EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000006635 (Gene tree)
Gene ID: 107086087
Gene Symbol: ddx55
Alias: chunp6861|fc32a12|kiaa1595|wu:fc32a12
Full Name: DEAD-box helicase 55
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 9118 bases
Position: chrKL652642.1:653781-662898
Accession: 107086087
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000023324	ResIII	PF04851.15	2e-06	1	1
ENSCVAP00000005252	ResIII	PF04851.15	2.6e-06	1	1
ENSCVAP00000023324	DEAD	PF00270.29	1.1e-40	1	1
ENSCVAP00000005252	DEAD	PF00270.29	1.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000006999	-	3284	XM_015376840	ENSCVAP00000005252	592 (aa)	XP_015232326	UPI000742BAD9
ENSCVAT00000007017	-	1686	-	ENSCVAP00000023324	561 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000006635's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006635's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000006635	ddx55	58	30.460	ENSCVAG00000012835	ddx59	52	30.058
ENSCVAG00000006635	ddx55	61	32.905	ENSCVAG00000001784	-	57	32.474
ENSCVAG00000006635	ddx55	62	30.518	ENSCVAG00000006864	eif4a3	84	30.518
ENSCVAG00000006635	ddx55	60	30.663	ENSCVAG00000009980	ddx43	50	30.110
ENSCVAG00000006635	ddx55	51	30.864	ENSCVAG00000005890	ddx24	57	30.864
ENSCVAG00000006635	ddx55	60	30.137	ENSCVAG00000018093	ddx5	69	30.278
ENSCVAG00000006635	ddx55	66	31.017	ENSCVAG00000010466	ddx49	79	30.673
ENSCVAG00000006635	ddx55	61	33.247	ENSCVAG00000011003	-	52	32.494
ENSCVAG00000006635	ddx55	61	32.514	ENSCVAG00000010921	si:dkey-156n14.5	54	32.787
ENSCVAG00000006635	ddx55	76	30.392	ENSCVAG00000000189	ddx31	82	30.392
ENSCVAG00000006635	ddx55	66	30.334	ENSCVAG00000002540	ddx6	58	32.472
ENSCVAG00000006635	ddx55	84	35.412	ENSCVAG00000000109	ddx10	56	37.277
ENSCVAG00000006635	ddx55	76	36.638	ENSCVAG00000017936	ddx18	68	36.443
ENSCVAG00000006635	ddx55	56	31.395	ENSCVAG00000014462	DDX41	56	31.395
ENSCVAG00000006635	ddx55	61	30.964	ENSCVAG00000015745	ddx23	50	30.457

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006635	ddx55	98	74.138	ENSG00000111364	DDX55	96	74.317	Homo_sapiens
ENSCVAG00000006635	ddx55	99	86.271	ENSAPOG00000013126	ddx55	99	86.271	Acanthochromis_polyacanthus
ENSCVAG00000006635	ddx55	98	71.675	ENSAMEG00000015274	DDX55	96	71.675	Ailuropoda_melanoleuca
ENSCVAG00000006635	ddx55	99	86.802	ENSACIG00000007580	ddx55	99	86.802	Amphilophus_citrinellus
ENSCVAG00000006635	ddx55	99	86.757	ENSAOCG00000012037	ddx55	93	86.905	Amphiprion_ocellaris
