EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000006500 (Gene tree)
Gene ID: 107100844
Gene Symbol: -
Alias: -
Full Name: secretion associated Ras related GTPase 1A
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 5818 bases
Position: chrKL653519.1:220376-226193
Accession: 107100844
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000005147	MMR_HSR1	PF01926.23	4.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007162	-	599	XM_015399495	ENSCVAP00000005147	198 (aa)	XP_015254981	UPI000742B53E

Gene Model

Click here to download ENSCVAG00000006500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006500's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000006500	-	95	32.804	ENSCVAG00000010611	arl3l2	95	32.804
ENSCVAG00000006500	-	72	36.486	ENSCVAG00000023139	-	74	36.486
ENSCVAG00000006500	-	91	31.492	ENSCVAG00000013374	-	94	31.492
ENSCVAG00000006500	-	87	32.000	ENSCVAG00000011381	-	89	32.000
ENSCVAG00000006500	-	73	36.111	ENSCVAG00000008445	arl2	78	36.111
ENSCVAG00000006500	-	86	33.721	ENSCVAG00000005239	ARL8B	96	33.721
ENSCVAG00000006500	-	88	30.726	ENSCVAG00000015183	ARL6	90	30.726
ENSCVAG00000006500	-	87	30.233	ENSCVAG00000021960	arl3	88	30.233
ENSCVAG00000006500	-	92	31.183	ENSCVAG00000001545	arl13b	72	31.183
ENSCVAG00000006500	-	91	32.258	ENSCVAG00000021619	-	96	32.258
ENSCVAG00000006500	-	88	33.523	ENSCVAG00000019595	arl11	95	33.523
ENSCVAG00000006500	-	66	39.706	ENSCVAG00000004305	arl4aa	64	39.706
ENSCVAG00000006500	-	89	31.073	ENSCVAG00000001731	arl1	91	31.073
ENSCVAG00000006500	-	86	30.994	ENSCVAG00000016797	-	87	30.994
ENSCVAG00000006500	-	85	30.952	ENSCVAG00000006913	arl8	87	30.952
ENSCVAG00000006500	-	87	31.609	ENSCVAG00000009124	ARF5	89	31.609
ENSCVAG00000006500	-	69	33.577	ENSCVAG00000000745	arf2b	85	33.577
ENSCVAG00000006500	-	70	31.847	ENSCVAG00000016249	ARL6	83	31.847
ENSCVAG00000006500	-	100	83.838	ENSCVAG00000022959	sar1b	100	83.838
ENSCVAG00000006500	-	91	32.258	ENSCVAG00000018314	-	96	32.258
ENSCVAG00000006500	-	100	78.283	ENSCVAG00000015162	sar1ab	100	78.283
ENSCVAG00000006500	-	87	31.609	ENSCVAG00000007314	-	89	31.609
ENSCVAG00000006500	-	62	36.585	ENSCVAG00000013902	-	76	36.585
ENSCVAG00000006500	-	97	31.795	ENSCVAG00000020378	arl8ba	93	31.795
ENSCVAG00000006500	-	64	35.878	ENSCVAG00000020902	arl4cb	68	35.878

