EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000006511 (Gene tree)
Gene ID: 107094474
Gene Symbol: mrps18a
Alias: si:ch211-117l16.3|zgc:152724
Full Name: mitochondrial ribosomal protein S18A
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 8141 bases
Position: chrKL652985.1:270280-278420
Accession: 107094474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000005172	Ribosomal_S18	PF01084.20	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007130	-	1368	XM_015390075	ENSCVAP00000005172	208 (aa)	XP_015245561	UPI000742937E

Gene Model

Click here to download ENSCVAG00000006511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006511's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006511	mrps18a	79	67.470	ENSG00000096080	MRPS18A	84	67.470	Homo_sapiens
ENSCVAG00000006511	mrps18a	79	66.867	ENSAMEG00000012117	MRPS18A	84	66.867	Ailuropoda_melanoleuca
ENSCVAG00000006511	mrps18a	100	80.288	ENSACIG00000017782	mrps18a	100	80.288	Amphilophus_citrinellus
ENSCVAG00000006511	mrps18a	66	75.912	ENSAOCG00000005723	mrps18a	81	75.912	Amphiprion_ocellaris
ENSCVAG00000006511	mrps18a	100	77.404	ENSAPEG00000006971	mrps18a	100	77.404	Amphiprion_percula
ENSCVAG00000006511	mrps18a	100	79.327	ENSATEG00000003132	mrps18a	100	79.327	Anabas_testudineus
ENSCVAG00000006511	mrps18a	76	72.327	ENSAPLG00000016280	MRPS18A	100	72.327	Anas_platyrhynchos
ENSCVAG00000006511	mrps18a	80	67.066	ENSACAG00000000642	MRPS18A	87	67.066	Anolis_carolinensis
ENSCVAG00000006511	mrps18a	79	66.867	ENSANAG00000030889	MRPS18A	84	66.867	Aotus_nancymaae
ENSCVAG00000006511	mrps18a	100	77.885	ENSACLG00000008170	mrps18a	100	77.885	Astatotilapia_calliptera
ENSCVAG00000006511	mrps18a	54	80.702	ENSAMXG00000036055	-	84	80.702	Astyanax_mexicanus
ENSCVAG00000006511	mrps18a	79	74.545	ENSAMXG00000036348	mrps18a	78	74.545	Astyanax_mexicanus
ENSCVAG00000006511	mrps18a	79	67.470	ENSBTAG00000025571	MRPS18A	84	67.470	Bos_taurus
ENSCVAG00000006511	mrps18a	69	30.769	WBGene00022583	mrps-18A	73	30.769	Caenorhabditis_elegans
ENSCVAG00000006511	mrps18a	100	58.571	ENSCJAG00000017382	MRPS18A	100	58.571	Callithrix_jacchus
ENSCVAG00000006511	mrps18a	79	66.265	ENSCAFG00000001928	MRPS18A	84	66.265	Canis_familiaris
ENSCVAG00000006511	mrps18a	79	66.265	ENSCAFG00020012064	MRPS18A	70	66.265	Canis_lupus_dingo
ENSCVAG00000006511	mrps18a	79	66.867	ENSCHIG00000013039	MRPS18A	84	66.867	Capra_hircus
ENSCVAG00000006511	mrps18a	82	65.698	ENSTSYG00000001390	MRPS18A	87	65.698	Carlito_syrichta
ENSCVAG00000006511	mrps18a	67	68.571	ENSCAPG00000016029	MRPS18A	87	68.571	Cavia_aperea
ENSCVAG00000006511	mrps18a	78	65.854	ENSCPOG00000022949	MRPS18A	83	65.854	Cavia_porcellus
ENSCVAG00000006511	mrps18a	77	67.702	ENSCCAG00000021108	MRPS18A	82	67.702	Cebus_capucinus
ENSCVAG00000006511	mrps18a	79	67.470	ENSCATG00000012963	MRPS18A	99	57.895	Cercocebus_atys
