_picta_bellii
ENSCVAG00000006499	ddx56	90	60.236	ENSCING00000005185	-	98	60.236	Ciona_intestinalis
ENSCVAG00000006499	ddx56	89	59.519	ENSCSAVG00000011266	-	99	60.321	Ciona_savignyi
ENSCVAG00000006499	ddx56	98	64.493	ENSCANG00000028187	DDX56	98	64.130	Colobus_angolensis_palliatus
ENSCVAG00000006499	ddx56	98	65.517	ENSCGRG00001019019	Ddx56	98	64.791	Cricetulus_griseus_chok1gshd
ENSCVAG00000006499	ddx56	98	65.517	ENSCGRG00000011870	Ddx56	98	64.791	Cricetulus_griseus_crigri
ENSCVAG00000006499	ddx56	100	80.462	ENSCSEG00000008368	ddx56	100	80.284	Cynoglossus_semilaevis
ENSCVAG00000006499	ddx56	99	79.032	ENSDARG00000020913	ddx56	99	78.853	Danio_rerio
ENSCVAG00000006499	ddx56	85	62.578	ENSDNOG00000036526	DDX56	97	62.316	Dasypus_novemcinctus
ENSCVAG00000006499	ddx56	96	51.020	FBgn0001565	Hlc	95	51.020	Drosophila_melanogaster
ENSCVAG00000006499	ddx56	63	76.389	ENSETEG00000002969	-	64	76.389	Echinops_telfairi
ENSCVAG00000006499	ddx56	85	44.561	ENSETEG00000019559	-	100	44.561	Echinops_telfairi
ENSCVAG00000006499	ddx56	97	65.399	ENSEBUG00000009986	ddx56	99	65.942	Eptatretus_burgeri
ENSCVAG00000006499	ddx56	90	67.850	ENSEASG00005017795	DDX56	97	64.890	Equus_asinus_asinus
ENSCVAG00000006499	ddx56	90	67.653	ENSECAG00000019897	DDX56	97	64.706	Equus_caballus
ENSCVAG00000006499	ddx56	86	63.617	ENSEEUG00000004849	DDX56	91	68.056	Erinaceus_europaeus
ENSCVAG00000006499	ddx56	100	80.108	ENSELUG00000004150	ddx56	100	79.928	Esox_lucius
ENSCVAG00000006499	ddx56	98	64.065	ENSFCAG00000010261	DDX56	98	63.702	Felis_catus
ENSCVAG00000006499	ddx56	99	64.376	ENSFDAG00000007128	DDX56	99	63.718	Fukomys_damarensis
ENSCVAG00000006499	ddx56	100	88.710	ENSFHEG00000018008	ddx56	97	92.490	Fundulus_heteroclitus
ENSCVAG00000006499	ddx56	100	82.616	ENSGAFG00000006906	ddx56	99	82.616	Gambusia_affinis
ENSCVAG00000006499	ddx56	91	72.125	ENSGAGG00000006789	DDX56	89	72.835	Gopherus_agassizii
ENSCVAG00000006499	ddx56	98	64.674	ENSGGOG00000012031	DDX56	98	64.545	Gorilla_gorilla
ENSCVAG00000006499	ddx56	95	78.424	ENSHBUG00000015246	ddx56	96	78.424	Haplochromis_burtoni
ENSCVAG00000006499	ddx56	99	63.834	ENSHGLG00000017271	DDX56	99	63.834	Heterocephalus_glaber_female
ENSCVAG00000006499	ddx56	99	63.834	ENSHGLG00100015731	DDX56	99	63.834	Heterocephalus_glaber_male
ENSCVAG00000006499	ddx56	99	81.261	ENSHCOG00000001685	ddx56	99	81.261	Hippocampus_comes
ENSCVAG00000006499	ddx56	99	74.865	ENSIPUG00000006602	ddx56	96	76.364	Ictalurus_punctatus
ENSCVAG00000006499	ddx56	98	65.154	ENSSTOG00000000464	DDX56	98	64.791	Ictidomys_tridecemlineatus