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006500	-	100	76.768	ENSACIG00000019827	sar1ab	100	76.768	Amphilophus_citrinellus
ENSCVAG00000006500	-	100	78.283	ENSAOCG00000022062	sar1ab	100	78.283	Amphiprion_ocellaris
ENSCVAG00000006500	-	100	78.283	ENSAPEG00000011525	sar1ab	100	78.283	Amphiprion_percula
ENSCVAG00000006500	-	100	81.313	ENSATEG00000003466	sar1ab	100	81.313	Anabas_testudineus
ENSCVAG00000006500	-	100	75.758	ENSACLG00000013053	sar1ab	100	75.758	Astatotilapia_calliptera
ENSCVAG00000006500	-	100	80.808	ENSCSEG00000004825	sar1ab	100	80.808	Cynoglossus_semilaevis
ENSCVAG00000006500	-	100	81.313	ENSDARG00000033320	sar1ab	100	81.313	Danio_rerio
ENSCVAG00000006500	-	100	86.869	ENSELUG00000013652	sar1a	100	86.869	Esox_lucius
ENSCVAG00000006500	-	100	81.313	ENSELUG00000024279	sar1ab	100	81.313	Esox_lucius
ENSCVAG00000006500	-	100	79.293	ENSFHEG00000021773	sar1ab	100	79.293	Fundulus_heteroclitus
ENSCVAG00000006500	-	100	95.455	ENSFHEG00000012352	-	100	95.455	Fundulus_heteroclitus
ENSCVAG00000006500	-	100	78.788	ENSGMOG00000012588	sar1ab	100	78.788	Gadus_morhua
ENSCVAG00000006500	-	100	79.293	ENSGAFG00000009702	sar1ab	100	79.293	Gambusia_affinis
ENSCVAG00000006500	-	100	94.949	ENSGAFG00000004846	-	100	94.949	Gambusia_affinis
ENSCVAG00000006500	-	100	81.313	ENSGACG00000008616	sar1ab	100	81.313	Gasterosteus_aculeatus
ENSCVAG00000006500	-	100	76.263	ENSHBUG00000021221	sar1ab	100	76.263	Haplochromis_burtoni
ENSCVAG00000006500	-	100	79.798	ENSHCOG00000002845	sar1ab	80	79.798	Hippocampus_comes
ENSCVAG00000006500	-	100	78.283	ENSKMAG00000018006	sar1ab	100	78.283	Kryptolebias_marmoratus
ENSCVAG00000006500	-	100	80.808	ENSLBEG00000001114	sar1ab	100	80.808	Labrus_bergylta
ENSCVAG00000006500	-	100	79.798	ENSMAMG00000021314	sar1ab	100	79.798	Mastacembelus_armatus
ENSCVAG00000006500	-	100	75.758	ENSMZEG00005027606	sar1ab	100	75.758	Maylandia_zebra
ENSCVAG00000006500	-	100	80.808	ENSMMOG00000010360	sar1ab	100	80.808	Mola_mola
ENSCVAG00000006500	-	100	79.293	ENSMALG00000005831	sar1ab	100	79.293	Monopterus_albus
ENSCVAG00000006500	-	100	76.263	ENSNBRG00000018772	sar1ab	100	76.263	Neolamprologus_brichardi
ENSCVAG00000006500	-	100	77.273	ENSONIG00000018509	sar1ab	100	77.273	Oreochromis_niloticus
ENSCVAG00000006500	-	100	88.384	ENSORLG00000009132	-	90	88.384	Oryzias_latipes
ENSCVAG00000006500	-	100	80.303	ENSORLG00000006779	sar1ab	67	80.303	Oryzias_latipes
ENSCVAG00000006500	-	100	88.384	ENSORLG00020007024	-	90	88.384	Oryzias_latipes_hni
ENSCVAG00000006500	-	100	80.808	ENSORLG00020005458	sar1ab	100	80.808	Oryzias_latipes_hni
ENSCVAG00000006500	-	100	80.303	ENSORLG00015010542	sar1ab	100	80.303	Oryzias_latipes_hsok
ENSCVAG00000006500	-	100	88.889	ENSORLG00015006223	-	94	93.750	Oryzias_latipes_hsok
ENSCVAG00000006500	-	100	80.808	ENSOMEG00000004948	sar1ab	100	80.808	Oryzias_melastigma
ENSCVAG00000006500	-	100	87.879	ENSOMEG00000012020	-	100	87.879	Oryzias_melastigma
ENSCVAG00000006500	-	100	82.323	ENSPKIG00000007615	sar1ab	100	82.323	Paramormyrops_kingsleyae
ENSCVAG00000006500	-	100	81.313	ENSPMGG00000013330	sar1ab	100	81.313	Periophthalmus_magnuspinnatus
ENSCVAG00000006500	-	100	79.798	ENSPFOG00000023432	sar1ab	100	79.798	Poecilia_formosa
ENSCVAG00000006500	-	100	80.303	ENSPLAG00000023705	sar1ab	100	80.303	Poecilia_latipinna
ENSCVAG00000006500	-	100	79.798	ENSPMEG00000000559	sar1ab	100	79.798	Poecilia_mexicana
ENSCVAG00000006500	-	100	94.949	ENSPMEG00000001717	-	100	94.949	Poecilia_mexicana
ENSCVAG00000006500	-	100	79.798	ENSPREG00000016098	sar1ab	100	79.798	Poecilia_reticulata
ENSCVAG00000006500	-	100	76.263	ENSPNYG00000011603	sar1ab	100	76.263	Pundamilia_nyererei
ENSCVAG00000006500	-	100	80.808	ENSPNAG00000008007	sar1ab	100	80.808	Pygocentrus_nattereri
ENSCVAG00000006500	-	100	85.354	ENSSFOG00015014010	sar1a	100	85.354	Scleropages_formosus
ENSCVAG00000006500	-	72	72.727	ENSSMAG00000020758	sar1ab	95	72.727	Scophthalmus_maximus
ENSCVAG00000006500	-	100	80.303	ENSSDUG00000010773	sar1ab	100	80.303	Seriola_dumerili
ENSCVAG00000006500	-	100	80.303	ENSSLDG00000025558	sar1ab	100	80.303	Seriola_lalandi_dorsalis
ENSCVAG00000006500	-	100	78.788	ENSSPAG00000009194	sar1ab	100	78.788	Stegastes_partitus
ENSCVAG00000006500	-	100	79.293	ENSTRUG00000007269	sar1ab	100	79.293	Takifugu_rubripes
ENSCVAG00000006500	-	100	77.778	ENSTNIG00000008635	sar1ab	100	77.778	Tetraodon_nigroviridis
ENSCVAG00000006500	-	100	79.798	ENSXMAG00000003130	sar1ab	100	79.798	Xiphophorus_maculatus
ENSCVAG00000006500	-	100	95.455	ENSXMAG00000026223	SAR1A	100	95.455	Xiphophorus_maculatus