ENSCVAG00000006511	mrps18a	84	62.500	ENSCLAG00000012929	MRPS18A	89	62.500	Chinchilla_lanigera
ENSCVAG00000006511	mrps18a	79	67.470	ENSCSAG00000012127	MRPS18A	99	57.073	Chlorocebus_sabaeus
ENSCVAG00000006511	mrps18a	100	57.212	ENSCPBG00000025243	MRPS18A	100	57.212	Chrysemys_picta_bellii
ENSCVAG00000006511	mrps18a	88	36.898	ENSCING00000024771	-	94	36.898	Ciona_intestinalis
ENSCVAG00000006511	mrps18a	81	34.503	ENSCSAVG00000009539	-	95	34.503	Ciona_savignyi
ENSCVAG00000006511	mrps18a	97	60.099	ENSCANG00000039873	MRPS18A	96	60.099	Colobus_angolensis_palliatus
ENSCVAG00000006511	mrps18a	79	61.446	ENSCGRG00001017882	Mrps18a	89	61.446	Cricetulus_griseus_chok1gshd
ENSCVAG00000006511	mrps18a	79	50.303	ENSCGRG00000000079	Mrps18a	84	50.303	Cricetulus_griseus_crigri
ENSCVAG00000006511	mrps18a	100	76.923	ENSCSEG00000019650	mrps18a	100	74.641	Cynoglossus_semilaevis
ENSCVAG00000006511	mrps18a	100	64.929	ENSDARG00000024465	mrps18a	100	66.825	Danio_rerio
ENSCVAG00000006511	mrps18a	79	66.867	ENSDNOG00000035755	MRPS18A	84	66.867	Dasypus_novemcinctus
ENSCVAG00000006511	mrps18a	99	58.173	ENSDORG00000014583	Mrps18a	99	58.173	Dipodomys_ordii
ENSCVAG00000006511	mrps18a	72	31.818	FBgn0051450	mRpS18A	98	31.818	Drosophila_melanogaster
ENSCVAG00000006511	mrps18a	71	55.376	ENSETEG00000014171	MRPS18A	100	55.376	Echinops_telfairi
ENSCVAG00000006511	mrps18a	67	72.340	ENSEASG00005003485	MRPS18A	51	72.340	Equus_asinus_asinus
ENSCVAG00000006511	mrps18a	67	71.631	ENSECAG00000004870	MRPS18A	51	71.631	Equus_caballus
ENSCVAG00000006511	mrps18a	100	71.429	ENSELUG00000005253	mrps18a	100	71.429	Esox_lucius
ENSCVAG00000006511	mrps18a	79	68.675	ENSFCAG00000036031	MRPS18A	84	68.675	Felis_catus
ENSCVAG00000006511	mrps18a	100	60.190	ENSFALG00000011356	MRPS18A	100	60.190	Ficedula_albicollis
ENSCVAG00000006511	mrps18a	82	59.302	ENSFDAG00000012875	MRPS18A	85	59.302	Fukomys_damarensis
ENSCVAG00000006511	mrps18a	100	86.538	ENSFHEG00000009014	mrps18a	100	86.538	Fundulus_heteroclitus
ENSCVAG00000006511	mrps18a	100	67.943	ENSGMOG00000012493	mrps18a	100	67.943	Gadus_morhua
ENSCVAG00000006511	mrps18a	78	61.350	ENSGALG00000010296	MRPS18A	100	61.350	Gallus_gallus
ENSCVAG00000006511	mrps18a	100	85.577	ENSGAFG00000005211	mrps18a	100	85.577	Gambusia_affinis
ENSCVAG00000006511	mrps18a	100	74.519	ENSGACG00000013370	mrps18a	100	74.519	Gasterosteus_aculeatus
ENSCVAG00000006511	mrps18a	71	69.595	ENSGAGG00000017954	MRPS18A	79	69.595	Gopherus_agassizii
ENSCVAG00000006511	mrps18a	79	67.470	ENSGGOG00000006303	-	84	67.470	Gorilla_gorilla
ENSCVAG00000006511	mrps18a	100	77.885	ENSHBUG00000014682	mrps18a	100	77.885	Haplochromis_burtoni
ENSCVAG00000006511	mrps18a	79	66.265	ENSHGLG00000014356	MRPS18A	84	66.265	Heterocephalus_glaber_female