ENSCVAG00000006635	ddx55	99	86.587	ENSAPEG00000011003	ddx55	93	86.587	Amphiprion_percula
ENSCVAG00000006635	ddx55	99	84.211	ENSATEG00000004029	ddx55	98	84.211	Anabas_testudineus
ENSCVAG00000006635	ddx55	94	70.557	ENSAPLG00000015032	DDX55	98	70.557	Anas_platyrhynchos
ENSCVAG00000006635	ddx55	99	72.496	ENSACAG00000015296	DDX55	98	72.496	Anolis_carolinensis
ENSCVAG00000006635	ddx55	88	72.131	ENSANAG00000034064	DDX55	96	72.131	Aotus_nancymaae
ENSCVAG00000006635	ddx55	100	86.993	ENSACLG00000024691	ddx55	100	86.993	Astatotilapia_calliptera
ENSCVAG00000006635	ddx55	100	75.401	ENSAMXG00000019947	ddx55	98	75.401	Astyanax_mexicanus
ENSCVAG00000006635	ddx55	98	73.621	ENSBTAG00000007266	DDX55	96	69.655	Bos_taurus
ENSCVAG00000006635	ddx55	92	37.699	WBGene00013983	ZK512.2	96	37.573	Caenorhabditis_elegans
ENSCVAG00000006635	ddx55	98	73.276	ENSCJAG00000020471	-	96	73.276	Callithrix_jacchus
ENSCVAG00000006635	ddx55	98	72.884	ENSCAFG00000007452	DDX55	96	72.884	Canis_familiaris
ENSCVAG00000006635	ddx55	94	72.744	ENSCAFG00020015254	DDX55	94	74.187	Canis_lupus_dingo
ENSCVAG00000006635	ddx55	98	73.621	ENSCHIG00000020402	DDX55	96	73.621	Capra_hircus
ENSCVAG00000006635	ddx55	98	72.586	ENSTSYG00000007427	DDX55	96	72.586	Carlito_syrichta
ENSCVAG00000006635	ddx55	96	72.487	ENSCAPG00000005124	DDX55	96	72.824	Cavia_aperea
ENSCVAG00000006635	ddx55	100	72.175	ENSCPOG00000010015	DDX55	99	72.175	Cavia_porcellus
ENSCVAG00000006635	ddx55	98	73.621	ENSCCAG00000021652	DDX55	96	73.621	Cebus_capucinus
ENSCVAG00000006635	ddx55	98	69.712	ENSCATG00000034315	DDX55	96	69.712	Cercocebus_atys
ENSCVAG00000006635	ddx55	98	73.057	ENSCLAG00000011203	DDX55	96	73.057	Chinchilla_lanigera
ENSCVAG00000006635	ddx55	98	73.448	ENSCSAG00000002057	DDX55	96	73.448	Chlorocebus_sabaeus
ENSCVAG00000006635	ddx55	88	75.717	ENSCPBG00000025960	DDX55	96	75.717	Chrysemys_picta_bellii
ENSCVAG00000006635	ddx55	97	53.571	ENSCING00000009622	-	98	52.891	Ciona_intestinalis
ENSCVAG00000006635	ddx55	97	53.621	ENSCSAVG00000003375	-	97	53.448	Ciona_savignyi
ENSCVAG00000006635	ddx55	98	73.448	ENSCANG00000000156	DDX55	96	73.448	Colobus_angolensis_palliatus
ENSCVAG00000006635	ddx55	99	73.379	ENSCGRG00001001652	Ddx55	97	73.379	Cricetulus_griseus_chok1gshd
ENSCVAG00000006635	ddx55	99	73.208	ENSCGRG00000014742	Ddx55	97	73.208	Cricetulus_griseus_crigri
ENSCVAG00000006635	ddx55	98	83.276	ENSCSEG00000012161	ddx55	97	83.276	Cynoglossus_semilaevis
ENSCVAG00000006635	ddx55	99	79.557	ENSDARG00000009864	ddx55	98	79.557	Danio_rerio