ENSCVAG00000006499	ddx56	98	64.973	ENSJJAG00000014269	Ddx56	99	64.610	Jaculus_jaculus
ENSCVAG00000006499	ddx56	99	86.786	ENSKMAG00000016611	ddx56	99	86.964	Kryptolebias_marmoratus
ENSCVAG00000006499	ddx56	99	83.184	ENSLBEG00000026281	ddx56	100	83.184	Labrus_bergylta
ENSCVAG00000006499	ddx56	99	71.971	ENSLACG00000015551	DDX56	97	71.712	Latimeria_chalumnae
ENSCVAG00000006499	ddx56	100	77.699	ENSLOCG00000015185	ddx56	100	78.269	Lepisosteus_oculatus
ENSCVAG00000006499	ddx56	99	65.054	ENSLAFG00000018206	DDX56	99	64.516	Loxodonta_africana
ENSCVAG00000006499	ddx56	98	64.748	ENSMFAG00000041001	DDX56	98	64.364	Macaca_fascicularis
ENSCVAG00000006499	ddx56	98	64.748	ENSMMUG00000002645	DDX56	98	64.364	Macaca_mulatta
ENSCVAG00000006499	ddx56	98	64.748	ENSMNEG00000028492	DDX56	98	64.364	Macaca_nemestrina
ENSCVAG00000006499	ddx56	98	64.727	ENSMLEG00000043591	DDX56	98	64.364	Mandrillus_leucophaeus
ENSCVAG00000006499	ddx56	100	82.857	ENSMAMG00000007776	ddx56	100	83.036	Mastacembelus_armatus
ENSCVAG00000006499	ddx56	100	82.143	ENSMZEG00005009813	ddx56	100	82.143	Maylandia_zebra
ENSCVAG00000006499	ddx56	99	65.586	ENSMICG00000005550	DDX56	99	65.045	Microcebus_murinus
ENSCVAG00000006499	ddx56	98	64.065	ENSMOCG00000016782	Ddx56	98	63.158	Microtus_ochrogaster
ENSCVAG00000006499	ddx56	100	78.153	ENSMMOG00000009654	ddx56	100	78.330	Mola_mola
ENSCVAG00000006499	ddx56	97	60.909	ENSMODG00000016137	DDX56	97	60.182	Monodelphis_domestica
ENSCVAG00000006499	ddx56	67	78.421	ENSMALG00000016910	ddx56	99	78.010	Monopterus_albus
ENSCVAG00000006499	ddx56	99	63.653	MGP_CAROLIEiJ_G0016069	Ddx56	98	68.145	Mus_caroli
ENSCVAG00000006499	ddx56	99	64.195	ENSMUSG00000004393	Ddx56	98	68.548	Mus_musculus
ENSCVAG00000006499	ddx56	98	64.428	MGP_PahariEiJ_G0016822	Ddx56	98	68.145	Mus_pahari
ENSCVAG00000006499	ddx56	99	64.195	MGP_SPRETEiJ_G0016911	Ddx56	98	68.548	Mus_spretus
ENSCVAG00000006499	ddx56	98	64.247	ENSMPUG00000018196	DDX56	86	63.702	Mustela_putorius_furo
ENSCVAG00000006499	ddx56	98	63.884	ENSMLUG00000003509	DDX56	98	63.884	Myotis_lucifugus
ENSCVAG00000006499	ddx56	99	66.365	ENSNGAG00000018785	Ddx56	99	65.280	Nannospalax_galili
ENSCVAG00000006499	ddx56	95	79.661	ENSNBRG00000002656	ddx56	96	79.661	Neolamprologus_brichardi
ENSCVAG00000006499	ddx56	98	65.399	ENSNLEG00000003816	DDX56	98	65.273	Nomascus_leucogenys
ENSCVAG00000006499	ddx56	89	62.450	ENSMEUG00000006788	DDX56	99	61.647	Notamacropus_eugenii