ENSCVAG00000006511	mrps18a	79	66.265	ENSHGLG00100010988	MRPS18A	84	66.265	Heterocephalus_glaber_male
ENSCVAG00000006511	mrps18a	100	75.000	ENSHCOG00000000856	mrps18a	100	75.000	Hippocampus_comes
ENSCVAG00000006511	mrps18a	100	67.773	ENSIPUG00000017406	mrps18a	100	68.720	Ictalurus_punctatus
ENSCVAG00000006511	mrps18a	80	63.483	ENSSTOG00000004490	MRPS18A	86	63.483	Ictidomys_tridecemlineatus
ENSCVAG00000006511	mrps18a	79	68.072	ENSJJAG00000006567	Mrps18a	84	68.072	Jaculus_jaculus
ENSCVAG00000006511	mrps18a	100	79.327	ENSKMAG00000014910	mrps18a	100	79.327	Kryptolebias_marmoratus
ENSCVAG00000006511	mrps18a	100	77.404	ENSLBEG00000003391	mrps18a	99	77.404	Labrus_bergylta
ENSCVAG00000006511	mrps18a	100	53.110	ENSLACG00000022160	mrps18a	100	53.110	Latimeria_chalumnae
ENSCVAG00000006511	mrps18a	100	64.762	ENSLOCG00000016008	mrps18a	100	64.762	Lepisosteus_oculatus
ENSCVAG00000006511	mrps18a	85	63.687	ENSLAFG00000001168	MRPS18A	91	63.687	Loxodonta_africana
ENSCVAG00000006511	mrps18a	79	67.470	ENSMFAG00000038311	MRPS18A	99	57.073	Macaca_fascicularis
ENSCVAG00000006511	mrps18a	79	67.470	ENSMMUG00000014749	MRPS18A	99	57.073	Macaca_mulatta
ENSCVAG00000006511	mrps18a	79	67.470	ENSMNEG00000044642	MRPS18A	99	57.073	Macaca_nemestrina
ENSCVAG00000006511	mrps18a	76	67.925	ENSMLEG00000041828	MRPS18A	100	67.925	Mandrillus_leucophaeus
ENSCVAG00000006511	mrps18a	100	78.846	ENSMAMG00000015478	mrps18a	100	78.846	Mastacembelus_armatus
ENSCVAG00000006511	mrps18a	100	77.885	ENSMZEG00005014925	mrps18a	100	77.885	Maylandia_zebra
ENSCVAG00000006511	mrps18a	100	60.287	ENSMGAG00000010915	MRPS18A	100	60.287	Meleagris_gallopavo
ENSCVAG00000006511	mrps18a	79	67.470	ENSMICG00000005062	MRPS18A	84	67.470	Microcebus_murinus
ENSCVAG00000006511	mrps18a	79	66.867	ENSMOCG00000021207	-	84	66.867	Microtus_ochrogaster
ENSCVAG00000006511	mrps18a	79	62.651	ENSMOCG00000015168	-	87	62.651	Microtus_ochrogaster
ENSCVAG00000006511	mrps18a	100	76.923	ENSMMOG00000015248	mrps18a	100	76.923	Mola_mola
ENSCVAG00000006511	mrps18a	79	54.545	ENSMODG00000018952	MRPS18A	87	54.545	Monodelphis_domestica
ENSCVAG00000006511	mrps18a	100	80.288	ENSMALG00000017044	mrps18a	91	80.288	Monopterus_albus
ENSCVAG00000006511	mrps18a	79	65.663	MGP_CAROLIEiJ_G0021656	Mrps18a	84	65.663	Mus_caroli
ENSCVAG00000006511	mrps18a	79	65.663	ENSMUSG00000023967	Mrps18a	84	65.663	Mus_musculus
ENSCVAG00000006511	mrps18a	79	65.663	MGP_PahariEiJ_G0020648	Mrps18a	84	65.663	Mus_pahari
ENSCVAG00000006511	mrps18a	79	65.663	MGP_SPRETEiJ_G0022568	Mrps18a	84	65.663	Mus_spretus
ENSCVAG00000006511	mrps18a	100	58.411	ENSMPUG00000012868	MRPS18A	83	58.411	Mustela_putorius_furo
ENSCVAG00000006511	mrps18a	78	68.712	ENSMLUG00000017755	MRPS18A	83	68.712	Myotis_lucifugus
ENSCVAG00000006511	mrps18a	100	56.459	ENSNGAG00000020052	Mrps18a	100	56.459	Nannospalax_galili