ENSCVAG00000006635	ddx55	99	72.232	ENSDNOG00000005167	DDX55	97	72.232	Dasypus_novemcinctus
ENSCVAG00000006635	ddx55	97	46.266	FBgn0037561	CG9630	98	46.129	Drosophila_melanogaster
ENSCVAG00000006635	ddx55	94	60.901	ENSETEG00000001826	DDX55	96	61.949	Echinops_telfairi
ENSCVAG00000006635	ddx55	98	60.434	ENSEBUG00000007071	ddx55	100	61.101	Eptatretus_burgeri
ENSCVAG00000006635	ddx55	99	72.014	ENSEASG00005012650	DDX55	100	74.044	Equus_asinus_asinus
ENSCVAG00000006635	ddx55	88	73.423	ENSECAG00000011237	DDX55	84	73.423	Equus_caballus
ENSCVAG00000006635	ddx55	98	63.385	ENSEEUG00000006313	DDX55	96	63.385	Erinaceus_europaeus
ENSCVAG00000006635	ddx55	100	79.461	ENSELUG00000002616	ddx55	98	79.461	Esox_lucius
ENSCVAG00000006635	ddx55	98	72.712	ENSFCAG00000003770	DDX55	96	72.712	Felis_catus
ENSCVAG00000006635	ddx55	99	72.326	ENSFALG00000009300	DDX55	98	72.449	Ficedula_albicollis
ENSCVAG00000006635	ddx55	99	71.791	ENSFDAG00000004680	DDX55	98	71.791	Fukomys_damarensis
ENSCVAG00000006635	ddx55	99	89.966	ENSFHEG00000007912	ddx55	99	89.966	Fundulus_heteroclitus
ENSCVAG00000006635	ddx55	99	74.787	ENSGMOG00000017762	ddx55	97	74.957	Gadus_morhua
ENSCVAG00000006635	ddx55	99	71.817	ENSGALG00000003298	DDX55	99	71.817	Gallus_gallus
ENSCVAG00000006635	ddx55	100	90.709	ENSGAFG00000004388	ddx55	100	90.709	Gambusia_affinis
ENSCVAG00000006635	ddx55	99	82.253	ENSGACG00000015591	ddx55	96	81.726	Gasterosteus_aculeatus
ENSCVAG00000006635	ddx55	92	76.287	ENSGAGG00000014403	DDX55	96	76.908	Gopherus_agassizii
ENSCVAG00000006635	ddx55	98	73.966	ENSGGOG00000026102	DDX55	96	73.966	Gorilla_gorilla
ENSCVAG00000006635	ddx55	100	86.993	ENSHBUG00000011523	ddx55	100	86.993	Haplochromis_burtoni
ENSCVAG00000006635	ddx55	98	72.241	ENSHGLG00000019202	DDX55	96	72.241	Heterocephalus_glaber_female
ENSCVAG00000006635	ddx55	98	72.241	ENSHGLG00100019440	DDX55	96	72.241	Heterocephalus_glaber_male
ENSCVAG00000006635	ddx55	98	74.729	ENSHCOG00000004710	ddx55	99	75.000	Hippocampus_comes
ENSCVAG00000006635	ddx55	100	77.909	ENSIPUG00000014551	ddx55	97	77.909	Ictalurus_punctatus
ENSCVAG00000006635	ddx55	99	71.502	ENSSTOG00000006121	DDX55	98	71.502	Ictidomys_tridecemlineatus
ENSCVAG00000006635	ddx55	98	73.276	ENSJJAG00000013401	Ddx55	96	73.276	Jaculus_jaculus
ENSCVAG00000006635	ddx55	100	85.642	ENSKMAG00000022006	ddx55	100	85.642	Kryptolebias_marmoratus
ENSCVAG00000006635	ddx55	99	83.249	ENSLBEG00000021815	ddx55	98	83.249	Labrus_bergylta
ENSCVAG00000006635	ddx55	98	74.829	ENSLACG00000017050	DDX55	97	74.829	Latimeria_chalumnae