ENSCVAG00000006499	ddx56	98	63.388	ENSOPRG00000000292	-	98	62.976	Ochotona_princeps
ENSCVAG00000006499	ddx56	67	68.085	ENSODEG00000014807	DDX56	99	67.287	Octodon_degus
ENSCVAG00000006499	ddx56	100	80.108	ENSONIG00000011509	ddx56	99	79.570	Oreochromis_niloticus
ENSCVAG00000006499	ddx56	96	56.985	ENSOANG00000006320	-	99	56.801	Ornithorhynchus_anatinus
ENSCVAG00000006499	ddx56	72	57.389	ENSOANG00000015987	-	94	57.389	Ornithorhynchus_anatinus
ENSCVAG00000006499	ddx56	98	64.663	ENSOCUG00000022918	DDX56	98	64.481	Oryctolagus_cuniculus
ENSCVAG00000006499	ddx56	100	85.842	ENSORLG00000001434	ddx56	100	85.842	Oryzias_latipes
ENSCVAG00000006499	ddx56	100	85.484	ENSORLG00020015718	ddx56	97	85.484	Oryzias_latipes_hni
ENSCVAG00000006499	ddx56	99	85.817	ENSORLG00015003004	ddx56	96	85.817	Oryzias_latipes_hsok
ENSCVAG00000006499	ddx56	100	85.663	ENSOMEG00000022072	ddx56	99	85.663	Oryzias_melastigma
ENSCVAG00000006499	ddx56	99	63.964	ENSOGAG00000009981	DDX56	99	64.195	Otolemur_garnettii
ENSCVAG00000006499	ddx56	98	65.517	ENSOARG00000015240	DDX56	98	64.610	Ovis_aries
ENSCVAG00000006499	ddx56	99	53.464	ENSPPAG00000031263	-	99	53.108	Pan_paniscus
ENSCVAG00000006499	ddx56	98	62.032	ENSPPAG00000029147	DDX56	98	61.896	Pan_paniscus
ENSCVAG00000006499	ddx56	98	63.702	ENSPPRG00000014594	DDX56	98	63.357	Panthera_pardus
ENSCVAG00000006499	ddx56	85	61.684	ENSPTIG00000019500	DDX56	90	61.088	Panthera_tigris_altaica
ENSCVAG00000006499	ddx56	93	52.830	ENSPTRG00000052765	-	99	54.151	Pan_troglodytes
ENSCVAG00000006499	ddx56	98	64.674	ENSPTRG00000019147	DDX56	98	64.545	Pan_troglodytes
ENSCVAG00000006499	ddx56	98	64.388	ENSPANG00000002446	DDX56	98	64.000	Papio_anubis
ENSCVAG00000006499	ddx56	99	76.492	ENSPKIG00000018998	ddx56	99	76.492	Paramormyrops_kingsleyae
ENSCVAG00000006499	ddx56	95	83.239	ENSPMGG00000017421	ddx56	99	83.239	Periophthalmus_magnuspinnatus
ENSCVAG00000006499	ddx56	98	67.153	ENSPCIG00000009336	DDX56	98	65.586	Phascolarctos_cinereus
ENSCVAG00000006499	ddx56	100	92.115	ENSPFOG00000018658	ddx56	100	92.115	Poecilia_formosa
ENSCVAG00000006499	ddx56	100	92.294	ENSPLAG00000019208	ddx56	100	92.294	Poecilia_latipinna
ENSCVAG00000006499	ddx56	100	92.294	ENSPMEG00000001775	ddx56	100	92.294	Poecilia_mexicana
ENSCVAG00000006499	ddx56	100	92.294	ENSPREG00000015142	ddx56	100	92.294	Poecilia_reticulata
ENSCVAG00000006499	ddx56	98	64.674	ENSPPYG00000017591	DDX56	98	64.545	Pongo_abelii
ENSCVAG00000006499	ddx56	96	65.121	ENSPCAG00000011499	DDX56	99	64.378	Procavia_capensis