ENSCVAG00000006511	mrps18a	100	78.846	ENSNBRG00000021152	mrps18a	100	78.846	Neolamprologus_brichardi
ENSCVAG00000006511	mrps18a	79	66.867	ENSNLEG00000003865	MRPS18A	84	66.867	Nomascus_leucogenys
ENSCVAG00000006511	mrps18a	98	45.736	ENSMEUG00000013986	MRPS18A	99	45.349	Notamacropus_eugenii
ENSCVAG00000006511	mrps18a	82	63.462	ENSOPRG00000007680	MRPS18A	70	63.462	Ochotona_princeps
ENSCVAG00000006511	mrps18a	79	66.265	ENSODEG00000015388	MRPS18A	84	66.265	Octodon_degus
ENSCVAG00000006511	mrps18a	100	78.846	ENSONIG00000000609	mrps18a	100	78.846	Oreochromis_niloticus
ENSCVAG00000006511	mrps18a	75	67.949	ENSOANG00000001955	MRPS18A	97	67.949	Ornithorhynchus_anatinus
ENSCVAG00000006511	mrps18a	100	57.143	ENSOCUG00000005544	MRPS18A	100	57.143	Oryctolagus_cuniculus
ENSCVAG00000006511	mrps18a	100	77.619	ENSORLG00000023864	mrps18a	100	77.619	Oryzias_latipes
ENSCVAG00000006511	mrps18a	100	77.143	ENSORLG00020002882	mrps18a	100	77.143	Oryzias_latipes_hni
ENSCVAG00000006511	mrps18a	100	77.033	ENSORLG00015022065	mrps18a	100	77.033	Oryzias_latipes_hsok
ENSCVAG00000006511	mrps18a	100	74.038	ENSOMEG00000018124	mrps18a	100	74.038	Oryzias_melastigma
ENSCVAG00000006511	mrps18a	79	67.470	ENSOGAG00000026551	MRPS18A	84	67.470	Otolemur_garnettii
ENSCVAG00000006511	mrps18a	79	66.867	ENSOARG00000008279	MRPS18A	84	66.867	Ovis_aries
ENSCVAG00000006511	mrps18a	79	67.470	ENSPPAG00000036291	MRPS18A	84	67.470	Pan_paniscus
ENSCVAG00000006511	mrps18a	79	68.072	ENSPPRG00000006429	MRPS18A	84	68.072	Panthera_pardus
ENSCVAG00000006511	mrps18a	79	68.072	ENSPTIG00000001653	MRPS18A	84	68.072	Panthera_tigris_altaica
ENSCVAG00000006511	mrps18a	79	67.470	ENSPTRG00000018209	MRPS18A	84	67.470	Pan_troglodytes
ENSCVAG00000006511	mrps18a	79	67.470	ENSPANG00000006967	MRPS18A	99	57.073	Papio_anubis
ENSCVAG00000006511	mrps18a	97	67.822	ENSPKIG00000012807	mrps18a	87	68.137	Paramormyrops_kingsleyae
ENSCVAG00000006511	mrps18a	89	56.452	ENSPSIG00000013672	MRPS18A	96	56.452	Pelodiscus_sinensis
ENSCVAG00000006511	mrps18a	100	69.048	ENSPMGG00000000493	mrps18a	100	69.048	Periophthalmus_magnuspinnatus
ENSCVAG00000006511	mrps18a	79	65.663	ENSPEMG00000000405	Mrps18a	84	65.663	Peromyscus_maniculatus_bairdii
ENSCVAG00000006511	mrps18a	85	66.102	ENSPMAG00000007012	mrps18a	96	66.102	Petromyzon_marinus
ENSCVAG00000006511	mrps18a	83	64.368	ENSPCIG00000024858	MRPS18A	88	64.368	Phascolarctos_cinereus
ENSCVAG00000006511	mrps18a	76	92.453	ENSPFOG00000009046	mrps18a	100	92.453	Poecilia_formosa
ENSCVAG00000006511	mrps18a	100	88.942	ENSPLAG00000011106	mrps18a	100	88.942	Poecilia_latipinna
ENSCVAG00000006511	mrps18a	100	88.462	ENSPMEG00000000736	mrps18a	100	88.462	Poecilia_mexicana
ENSCVAG00000006511	mrps18a	100	87.500	ENSPREG00000012172	mrps18a	95	87.500	Poecilia_reticulata
