EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000006550 (Gene tree)
Gene ID: -
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 16297 bases
Position: chrKL653024.1:244839-261135
Accession: 107095105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000023268	CPL	PF08144.11	2e-46	1	1
ENSCVAP00000005150	CPL	PF08144.11	4.5e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007160	-	1173	-	ENSCVAP00000005150	390 (aa)	-	-
ENSCVAT00000007175	-	1242	XM_015391078	ENSCVAP00000023268	413 (aa)	XP_015246564	-

Gene Model

Click here to download ENSCVAG00000006550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006550's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006550	pum3	74	53.309	ENSG00000080608	PUM3	98	52.083	Homo_sapiens
ENSCVAG00000006550	pum3	100	70.979	ENSAPOG00000020252	pum3	70	70.979	Acanthochromis_polyacanthus
ENSCVAG00000006550	pum3	74	53.506	ENSAMEG00000012187	PUM3	61	52.788	Ailuropoda_melanoleuca
ENSCVAG00000006550	pum3	87	74.170	ENSACIG00000009786	pum3	65	74.170	Amphilophus_citrinellus
ENSCVAG00000006550	pum3	100	70.979	ENSAOCG00000004439	pum3	70	70.979	Amphiprion_ocellaris
ENSCVAG00000006550	pum3	100	70.979	ENSAPEG00000020523	pum3	70	70.979	Amphiprion_percula
ENSCVAG00000006550	pum3	99	72.028	ENSATEG00000005799	pum3	70	72.028	Anabas_testudineus
ENSCVAG00000006550	pum3	75	53.160	ENSAPLG00000002920	PUM3	54	53.160	Anas_platyrhynchos
ENSCVAG00000006550	pum3	90	51.101	ENSACAG00000003174	PUM3	74	51.101	Anolis_carolinensis
ENSCVAG00000006550	pum3	74	53.676	ENSANAG00000024520	PUM3	61	53.704	Aotus_nancymaae
ENSCVAG00000006550	pum3	100	73.897	ENSACLG00000001017	pum3	77	73.897	Astatotilapia_calliptera
ENSCVAG00000006550	pum3	99	57.746	ENSAMXG00000020911	pum3	76	57.746	Astyanax_mexicanus
ENSCVAG00000006550	pum3	94	52.222	ENSBTAG00000013357	PUM3	61	52.222	Bos_taurus
ENSCVAG00000006550	pum3	74	52.963	ENSCJAG00000010917	PUM3	61	52.963	Callithrix_jacchus
ENSCVAG00000006550	pum3	74	52.045	ENSCAFG00000002035	PUM3	73	52.045	Canis_familiaris
ENSCVAG00000006550	pum3	74	52.045	ENSCAFG00020026867	PUM3	73	52.045	Canis_lupus_dingo
ENSCVAG00000006550	pum3	94	52.593	ENSCHIG00000021559	PUM3	61	52.593	Capra_hircus
ENSCVAG00000006550	pum3	98	51.852	ENSTSYG00000007481	PUM3	61	51.852	Carlito_syrichta
ENSCVAG00000006550	pum3	97	48.718	ENSCAPG00000010592	-	61	48.519	Cavia_aperea
ENSCVAG00000006550	pum3	95	51.838	ENSCPOG00000008552	-	51	51.481	Cavia_porcellus
ENSCVAG00000006550	pum3	74	53.676	ENSCCAG00000032650	PUM3	61	52.963	Cebus_capucinus
ENSCVAG00000006550	pum3	92	52.593	ENSCATG00000024880	PUM3	61	52.593	Cercocebus_atys
ENSCVAG00000006550	pum3	98	53.676	ENSCLAG00000011892	PUM3	61	53.333	Chinchilla_lanigera
ENSCVAG00000006550	pum3	74	52.574	ENSCSAG00000008691	PUM3	61	52.593	Chlorocebus_sabaeus
ENSCVAG00000006550	pum3	99	54.275	ENSCPBG00000025470	PUM3	67	54.275	Chrysemys_picta_bellii
ENSCVAG00000006550	pum3	63	31.597	ENSCING00000024199	-	51	31.597	Ciona_intestinalis
ENSCVAG00000006550	pum3	64	33.910	ENSCSAVG00000006072	-	53	32.639	Ciona_savignyi
ENSCVAG00000006550	pum3	92	52.941	ENSCANG00000006142	PUM3	61	52.963	Colobus_angolensis_palliatus
