EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000006564 (Gene tree)
Gene ID: 107096782
Gene Symbol: -
Alias: -
Full Name: stress-induced-phosphoprotein 1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 14164 bases
Position: chrKL653150.1:33857-48020
Accession: 107096782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000005216	RRM_1	PF00076.22	8.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007056	-	5387	XM_015393589	ENSCVAP00000005216	636 (aa)	XP_015249075	UPI00074260C0

Gene Model

Click here to download ENSCVAG00000006564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006564's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000006564	-	60	37.805	ENSCVAG00000004187	-	53	41.071
ENSCVAG00000006564	-	61	32.057	ENSCVAG00000013288	zgc:123010	65	32.570

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006564	-	58	32.570	ENSAPOG00000019633	zgc:123010	65	32.570	Acanthochromis_polyacanthus
ENSCVAG00000006564	-	100	57.121	ENSAPOG00000005058	si:dkey-33c12.4	100	56.672	Acanthochromis_polyacanthus
ENSCVAG00000006564	-	53	32.578	ENSACIG00000021684	zgc:123010	84	31.008	Amphilophus_citrinellus
ENSCVAG00000006564	-	58	32.570	ENSAOCG00000005910	zgc:123010	65	32.570	Amphiprion_ocellaris
ENSCVAG00000006564	-	98	57.757	ENSAOCG00000020066	si:dkey-33c12.4	97	57.887	Amphiprion_ocellaris
ENSCVAG00000006564	-	58	32.316	ENSAPEG00000014305	zgc:123010	69	32.316	Amphiprion_percula
ENSCVAG00000006564	-	54	30.728	ENSATEG00000022160	-	62	30.458	Anabas_testudineus
ENSCVAG00000006564	-	99	55.573	ENSATEG00000018885	si:dkey-33c12.4	99	54.587	Anabas_testudineus
ENSCVAG00000006564	-	54	34.444	ENSATEG00000001220	zgc:123010	59	34.722	Anabas_testudineus
ENSCVAG00000006564	-	100	54.260	ENSACLG00000014192	si:dkey-33c12.4	100	55.487	Astatotilapia_calliptera
ENSCVAG00000006564	-	58	31.552	ENSACLG00000010188	zgc:123010	66	31.552	Astatotilapia_calliptera
ENSCVAG00000006564	-	96	38.462	ENSAMXG00000010871	si:dkey-33c12.4	70	39.831	Astyanax_mexicanus
ENSCVAG00000006564	-	58	34.555	ENSAMXG00000041967	zgc:123010	61	34.555	Astyanax_mexicanus
ENSCVAG00000006564	-	53	36.975	ENSCPBG00000024454	-	50	36.769	Chrysemys_picta_bellii
ENSCVAG00000006564	-	96	36.672	ENSDARG00000057890	si:dkey-33c12.4	98	36.055	Danio_rerio
ENSCVAG00000006564	-	58	32.134	ENSDARG00000039082	zgc:123010	69	32.391	Danio_rerio
ENSCVAG00000006564	-	82	35.283	ENSELUG00000001633	-	57	38.786	Esox_lucius
ENSCVAG00000006564	-	95	37.048	ENSELUG00000002009	si:dkey-33c12.4	89	45.266	Esox_lucius
ENSCVAG00000006564	-	53	34.540	ENSELUG00000022008	zgc:123010	72	46.667	Esox_lucius
ENSCVAG00000006564	-	61	30.622	ENSFHEG00000002306	zgc:123010	82	33.824	Fundulus_heteroclitus
ENSCVAG00000006564	-	100	71.077	ENSFHEG00000005521	si:dkey-33c12.4	100	71.451	Fundulus_heteroclitus
ENSCVAG00000006564	-	99	67.378	ENSGAFG00000017596	si:dkey-33c12.4	100	66.159	Gambusia_affinis