ENSCVAG00000006499	ddx56	99	65.099	ENSPCOG00000024864	DDX56	99	64.376	Propithecus_coquereli
ENSCVAG00000006499	ddx56	87	70.142	ENSPVAG00000000791	DDX56	87	70.142	Pteropus_vampyrus
ENSCVAG00000006499	ddx56	100	81.964	ENSPNYG00000019212	ddx56	100	81.964	Pundamilia_nyererei
ENSCVAG00000006499	ddx56	99	78.777	ENSPNAG00000025446	ddx56	99	78.237	Pygocentrus_nattereri
ENSCVAG00000006499	ddx56	98	65.517	ENSRNOG00000004670	Ddx56	98	64.610	Rattus_norvegicus
ENSCVAG00000006499	ddx56	98	64.674	ENSRBIG00000030140	DDX56	98	64.312	Rhinopithecus_bieti
ENSCVAG00000006499	ddx56	98	64.493	ENSRROG00000044428	DDX56	98	64.130	Rhinopithecus_roxellana
ENSCVAG00000006499	ddx56	89	46.182	YLR276C	-	90	46.741	Saccharomyces_cerevisiae
ENSCVAG00000006499	ddx56	99	64.029	ENSSBOG00000034339	DDX56	99	63.899	Saimiri_boliviensis_boliviensis
ENSCVAG00000006499	ddx56	85	66.387	ENSSHAG00000016615	DDX56	97	65.966	Sarcophilus_harrisii
ENSCVAG00000006499	ddx56	99	76.225	ENSSFOG00015012795	ddx56	98	75.862	Scleropages_formosus
ENSCVAG00000006499	ddx56	100	83.126	ENSSMAG00000011280	ddx56	99	84.888	Scophthalmus_maximus
ENSCVAG00000006499	ddx56	100	84.520	ENSSDUG00000023597	ddx56	100	84.698	Seriola_dumerili
ENSCVAG00000006499	ddx56	100	84.342	ENSSLDG00000018369	ddx56	100	84.520	Seriola_lalandi_dorsalis
ENSCVAG00000006499	ddx56	69	77.586	ENSSARG00000014363	DDX56	78	72.464	Sorex_araneus
ENSCVAG00000006499	ddx56	100	69.697	ENSSPUG00000000784	DDX56	97	69.519	Sphenodon_punctatus
ENSCVAG00000006499	ddx56	95	87.453	ENSSPAG00000009392	ddx56	99	87.453	Stegastes_partitus
ENSCVAG00000006499	ddx56	98	64.610	ENSSSCG00000016745	DDX56	99	64.973	Sus_scrofa
ENSCVAG00000006499	ddx56	100	82.301	ENSTRUG00000018623	ddx56	100	81.738	Takifugu_rubripes
ENSCVAG00000006499	ddx56	99	80.708	ENSTNIG00000013593	ddx56	100	80.177	Tetraodon_nigroviridis
ENSCVAG00000006499	ddx56	99	64.079	ENSTBEG00000007119	DDX56	98	63.768	Tupaia_belangeri
ENSCVAG00000006499	ddx56	77	67.130	ENSTTRG00000010552	DDX56	96	63.675	Tursiops_truncatus
ENSCVAG00000006499	ddx56	93	65.193	ENSUAMG00000014194	DDX56	98	64.428	Ursus_americanus
ENSCVAG00000006499	ddx56	93	65.193	ENSUMAG00000009666	DDX56	98	64.428	Ursus_maritimus
ENSCVAG00000006499	ddx56	93	64.457	ENSVVUG00000011905	DDX56	98	64.065	Vulpes_vulpes
ENSCVAG00000006499	ddx56	99	71.171	ENSXETG00000019000	ddx56	99	71.171	Xenopus_tropicalis
ENSCVAG00000006499	ddx56	100	84.946	ENSXCOG00000017413	ddx56	99	84.946	Xiphophorus_couchianus
ENSCVAG00000006499	ddx56	100	92.115	ENSXMAG00000018749	ddx56	100	91.935	Xiphophorus_maculatus