ENSCVAG00000006635	ddx55	99	77.834	ENSLOCG00000005828	ddx55	98	77.834	Lepisosteus_oculatus
ENSCVAG00000006635	ddx55	98	73.793	ENSLAFG00000007293	DDX55	97	73.793	Loxodonta_africana
ENSCVAG00000006635	ddx55	98	73.621	ENSMFAG00000038165	DDX55	96	73.621	Macaca_fascicularis
ENSCVAG00000006635	ddx55	98	73.621	ENSMMUG00000013178	DDX55	96	73.621	Macaca_mulatta
ENSCVAG00000006635	ddx55	98	73.621	ENSMNEG00000028630	DDX55	96	73.621	Macaca_nemestrina
ENSCVAG00000006635	ddx55	98	73.793	ENSMLEG00000039187	DDX55	96	73.793	Mandrillus_leucophaeus
ENSCVAG00000006635	ddx55	99	84.433	ENSMAMG00000011297	ddx55	98	84.433	Mastacembelus_armatus
ENSCVAG00000006635	ddx55	100	86.993	ENSMZEG00005008047	ddx55	100	86.993	Maylandia_zebra
ENSCVAG00000006635	ddx55	99	68.591	ENSMGAG00000003185	DDX55	99	68.591	Meleagris_gallopavo
ENSCVAG00000006635	ddx55	99	73.549	ENSMAUG00000020054	Ddx55	97	73.549	Mesocricetus_auratus
ENSCVAG00000006635	ddx55	99	65.775	ENSMICG00000006477	DDX55	98	65.775	Microcebus_murinus
ENSCVAG00000006635	ddx55	99	73.504	ENSMOCG00000021289	Ddx55	97	73.504	Microtus_ochrogaster
ENSCVAG00000006635	ddx55	100	83.953	ENSMMOG00000009411	ddx55	98	83.953	Mola_mola
ENSCVAG00000006635	ddx55	92	74.816	ENSMODG00000012519	DDX55	94	74.816	Monodelphis_domestica
ENSCVAG00000006635	ddx55	99	85.357	ENSMALG00000018543	ddx55	98	85.357	Monopterus_albus
ENSCVAG00000006635	ddx55	75	76.906	MGP_CAROLIEiJ_G0027755	-	99	76.906	Mus_caroli
ENSCVAG00000006635	ddx55	99	73.675	ENSMUSG00000029389	Ddx55	97	73.675	Mus_musculus
ENSCVAG00000006635	ddx55	99	70.608	MGP_PahariEiJ_G0024335	Ddx55	98	70.608	Mus_pahari
ENSCVAG00000006635	ddx55	99	73.504	MGP_SPRETEiJ_G0028753	Ddx55	97	73.504	Mus_spretus
ENSCVAG00000006635	ddx55	98	68.793	ENSMPUG00000001505	DDX55	96	68.793	Mustela_putorius_furo
ENSCVAG00000006635	ddx55	88	62.738	ENSMLUG00000025148	-	96	62.738	Myotis_lucifugus
ENSCVAG00000006635	ddx55	98	65.636	ENSMLUG00000001265	-	96	65.000	Myotis_lucifugus
ENSCVAG00000006635	ddx55	98	72.931	ENSNGAG00000020564	Ddx55	96	72.931	Nannospalax_galili
ENSCVAG00000006635	ddx55	100	87.162	ENSNBRG00000018748	ddx55	100	87.162	Neolamprologus_brichardi
ENSCVAG00000006635	ddx55	98	73.966	ENSNLEG00000001658	DDX55	96	73.966	Nomascus_leucogenys
ENSCVAG00000006635	ddx55	99	69.966	ENSMEUG00000013689	DDX55	96	70.466	Notamacropus_eugenii
ENSCVAG00000006635	ddx55	99	71.307	ENSOPRG00000000850	DDX55	98	71.307	Ochotona_princeps
ENSCVAG00000006635	ddx55	95	58.824	ENSODEG00000016592	-	100	58.481	Octodon_degus
ENSCVAG00000006635	ddx55	99	71.791	ENSODEG00000009632	-	99	71.791	Octodon_degus