ENSCVAG00000006564	-	56	31.830	ENSGACG00000007620	zgc:123010	86	32.011	Gasterosteus_aculeatus
ENSCVAG00000006564	-	57	56.403	ENSGACG00000004936	-	97	56.712	Gasterosteus_aculeatus
ENSCVAG00000006564	-	100	54.940	ENSHBUG00000010735	si:dkey-33c12.4	100	56.587	Haplochromis_burtoni
ENSCVAG00000006564	-	96	39.043	ENSIPUG00000005998	si:dkey-33c12.4	57	44.855	Ictalurus_punctatus
ENSCVAG00000006564	-	100	60.308	ENSKMAG00000016610	si:dkey-33c12.4	100	59.754	Kryptolebias_marmoratus
ENSCVAG00000006564	-	99	51.783	ENSLBEG00000021088	-	99	54.294	Labrus_bergylta
ENSCVAG00000006564	-	53	38.814	ENSLBEG00000028046	-	56	39.071	Labrus_bergylta
ENSCVAG00000006564	-	91	50.250	ENSLBEG00000017203	-	99	53.234	Labrus_bergylta
ENSCVAG00000006564	-	68	31.102	ENSLBEG00000023984	zgc:123010	59	34.262	Labrus_bergylta
ENSCVAG00000006564	-	87	30.221	ENSLACG00000004602	-	60	35.227	Latimeria_chalumnae
ENSCVAG00000006564	-	58	42.746	ENSLOCG00000001861	-	57	42.746	Lepisosteus_oculatus
ENSCVAG00000006564	-	51	31.707	ENSMAMG00000002460	-	70	42.254	Mastacembelus_armatus
ENSCVAG00000006564	-	67	30.330	ENSMAMG00000001145	zgc:123010	80	31.865	Mastacembelus_armatus
ENSCVAG00000006564	-	74	34.756	ENSMAMG00000004311	-	59	39.167	Mastacembelus_armatus
ENSCVAG00000006564	-	99	53.775	ENSMAMG00000000111	si:dkey-33c12.4	99	56.836	Mastacembelus_armatus
ENSCVAG00000006564	-	59	38.619	ENSMZEG00005000585	-	52	43.396	Maylandia_zebra
ENSCVAG00000006564	-	58	31.552	ENSMZEG00005027733	zgc:123010	66	31.552	Maylandia_zebra
ENSCVAG00000006564	-	100	54.410	ENSMZEG00005014276	si:dkey-33c12.4	100	56.502	Maylandia_zebra
ENSCVAG00000006564	-	52	30.857	ENSMMOG00000010544	zgc:123010	64	31.429	Mola_mola
ENSCVAG00000006564	-	53	33.705	ENSMALG00000017698	zgc:123010	59	33.983	Monopterus_albus
ENSCVAG00000006564	-	99	55.624	ENSMALG00000002265	si:dkey-33c12.4	99	56.240	Monopterus_albus
ENSCVAG00000006564	-	56	59.116	ENSONIG00000012263	-	98	58.904	Oreochromis_niloticus
ENSCVAG00000006564	-	58	30.025	ENSONIG00000018353	zgc:123010	69	30.025	Oreochromis_niloticus
ENSCVAG00000006564	-	98	49.525	ENSORLG00000029651	si:dkey-33c12.4	99	50.932	Oryzias_latipes
ENSCVAG00000006564	-	98	47.727	ENSORLG00020008750	si:dkey-33c12.4	99	48.882	Oryzias_latipes_hni
ENSCVAG00000006564	-	82	30.127	ENSORLG00015008373	zgc:123010	63	32.979	Oryzias_latipes_hsok
ENSCVAG00000006564	-	98	49.849	ENSOMEG00000008913	-	57	61.170	Oryzias_melastigma
ENSCVAG00000006564	-	83	38.632	ENSPKIG00000011819	-	78	37.708	Paramormyrops_kingsleyae
ENSCVAG00000006564	-	57	31.316	ENSPKIG00000015521	zgc:123010	71	31.316	Paramormyrops_kingsleyae
ENSCVAG00000006564	-	51	40.594	ENSPMGG00000020251	zgc:123010	72	40.594	Periophthalmus_magnuspinnatus
ENSCVAG00000006564	-	51	30.060	ENSPMAG00000004544	zgc:123010	98	30.060	Petromyzon_marinus
