EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000006586 (Gene tree)
Gene ID: 107090037
Gene Symbol: sharpin
Alias: sipl1
Full Name: SHANK associated RH domain interactor
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 11295 bases
Position: chrKL652777.1:619990-631284
Accession: 107090037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000023328	zf-RanBP	PF00641.18	6.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007021	-	4783	XM_015383189	ENSCVAP00000023328	435 (aa)	XP_015238675	UPI0007427F1D

Gene Model

Click here to download ENSCVAG00000006586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006586's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000006586	sharpin	95	54.953	ENSCVAG00000007250	shrprbck1r	59	54.953

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006586	sharpin	99	53.632	ENSAPOG00000022737	shrprbck1r	65	53.632	Acanthochromis_polyacanthus
ENSCVAG00000006586	sharpin	100	82.838	ENSAPOG00000023352	sharpin	100	82.838	Acanthochromis_polyacanthus
ENSCVAG00000006586	sharpin	95	55.684	ENSACIG00000002184	shrprbck1r	97	51.064	Amphilophus_citrinellus
ENSCVAG00000006586	sharpin	100	83.295	ENSAOCG00000017464	sharpin	100	83.295	Amphiprion_ocellaris
ENSCVAG00000006586	sharpin	99	53.118	ENSAOCG00000002890	shrprbck1r	65	53.118	Amphiprion_ocellaris
ENSCVAG00000006586	sharpin	100	83.295	ENSAPEG00000004049	sharpin	100	83.295	Amphiprion_percula
ENSCVAG00000006586	sharpin	99	52.128	ENSAPEG00000023274	shrprbck1r	64	52.128	Amphiprion_percula
ENSCVAG00000006586	sharpin	95	54.273	ENSATEG00000014561	shrprbck1r	59	54.273	Anabas_testudineus
ENSCVAG00000006586	sharpin	96	80.476	ENSATEG00000007832	sharpin	88	80.476	Anabas_testudineus
ENSCVAG00000006586	sharpin	95	54.907	ENSACLG00000022609	shrprbck1r	59	55.607	Astatotilapia_calliptera
ENSCVAG00000006586	sharpin	62	87.879	ENSACLG00000020160	-	85	87.879	Astatotilapia_calliptera
ENSCVAG00000006586	sharpin	95	56.823	ENSAMXG00000021016	shrprbck1r	66	57.047	Astyanax_mexicanus
ENSCVAG00000006586	sharpin	87	53.197	ENSAMXG00000006229	sharpin	96	53.197	Astyanax_mexicanus
ENSCVAG00000006586	sharpin	95	49.302	ENSCSEG00000011306	shrprbck1r	59	50.930	Cynoglossus_semilaevis
ENSCVAG00000006586	sharpin	91	53.827	ENSDARG00000076995	sharpin	98	53.827	Danio_rerio
ENSCVAG00000006586	sharpin	99	53.797	ENSDARG00000059871	shrprbck1r	97	53.895	Danio_rerio
ENSCVAG00000006586	sharpin	99	54.741	ENSELUG00000016022	shrprbck1r	64	54.741	Esox_lucius
ENSCVAG00000006586	sharpin	100	92.644	ENSFHEG00000013564	sharpin	99	92.644	Fundulus_heteroclitus
ENSCVAG00000006586	sharpin	84	75.926	ENSGMOG00000010123	sharpin	95	75.926	Gadus_morhua
ENSCVAG00000006586	sharpin	95	53.653	ENSGAFG00000009309	shrprbck1r	59	53.653	Gambusia_affinis
ENSCVAG00000006586	sharpin	96	64.439	ENSGAFG00000021405	sharpin	97	64.439	Gambusia_affinis