ENSCVAG00000006635	ddx55	100	87.331	ENSONIG00000015311	ddx55	98	87.331	Oreochromis_niloticus
ENSCVAG00000006635	ddx55	94	74.234	ENSOANG00000015332	DDX55	98	74.234	Ornithorhynchus_anatinus
ENSCVAG00000006635	ddx55	99	70.875	ENSOCUG00000003456	DDX55	99	70.875	Oryctolagus_cuniculus
ENSCVAG00000006635	ddx55	100	81.926	ENSORLG00000029482	ddx55	99	81.926	Oryzias_latipes
ENSCVAG00000006635	ddx55	100	81.419	ENSORLG00015004885	ddx55	98	82.936	Oryzias_latipes_hsok
ENSCVAG00000006635	ddx55	100	81.757	ENSOMEG00000023619	ddx55	99	81.757	Oryzias_melastigma
ENSCVAG00000006635	ddx55	98	72.069	ENSOGAG00000009195	DDX55	96	72.069	Otolemur_garnettii
ENSCVAG00000006635	ddx55	98	74.310	ENSOARG00000003364	DDX55	96	74.310	Ovis_aries
ENSCVAG00000006635	ddx55	98	74.310	ENSPPAG00000005988	DDX55	96	74.310	Pan_paniscus
ENSCVAG00000006635	ddx55	98	73.057	ENSPPRG00000012157	DDX55	96	73.057	Panthera_pardus
ENSCVAG00000006635	ddx55	92	74.401	ENSPTIG00000011490	DDX55	90	74.401	Panthera_tigris_altaica
ENSCVAG00000006635	ddx55	98	74.138	ENSPTRG00000005601	DDX55	96	74.138	Pan_troglodytes
ENSCVAG00000006635	ddx55	98	73.793	ENSPANG00000007905	DDX55	96	73.793	Papio_anubis
ENSCVAG00000006635	ddx55	98	79.862	ENSPKIG00000023661	ddx55	99	79.862	Paramormyrops_kingsleyae
ENSCVAG00000006635	ddx55	94	74.865	ENSPSIG00000012901	DDX55	98	75.461	Pelodiscus_sinensis
ENSCVAG00000006635	ddx55	92	80.110	ENSPMGG00000017224	ddx55	100	80.110	Periophthalmus_magnuspinnatus
ENSCVAG00000006635	ddx55	99	73.891	ENSPEMG00000018052	Ddx55	97	73.891	Peromyscus_maniculatus_bairdii
ENSCVAG00000006635	ddx55	87	64.313	ENSPMAG00000007486	ddx55	96	65.810	Petromyzon_marinus
ENSCVAG00000006635	ddx55	88	74.761	ENSPCIG00000010973	DDX55	94	74.761	Phascolarctos_cinereus
ENSCVAG00000006635	ddx55	100	91.077	ENSPFOG00000006970	ddx55	92	91.077	Poecilia_formosa
ENSCVAG00000006635	ddx55	100	90.878	ENSPLAG00000014735	ddx55	100	90.878	Poecilia_latipinna
ENSCVAG00000006635	ddx55	100	91.385	ENSPMEG00000020635	ddx55	100	91.385	Poecilia_mexicana
ENSCVAG00000006635	ddx55	100	90.709	ENSPREG00000016644	ddx55	100	90.709	Poecilia_reticulata
ENSCVAG00000006635	ddx55	98	72.414	ENSPPYG00000005091	DDX55	96	72.414	Pongo_abelii
ENSCVAG00000006635	ddx55	98	73.448	ENSPCAG00000014127	DDX55	96	73.448	Procavia_capensis
ENSCVAG00000006635	ddx55	98	72.931	ENSPCOG00000011189	DDX55	96	72.931	Propithecus_coquereli
ENSCVAG00000006635	ddx55	99	70.339	ENSPVAG00000015321	DDX55	98	70.339	Pteropus_vampyrus