ENSCVAG00000006564	-	71	30.435	ENSPFOG00000001073	zgc:123010	84	30.505	Poecilia_formosa
ENSCVAG00000006564	-	99	66.566	ENSPFOG00000009143	si:dkey-33c12.4	100	66.415	Poecilia_formosa
ENSCVAG00000006564	-	68	30.702	ENSPLAG00000007711	zgc:123010	84	30.505	Poecilia_latipinna
ENSCVAG00000006564	-	96	66.771	ENSPLAG00000022537	si:dkey-33c12.4	100	66.614	Poecilia_latipinna
ENSCVAG00000006564	-	71	30.435	ENSPMEG00000005092	zgc:123010	84	30.505	Poecilia_mexicana
ENSCVAG00000006564	-	99	66.112	ENSPMEG00000015590	si:dkey-33c12.4	100	65.961	Poecilia_mexicana
ENSCVAG00000006564	-	55	34.872	ENSPREG00000019587	zgc:123010	67	44.030	Poecilia_reticulata
ENSCVAG00000006564	-	100	54.559	ENSPNYG00000018262	si:dkey-33c12.4	100	56.652	Pundamilia_nyererei
ENSCVAG00000006564	-	59	38.875	ENSPNYG00000001047	-	53	43.438	Pundamilia_nyererei
ENSCVAG00000006564	-	58	31.298	ENSPNYG00000007893	zgc:123010	66	31.298	Pundamilia_nyererei
ENSCVAG00000006564	-	65	41.038	ENSPNAG00000018386	si:dkey-33c12.4	52	46.132	Pygocentrus_nattereri
ENSCVAG00000006564	-	56	34.409	ENSPNAG00000007579	zgc:123010	62	33.065	Pygocentrus_nattereri
ENSCVAG00000006564	-	56	31.316	ENSSFOG00015021394	zgc:123010	66	31.316	Scleropages_formosus
ENSCVAG00000006564	-	54	42.735	ENSSFOG00015005186	-	54	42.735	Scleropages_formosus
ENSCVAG00000006564	-	71	38.689	ENSSFOG00015009199	-	56	43.360	Scleropages_formosus
ENSCVAG00000006564	-	53	34.181	ENSSMAG00000002904	zgc:123010	65	32.061	Scophthalmus_maximus
ENSCVAG00000006564	-	99	54.367	ENSSMAG00000008147	si:dkey-33c12.4	99	53.765	Scophthalmus_maximus
ENSCVAG00000006564	-	53	34.540	ENSSDUG00000008651	zgc:123010	58	33.983	Seriola_dumerili
ENSCVAG00000006564	-	60	39.231	ENSSDUG00000010976	-	51	43.849	Seriola_dumerili
ENSCVAG00000006564	-	99	59.077	ENSSDUG00000003213	si:dkey-33c12.4	99	58.769	Seriola_dumerili
ENSCVAG00000006564	-	99	58.769	ENSSLDG00000009448	si:dkey-33c12.4	99	58.769	Seriola_lalandi_dorsalis
ENSCVAG00000006564	-	60	39.231	ENSSLDG00000012846	-	53	43.849	Seriola_lalandi_dorsalis
ENSCVAG00000006564	-	53	34.540	ENSSLDG00000019386	zgc:123010	61	33.983	Seriola_lalandi_dorsalis
ENSCVAG00000006564	-	58	33.333	ENSSPAG00000013621	zgc:123010	65	33.333	Stegastes_partitus
ENSCVAG00000006564	-	100	55.988	ENSSPAG00000022577	-	100	58.806	Stegastes_partitus
ENSCVAG00000006564	-	99	43.887	ENSTRUG00000022374	si:dkey-33c12.4	90	45.055	Takifugu_rubripes
ENSCVAG00000006564	-	54	53.216	ENSTNIG00000010542	-	98	51.913	Tetraodon_nigroviridis
ENSCVAG00000006564	-	53	31.728	ENSTNIG00000001303	zgc:123010	90	31.728	Tetraodon_nigroviridis
ENSCVAG00000006564	-	61	31.643	ENSXCOG00000012281	zgc:123010	72	33.989	Xiphophorus_couchianus
ENSCVAG00000006564	-	71	30.435	ENSXMAG00000002598	zgc:123010	83	30.849	Xiphophorus_maculatus
ENSCVAG00000006564	-	99	67.890	ENSXMAG00000018535	si:dkey-33c12.4	100	66.820	Xiphophorus_maculatus