ENSCVAG00000006586	sharpin	95	55.607	ENSHBUG00000021933	shrprbck1r	59	55.607	Haplochromis_burtoni
ENSCVAG00000006586	sharpin	96	66.903	ENSHCOG00000018847	sharpin	81	67.217	Hippocampus_comes
ENSCVAG00000006586	sharpin	89	56.709	ENSIPUG00000014247	shrprbck1r	55	56.709	Ictalurus_punctatus
ENSCVAG00000006586	sharpin	87	54.242	ENSIPUG00000011951	sharpin	99	54.242	Ictalurus_punctatus
ENSCVAG00000006586	sharpin	96	77.546	ENSKMAG00000015204	sharpin	77	77.546	Kryptolebias_marmoratus
ENSCVAG00000006586	sharpin	95	53.075	ENSKMAG00000015215	shrprbck1r	60	53.075	Kryptolebias_marmoratus
ENSCVAG00000006586	sharpin	99	52.463	ENSLBEG00000016876	shrprbck1r	65	52.891	Labrus_bergylta
ENSCVAG00000006586	sharpin	100	80.549	ENSLBEG00000016624	sharpin	99	80.549	Labrus_bergylta
ENSCVAG00000006586	sharpin	90	45.320	ENSLACG00000010948	-	58	45.320	Latimeria_chalumnae
ENSCVAG00000006586	sharpin	94	59.857	ENSLOCG00000008910	shrprbck1r	59	60.095	Lepisosteus_oculatus
ENSCVAG00000006586	sharpin	99	51.368	ENSMAMG00000022930	shrprbck1r	65	51.566	Mastacembelus_armatus
ENSCVAG00000006586	sharpin	75	61.818	ENSMAMG00000014645	sharpin	85	61.818	Mastacembelus_armatus
ENSCVAG00000006586	sharpin	95	54.673	ENSMZEG00005021257	shrprbck1r	59	55.374	Maylandia_zebra
ENSCVAG00000006586	sharpin	77	84.091	ENSMMOG00000016788	sharpin	92	84.091	Mola_mola
ENSCVAG00000006586	sharpin	95	53.547	ENSMMOG00000003764	shrprbck1r	59	53.363	Mola_mola
ENSCVAG00000006586	sharpin	88	56.927	ENSMALG00000008861	shrprbck1r	55	56.927	Monopterus_albus
ENSCVAG00000006586	sharpin	59	96.296	ENSMALG00000020528	sharpin	70	96.296	Monopterus_albus
ENSCVAG00000006586	sharpin	95	54.524	ENSNBRG00000002270	shrprbck1r	59	55.220	Neolamprologus_brichardi
ENSCVAG00000006586	sharpin	76	60.121	ENSNBRG00000012382	sharpin	94	60.121	Neolamprologus_brichardi
ENSCVAG00000006586	sharpin	95	54.988	ENSONIG00000014401	shrprbck1r	59	55.684	Oreochromis_niloticus
ENSCVAG00000006586	sharpin	90	69.268	ENSONIG00000009626	-	99	69.268	Oreochromis_niloticus
ENSCVAG00000006586	sharpin	100	76.888	ENSORLG00000017281	sharpin	100	76.888	Oryzias_latipes
ENSCVAG00000006586	sharpin	95	55.275	ENSORLG00000007392	shrprbck1r	59	55.275	Oryzias_latipes
ENSCVAG00000006586	sharpin	95	55.046	ENSORLG00020018619	shrprbck1r	59	55.046	Oryzias_latipes_hni
ENSCVAG00000006586	sharpin	100	77.294	ENSORLG00020000801	sharpin	100	77.294	Oryzias_latipes_hni
ENSCVAG00000006586	sharpin	100	77.523	ENSORLG00015009860	sharpin	100	77.523	Oryzias_latipes_hsok
ENSCVAG00000006586	sharpin	95	54.503	ENSORLG00015018865	shrprbck1r	59	54.503	Oryzias_latipes_hsok
ENSCVAG00000006586	sharpin	95	55.164	ENSOMEG00000012749	shrprbck1r	59	55.164	Oryzias_melastigma
ENSCVAG00000006586	sharpin	97	56.635	ENSOMEG00000005729	sharpin	91	56.635	Oryzias_melastigma