ENSCVAG00000006550	pum3	94	51.838	ENSCGRG00001016402	Pum3	52	51.852	Cricetulus_griseus_chok1gshd
ENSCVAG00000006550	pum3	94	51.838	ENSCGRG00000010207	Pum3	52	51.852	Cricetulus_griseus_crigri
ENSCVAG00000006550	pum3	87	69.849	ENSCSEG00000001565	pum3	64	69.849	Cynoglossus_semilaevis
ENSCVAG00000006550	pum3	99	57.394	ENSDARG00000087779	pum3	88	54.741	Danio_rerio
ENSCVAG00000006550	pum3	74	52.788	ENSETEG00000015331	PUM3	51	52.788	Echinops_telfairi
ENSCVAG00000006550	pum3	74	53.309	ENSEASG00005010350	PUM3	51	52.593	Equus_asinus_asinus
ENSCVAG00000006550	pum3	74	53.309	ENSECAG00000017193	PUM3	51	52.593	Equus_caballus
ENSCVAG00000006550	pum3	80	58.659	ENSEEUG00000010314	PUM3	52	58.333	Erinaceus_europaeus
ENSCVAG00000006550	pum3	98	60.448	ENSELUG00000002215	pum3	63	60.448	Esox_lucius
ENSCVAG00000006550	pum3	99	52.045	ENSFALG00000010509	PUM3	52	52.045	Ficedula_albicollis
ENSCVAG00000006550	pum3	97	53.903	ENSFDAG00000021027	PUM3	60	53.903	Fukomys_damarensis
ENSCVAG00000006550	pum3	100	77.574	ENSFHEG00000015576	pum3	100	77.574	Fundulus_heteroclitus
ENSCVAG00000006550	pum3	76	58.052	ENSGMOG00000014217	pum3	62	58.052	Gadus_morhua
ENSCVAG00000006550	pum3	74	53.160	ENSGALG00000010178	PUM3	53	53.160	Gallus_gallus
ENSCVAG00000006550	pum3	78	71.852	ENSGACG00000017878	pum3	62	71.852	Gasterosteus_aculeatus
ENSCVAG00000006550	pum3	99	53.903	ENSGAGG00000018983	PUM3	73	53.903	Gopherus_agassizii
ENSCVAG00000006550	pum3	74	53.309	ENSGGOG00000006143	PUM3	61	53.333	Gorilla_gorilla
ENSCVAG00000006550	pum3	92	81.166	ENSHBUG00000012903	pum3	69	80.269	Haplochromis_burtoni
ENSCVAG00000006550	pum3	74	53.875	ENSHGLG00000015868	-	61	53.532	Heterocephalus_glaber_female
ENSCVAG00000006550	pum3	74	53.875	ENSHGLG00100018825	PUM3	61	53.532	Heterocephalus_glaber_male
ENSCVAG00000006550	pum3	100	68.182	ENSHCOG00000010306	pum3	72	68.182	Hippocampus_comes
ENSCVAG00000006550	pum3	99	58.596	ENSIPUG00000024801	pum3	78	58.246	Ictalurus_punctatus
ENSCVAG00000006550	pum3	99	52.941	ENSSTOG00000009586	PUM3	61	52.222	Ictidomys_tridecemlineatus
ENSCVAG00000006550	pum3	97	52.030	ENSJJAG00000012563	Pum3	52	51.301	Jaculus_jaculus
ENSCVAG00000006550	pum3	99	75.735	ENSKMAG00000010277	pum3	68	75.735	Kryptolebias_marmoratus
ENSCVAG00000006550	pum3	100	68.881	ENSLBEG00000012213	pum3	70	68.881	Labrus_bergylta
ENSCVAG00000006550	pum3	99	52.066	ENSLACG00000008312	PUM3	66	52.720	Latimeria_chalumnae
ENSCVAG00000006550	pum3	100	54.545	ENSLOCG00000012529	pum3	78	54.545	Lepisosteus_oculatus
ENSCVAG00000006550	pum3	74	53.875	ENSLAFG00000017341	PUM3	70	53.160	Loxodonta_africana
ENSCVAG00000006550	pum3	74	52.941	ENSMFAG00000001430	PUM3	61	52.963	Macaca_fascicularis
ENSCVAG00000006550	pum3	74	52.941	ENSMMUG00000002362	PUM3	60	52.963	Macaca_mulatta
ENSCVAG00000006550	pum3	74	52.941	ENSMNEG00000035288	PUM3	61	52.963	Macaca_nemestrina
ENSCVAG00000006550	pum3	74	52.574	ENSMLEG00000034820	PUM3	61	52.593	Mandrillus_leucophaeus
ENSCVAG00000006550	pum3	100	69.231	ENSMAMG00000022861	pum3	66	69.231	Mastacembelus_armatus
ENSCVAG00000006550	pum3	100	73.529	ENSMZEG00005014205	pum3	75	73.529	Maylandia_zebra