ENSCVAG00000006511	mrps18a	99	58.654	ENSPPYG00000017282	MRPS18A	99	58.654	Pongo_abelii
ENSCVAG00000006511	mrps18a	75	52.913	ENSPCAG00000004192	MRPS18A	99	52.913	Procavia_capensis
ENSCVAG00000006511	mrps18a	79	66.867	ENSPCOG00000014911	MRPS18A	84	66.867	Propithecus_coquereli
ENSCVAG00000006511	mrps18a	79	69.149	ENSPVAG00000002758	MRPS18A	69	69.149	Pteropus_vampyrus
ENSCVAG00000006511	mrps18a	100	77.885	ENSPNYG00000014753	mrps18a	100	77.885	Pundamilia_nyererei
ENSCVAG00000006511	mrps18a	100	67.143	ENSPNAG00000023462	mrps18a	100	67.773	Pygocentrus_nattereri
ENSCVAG00000006511	mrps18a	79	65.663	ENSRNOG00000019511	Mrps18a	84	65.663	Rattus_norvegicus
ENSCVAG00000006511	mrps18a	77	68.323	ENSRBIG00000028789	MRPS18A	82	68.323	Rhinopithecus_bieti
ENSCVAG00000006511	mrps18a	77	68.323	ENSRROG00000042368	-	82	68.323	Rhinopithecus_roxellana
ENSCVAG00000006511	mrps18a	78	67.073	ENSSBOG00000019943	MRPS18A	83	67.073	Saimiri_boliviensis_boliviensis
ENSCVAG00000006511	mrps18a	79	68.072	ENSSHAG00000015048	-	84	68.072	Sarcophilus_harrisii
ENSCVAG00000006511	mrps18a	100	64.762	ENSSFOG00015005628	mrps18a	100	64.762	Scleropages_formosus
ENSCVAG00000006511	mrps18a	100	74.038	ENSSMAG00000009353	mrps18a	100	74.038	Scophthalmus_maximus
ENSCVAG00000006511	mrps18a	100	72.596	ENSSDUG00000011655	mrps18a	100	72.596	Seriola_dumerili
ENSCVAG00000006511	mrps18a	100	74.519	ENSSLDG00000025435	mrps18a	100	74.519	Seriola_lalandi_dorsalis
ENSCVAG00000006511	mrps18a	100	62.981	ENSSPUG00000011517	MRPS18A	100	62.981	Sphenodon_punctatus
ENSCVAG00000006511	mrps18a	100	79.808	ENSSPAG00000000034	mrps18a	100	79.808	Stegastes_partitus
ENSCVAG00000006511	mrps18a	79	68.072	ENSSSCG00000001692	MRPS18A	84	68.072	Sus_scrofa
ENSCVAG00000006511	mrps18a	71	68.919	ENSTGUG00000008142	MRPS18A	100	68.919	Taeniopygia_guttata
ENSCVAG00000006511	mrps18a	100	78.846	ENSTRUG00000025134	mrps18a	100	78.846	Takifugu_rubripes
ENSCVAG00000006511	mrps18a	100	77.885	ENSTNIG00000016302	mrps18a	100	77.885	Tetraodon_nigroviridis
ENSCVAG00000006511	mrps18a	76	42.601	ENSTBEG00000004094	MRPS18A	87	42.601	Tupaia_belangeri
ENSCVAG00000006511	mrps18a	76	69.318	ENSTTRG00000006354	MRPS18A	65	69.318	Tursiops_truncatus
ENSCVAG00000006511	mrps18a	79	66.867	ENSUAMG00000013758	MRPS18A	84	66.867	Ursus_americanus
ENSCVAG00000006511	mrps18a	79	66.265	ENSUMAG00000005910	MRPS18A	84	66.265	Ursus_maritimus
ENSCVAG00000006511	mrps18a	64	62.044	ENSVVUG00000022444	-	68	62.044	Vulpes_vulpes
ENSCVAG00000006511	mrps18a	79	66.265	ENSVVUG00000029092	-	84	66.265	Vulpes_vulpes
ENSCVAG00000006511	mrps18a	69	60.417	ENSXETG00000003270	mrps18a	93	60.417	Xenopus_tropicalis
ENSCVAG00000006511	mrps18a	100	78.365	ENSXCOG00000007223	mrps18a	100	78.365	Xiphophorus_couchianus
ENSCVAG00000006511	mrps18a	100	87.981	ENSXMAG00000004867	mrps18a	100	87.981	Xiphophorus_maculatus