ENSCVAG00000006586	sharpin	98	58.469	ENSPKIG00000018308	-	90	58.469	Paramormyrops_kingsleyae
ENSCVAG00000006586	sharpin	94	61.611	ENSPKIG00000006933	shrprbck1r	59	62.411	Paramormyrops_kingsleyae
ENSCVAG00000006586	sharpin	51	84.892	ENSPMGG00000019318	sharpin	95	78.409	Periophthalmus_magnuspinnatus
ENSCVAG00000006586	sharpin	99	51.648	ENSPMGG00000013254	shrprbck1r	64	51.648	Periophthalmus_magnuspinnatus
ENSCVAG00000006586	sharpin	99	51.386	ENSPFOG00000004214	shrprbck1r	97	51.386	Poecilia_formosa
ENSCVAG00000006586	sharpin	100	92.644	ENSPFOG00000015253	sharpin	100	92.644	Poecilia_formosa
ENSCVAG00000006586	sharpin	100	92.874	ENSPLAG00000000423	sharpin	100	92.874	Poecilia_latipinna
ENSCVAG00000006586	sharpin	95	53.953	ENSPLAG00000020523	shrprbck1r	59	53.953	Poecilia_latipinna
ENSCVAG00000006586	sharpin	95	54.253	ENSPMEG00000006877	shrprbck1r	59	54.253	Poecilia_mexicana
ENSCVAG00000006586	sharpin	81	82.883	ENSPMEG00000023030	sharpin	91	82.883	Poecilia_mexicana
ENSCVAG00000006586	sharpin	100	92.431	ENSPREG00000009702	sharpin	100	92.431	Poecilia_reticulata
ENSCVAG00000006586	sharpin	95	53.972	ENSPREG00000014689	shrprbck1r	59	53.972	Poecilia_reticulata
ENSCVAG00000006586	sharpin	95	54.673	ENSPNYG00000022601	shrprbck1r	59	55.374	Pundamilia_nyererei
ENSCVAG00000006586	sharpin	87	51.157	ENSPNAG00000002911	sharpin	99	51.671	Pygocentrus_nattereri
ENSCVAG00000006586	sharpin	95	56.236	ENSPNAG00000007847	shrprbck1r	60	56.916	Pygocentrus_nattereri
ENSCVAG00000006586	sharpin	95	52.079	ENSSFOG00015004028	sharpin	93	53.173	Scleropages_formosus
ENSCVAG00000006586	sharpin	95	53.653	ENSSMAG00000018085	shrprbck1r	60	54.110	Scophthalmus_maximus
ENSCVAG00000006586	sharpin	99	52.311	ENSSDUG00000002959	shrprbck1r	65	53.571	Seriola_dumerili
ENSCVAG00000006586	sharpin	95	61.017	ENSSDUG00000019039	sharpin	95	61.017	Seriola_dumerili
ENSCVAG00000006586	sharpin	99	51.891	ENSSLDG00000009026	shrprbck1r	65	53.151	Seriola_lalandi_dorsalis
ENSCVAG00000006586	sharpin	62	91.667	ENSSPAG00000021807	sharpin	92	91.667	Stegastes_partitus
ENSCVAG00000006586	sharpin	99	51.789	ENSSPAG00000016097	shrprbck1r	66	51.789	Stegastes_partitus
ENSCVAG00000006586	sharpin	95	53.037	ENSTRUG00000006949	shrprbck1r	58	53.271	Takifugu_rubripes
ENSCVAG00000006586	sharpin	95	65.301	ENSTRUG00000011046	sharpin	96	64.775	Takifugu_rubripes
ENSCVAG00000006586	sharpin	91	67.822	ENSTNIG00000008521	sharpin	98	67.822	Tetraodon_nigroviridis
ENSCVAG00000006586	sharpin	95	50.913	ENSXCOG00000006701	shrprbck1r	58	50.913	Xiphophorus_couchianus
ENSCVAG00000006586	sharpin	96	62.945	ENSXCOG00000015019	sharpin	98	62.945	Xiphophorus_couchianus
ENSCVAG00000006586	sharpin	95	51.142	ENSXMAG00000018972	shrprbck1r	58	51.142	Xiphophorus_maculatus
ENSCVAG00000006586	sharpin	100	92.431	ENSXMAG00000022076	sharpin	100	92.431	Xiphophorus_maculatus