ENSCVAG00000006550	pum3	75	48.327	ENSMGAG00000002255	PUM3	54	56.828	Meleagris_gallopavo
ENSCVAG00000006550	pum3	99	51.103	ENSMAUG00000009733	Pum3	62	51.111	Mesocricetus_auratus
ENSCVAG00000006550	pum3	98	52.574	ENSMICG00000045916	PUM3	54	51.852	Microcebus_murinus
ENSCVAG00000006550	pum3	99	48.789	ENSMOCG00000014830	-	63	48.951	Microtus_ochrogaster
ENSCVAG00000006550	pum3	94	57.674	ENSMOCG00000019519	-	62	51.852	Microtus_ochrogaster
ENSCVAG00000006550	pum3	94	58.672	ENSMMOG00000012184	pum3	63	58.456	Mola_mola
ENSCVAG00000006550	pum3	100	70.629	ENSMALG00000022164	pum3	65	70.280	Monopterus_albus
ENSCVAG00000006550	pum3	95	50.368	MGP_CAROLIEiJ_G0022845	Pum3	62	50.370	Mus_caroli
ENSCVAG00000006550	pum3	95	49.632	ENSMUSG00000041360	Pum3	62	49.630	Mus_musculus
ENSCVAG00000006550	pum3	95	50.368	MGP_PahariEiJ_G0014338	Pum3	62	50.370	Mus_pahari
ENSCVAG00000006550	pum3	95	50.000	MGP_SPRETEiJ_G0023763	Pum3	62	50.000	Mus_spretus
ENSCVAG00000006550	pum3	98	51.661	ENSMPUG00000005125	PUM3	62	50.929	Mustela_putorius_furo
ENSCVAG00000006550	pum3	99	51.471	ENSMLUG00000002309	PUM3	51	50.936	Myotis_lucifugus
ENSCVAG00000006550	pum3	91	77.500	ENSNBRG00000021370	pum3	56	77.500	Neolamprologus_brichardi
ENSCVAG00000006550	pum3	74	53.309	ENSNLEG00000008712	PUM3	61	53.333	Nomascus_leucogenys
ENSCVAG00000006550	pum3	74	53.309	ENSODEG00000003625	-	51	52.963	Octodon_degus
ENSCVAG00000006550	pum3	98	48.718	ENSODEG00000016477	-	62	48.897	Octodon_degus
ENSCVAG00000006550	pum3	100	74.265	ENSONIG00000012733	pum3	77	74.265	Oreochromis_niloticus
ENSCVAG00000006550	pum3	74	49.446	ENSOANG00000014995	PUM3	61	48.529	Ornithorhynchus_anatinus
ENSCVAG00000006550	pum3	74	51.471	ENSOCUG00000004189	-	61	51.481	Oryctolagus_cuniculus
ENSCVAG00000006550	pum3	74	51.838	ENSOCUG00000026104	-	62	51.852	Oryctolagus_cuniculus
ENSCVAG00000006550	pum3	100	69.231	ENSORLG00000014935	pum3	70	69.231	Oryzias_latipes
ENSCVAG00000006550	pum3	100	68.881	ENSORLG00020002841	pum3	70	68.881	Oryzias_latipes_hni
ENSCVAG00000006550	pum3	100	69.231	ENSORLG00015015906	pum3	70	69.231	Oryzias_latipes_hsok
ENSCVAG00000006550	pum3	100	66.434	ENSOMEG00000009427	pum3	70	66.084	Oryzias_melastigma
ENSCVAG00000006550	pum3	93	53.309	ENSOGAG00000008125	-	61	52.593	Otolemur_garnettii
ENSCVAG00000006550	pum3	94	52.222	ENSOARG00000013337	PUM3	61	52.222	Ovis_aries
ENSCVAG00000006550	pum3	74	52.941	ENSPPAG00000041337	PUM3	61	52.963	Pan_paniscus
ENSCVAG00000006550	pum3	74	52.399	ENSPPRG00000000809	PUM3	61	51.673	Panthera_pardus
ENSCVAG00000006550	pum3	74	53.137	ENSPTIG00000021934	PUM3	61	52.416	Panthera_tigris_altaica
ENSCVAG00000006550	pum3	74	53.309	ENSPTRG00000020735	PUM3	61	53.333	Pan_troglodytes
ENSCVAG00000006550	pum3	74	52.941	ENSPANG00000025118	PUM3	61	52.963	Papio_anubis
ENSCVAG00000006550	pum3	100	57.196	ENSPKIG00000022249	pum3	72	52.941	Paramormyrops_kingsleyae
ENSCVAG00000006550	pum3	99	54.647	ENSPSIG00000016272	PUM3	52	54.647	Pelodiscus_sinensis
ENSCVAG00000006550	pum3	61	57.091	ENSPMGG00000021261	pum3	53	58.824	Periophthalmus_magnuspinnatus