ENSCVAG00000006635	ddx55	100	86.824	ENSPNYG00000003669	ddx55	100	86.824	Pundamilia_nyererei
ENSCVAG00000006635	ddx55	100	78.547	ENSPNAG00000012855	ddx55	98	78.547	Pygocentrus_nattereri
ENSCVAG00000006635	ddx55	99	73.846	ENSRNOG00000001043	Ddx55	97	73.846	Rattus_norvegicus
ENSCVAG00000006635	ddx55	98	72.931	ENSRBIG00000044699	DDX55	96	72.931	Rhinopithecus_bieti
ENSCVAG00000006635	ddx55	98	73.276	ENSRROG00000024824	DDX55	96	73.276	Rhinopithecus_roxellana
ENSCVAG00000006635	ddx55	90	37.968	YFL002C	-	88	37.818	Saccharomyces_cerevisiae
ENSCVAG00000006635	ddx55	98	72.366	ENSSBOG00000024833	DDX55	96	73.448	Saimiri_boliviensis_boliviensis
ENSCVAG00000006635	ddx55	94	74.460	ENSSHAG00000015820	DDX55	98	74.460	Sarcophilus_harrisii
ENSCVAG00000006635	ddx55	99	78.378	ENSSFOG00015017496	ddx55	97	78.378	Scleropages_formosus
ENSCVAG00000006635	ddx55	100	84.396	ENSSMAG00000010441	ddx55	99	84.732	Scophthalmus_maximus
ENSCVAG00000006635	ddx55	99	85.085	ENSSDUG00000023568	ddx55	98	85.085	Seriola_dumerili
ENSCVAG00000006635	ddx55	100	84.670	ENSSLDG00000011299	ddx55	98	84.670	Seriola_lalandi_dorsalis
ENSCVAG00000006635	ddx55	91	72.778	ENSSARG00000003842	DDX55	97	72.376	Sorex_araneus
ENSCVAG00000006635	ddx55	99	73.051	ENSSPUG00000012798	DDX55	99	73.051	Sphenodon_punctatus
ENSCVAG00000006635	ddx55	99	85.932	ENSSPAG00000011806	ddx55	98	85.932	Stegastes_partitus
ENSCVAG00000006635	ddx55	88	75.191	ENSSSCG00000009771	DDX55	94	75.191	Sus_scrofa
ENSCVAG00000006635	ddx55	98	73.183	ENSTGUG00000005302	-	99	72.449	Taeniopygia_guttata
ENSCVAG00000006635	ddx55	100	83.108	ENSTRUG00000018525	ddx55	99	83.108	Takifugu_rubripes
ENSCVAG00000006635	ddx55	98	83.045	ENSTNIG00000013515	DDX55	96	83.045	Tetraodon_nigroviridis
ENSCVAG00000006635	ddx55	75	69.438	ENSTBEG00000010822	DDX55	100	69.438	Tupaia_belangeri
ENSCVAG00000006635	ddx55	98	73.966	ENSTTRG00000007251	DDX55	96	73.966	Tursiops_truncatus
ENSCVAG00000006635	ddx55	98	70.812	ENSUAMG00000012589	DDX55	96	70.812	Ursus_americanus
ENSCVAG00000006635	ddx55	91	72.015	ENSUMAG00000003869	DDX55	96	72.015	Ursus_maritimus
ENSCVAG00000006635	ddx55	91	69.088	ENSVPAG00000007028	DDX55	96	69.088	Vicugna_pacos
ENSCVAG00000006635	ddx55	99	71.282	ENSVVUG00000027506	DDX55	99	73.800	Vulpes_vulpes
ENSCVAG00000006635	ddx55	99	72.250	ENSXETG00000005825	ddx55	99	72.250	Xenopus_tropicalis
ENSCVAG00000006635	ddx55	100	90.203	ENSXCOG00000010120	ddx55	100	90.203	Xiphophorus_couchianus
ENSCVAG00000006635	ddx55	100	90.203	ENSXMAG00000011731	ddx55	100	90.203	Xiphophorus_maculatus