ENSCVAG00000006550	pum3	72	63.158	ENSPEMG00000019340	-	50	58.696	Peromyscus_maniculatus_bairdii
ENSCVAG00000006550	pum3	100	71.329	ENSPFOG00000001719	pum3	68	71.329	Poecilia_formosa
ENSCVAG00000006550	pum3	100	71.678	ENSPLAG00000020010	pum3	71	71.678	Poecilia_latipinna
ENSCVAG00000006550	pum3	100	75.093	ENSPMEG00000017451	pum3	100	75.093	Poecilia_mexicana
ENSCVAG00000006550	pum3	60	67.500	ENSPREG00000019478	-	57	77.778	Poecilia_reticulata
ENSCVAG00000006550	pum3	74	53.676	ENSPPYG00000019255	PUM3	61	53.704	Pongo_abelii
ENSCVAG00000006550	pum3	98	52.593	ENSPCAG00000005797	PUM3	59	51.866	Procavia_capensis
ENSCVAG00000006550	pum3	98	53.309	ENSPCOG00000027325	PUM3	51	52.593	Propithecus_coquereli
ENSCVAG00000006550	pum3	100	73.897	ENSPNYG00000016124	pum3	77	73.897	Pundamilia_nyererei
ENSCVAG00000006550	pum3	99	55.282	ENSPNAG00000026524	pum3	78	55.282	Pygocentrus_nattereri
ENSCVAG00000006550	pum3	95	51.111	ENSRNOG00000048356	RGD1308750	62	51.111	Rattus_norvegicus
ENSCVAG00000006550	pum3	95	51.852	ENSRNOG00000012574	Pum3	62	51.852	Rattus_norvegicus
ENSCVAG00000006550	pum3	92	52.206	ENSRBIG00000036924	PUM3	61	51.852	Rhinopithecus_bieti
ENSCVAG00000006550	pum3	92	52.574	ENSRROG00000041089	PUM3	61	52.593	Rhinopithecus_roxellana
ENSCVAG00000006550	pum3	74	52.941	ENSSBOG00000028066	PUM3	61	52.963	Saimiri_boliviensis_boliviensis
ENSCVAG00000006550	pum3	99	50.000	ENSSHAG00000003730	PUM3	71	50.000	Sarcophilus_harrisii
ENSCVAG00000006550	pum3	99	58.582	ENSSFOG00015018778	pum3	70	58.582	Scleropages_formosus
ENSCVAG00000006550	pum3	100	68.531	ENSSMAG00000013236	pum3	71	68.531	Scophthalmus_maximus
ENSCVAG00000006550	pum3	99	72.325	ENSSDUG00000001887	pum3	70	69.580	Seriola_dumerili
ENSCVAG00000006550	pum3	100	69.580	ENSSLDG00000015766	pum3	70	69.580	Seriola_lalandi_dorsalis
ENSCVAG00000006550	pum3	74	52.222	ENSSARG00000000579	PUM3	64	52.222	Sorex_araneus
ENSCVAG00000006550	pum3	92	51.103	ENSSPUG00000001707	PUM3	51	51.103	Sphenodon_punctatus
ENSCVAG00000006550	pum3	99	73.432	ENSSPAG00000003976	pum3	69	73.162	Stegastes_partitus
ENSCVAG00000006550	pum3	94	52.593	ENSSSCG00000005227	PUM3	60	52.788	Sus_scrofa
ENSCVAG00000006550	pum3	95	52.416	ENSTGUG00000005339	PUM3	53	52.416	Taeniopygia_guttata
ENSCVAG00000006550	pum3	100	71.329	ENSTRUG00000004074	pum3	70	71.329	Takifugu_rubripes
ENSCVAG00000006550	pum3	99	70.423	ENSTNIG00000010325	pum3	76	70.070	Tetraodon_nigroviridis
ENSCVAG00000006550	pum3	74	44.444	ENSTBEG00000013058	PUM3	51	43.750	Tupaia_belangeri
ENSCVAG00000006550	pum3	92	52.222	ENSTTRG00000001062	PUM3	57	52.222	Tursiops_truncatus
ENSCVAG00000006550	pum3	75	53.160	ENSUMAG00000018443	PUM3	67	53.160	Ursus_maritimus
ENSCVAG00000006550	pum3	98	52.593	ENSVPAG00000010766	PUM3	51	52.788	Vicugna_pacos
ENSCVAG00000006550	pum3	74	52.045	ENSVVUG00000006527	PUM3	73	52.045	Vulpes_vulpes
ENSCVAG00000006550	pum3	61	35.793	ENSXETG00000011707	pum3	63	35.793	Xenopus_tropicalis
ENSCVAG00000006550	pum3	88	81.166	ENSXCOG00000006725	pum3	60	81.166	Xiphophorus_couchianus
ENSCVAG00000006550	pum3	100	70.280	ENSXMAG00000002926	pum3	71	70.280	Xiphophorus_maculatus