EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000006659 (Gene tree)
Gene ID: 107083880
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 248-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 2790 bases
Position: chrKL652586.1:41426-44215
Accession: 107083880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000023373	zf-C2H2	PF00096.26	1.5e-18	1	4
ENSCVAP00000023373	zf-C2H2	PF00096.26	1.5e-18	2	4
ENSCVAP00000023373	zf-C2H2	PF00096.26	1.5e-18	3	4
ENSCVAP00000023373	zf-C2H2	PF00096.26	1.5e-18	4	4
ENSCVAP00000023373	zf-met	PF12874.7	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000006914	-	1204	XM_015373404	ENSCVAP00000023373	331 (aa)	XP_015228890	UPI0007426E11

Gene Model

Click here to download ENSCVAG00000006659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000006659	-	50	47.170	ENSCVAG00000018383	-	89	47.170
ENSCVAG00000006659	-	100	47.706	ENSCVAG00000016883	-	99	47.706
ENSCVAG00000006659	-	72	49.425	ENSCVAG00000000419	-	92	42.241
ENSCVAG00000006659	-	73	45.299	ENSCVAG00000019537	-	91	45.299
ENSCVAG00000006659	-	77	45.045	ENSCVAG00000006389	-	99	45.690
ENSCVAG00000006659	-	80	41.905	ENSCVAG00000008535	-	85	41.905
ENSCVAG00000006659	-	77	49.515	ENSCVAG00000006491	-	84	49.515
ENSCVAG00000006659	-	97	46.011	ENSCVAG00000016906	-	99	46.011
ENSCVAG00000006659	-	97	31.884	ENSCVAG00000011712	-	95	31.884
ENSCVAG00000006659	-	81	48.649	ENSCVAG00000010442	-	96	52.381
ENSCVAG00000006659	-	57	50.000	ENSCVAG00000012343	-	92	50.000
ENSCVAG00000006659	-	74	41.379	ENSCVAG00000011334	-	97	41.379
ENSCVAG00000006659	-	82	40.876	ENSCVAG00000001568	-	99	40.876
ENSCVAG00000006659	-	56	45.045	ENSCVAG00000019097	-	75	45.714
ENSCVAG00000006659	-	98	42.593	ENSCVAG00000004508	-	99	42.593
ENSCVAG00000006659	-	74	48.624	ENSCVAG00000000227	-	89	48.624
ENSCVAG00000006659	-	75	44.144	ENSCVAG00000015616	-	96	44.144
ENSCVAG00000006659	-	51	47.706	ENSCVAG00000020126	-	89	47.706
ENSCVAG00000006659	-	85	45.679	ENSCVAG00000019646	-	93	45.679
ENSCVAG00000006659	-	73	48.649	ENSCVAG00000000423	-	96	48.649
ENSCVAG00000006659	-	98	45.499	ENSCVAG00000016924	-	99	55.422
ENSCVAG00000006659	-	75	43.158	ENSCVAG00000021225	-	98	43.158
ENSCVAG00000006659	-	56	43.443	ENSCVAG00000006460	-	72	43.443
ENSCVAG00000006659	-	73	47.788	ENSCVAG00000012543	-	99	49.074
ENSCVAG00000006659	-	70	52.336	ENSCVAG00000011469	-	99	52.336
ENSCVAG00000006659	-	68	52.294	ENSCVAG00000023054	-	75	52.294
ENSCVAG00000006659	-	80	49.550	ENSCVAG00000012302	-	99	49.550
ENSCVAG00000006659	-	72	49.505	ENSCVAG00000014269	-	97	45.690
ENSCVAG00000006659	-	51	42.593	ENSCVAG00000013048	-	65	38.182
ENSCVAG00000006659	-	63	50.000	ENSCVAG00000012180	-	97	50.000
ENSCVAG00000006659	-	73	51.852	ENSCVAG00000005494	-	99	51.852
ENSCVAG00000006659	-	76	44.144	ENSCVAG00000003396	-	96	44.144
ENSCVAG00000006659	-	73	43.836	ENSCVAG00000009981	-	98	43.836
ENSCVAG00000006659	-	100	48.624	ENSCVAG00000013337	-	99	48.624
ENSCVAG00000006659	-	77	46.847	ENSCVAG00000008206	-	95	46.847
ENSCVAG00000006659	-	74	47.748	ENSCVAG00000008200	-	99	47.748
ENSCVAG00000006659	-	80	50.588	ENSCVAG00000002833	-	83	50.588
ENSCVAG00000006659	-	73	45.946	ENSCVAG00000016796	-	83	49.485
ENSCVAG00000006659	-	76	47.273	ENSCVAG00000014322	-	99	47.273
ENSCVAG00000006659	-	79	49.138	ENSCVAG00000010160	-	89	49.138
ENSCVAG00000006659	-	79	33.712	ENSCVAG00000019705	-	81	33.712
ENSCVAG00000006659	-	69	56.383	ENSCVAG00000017890	-	94	56.383
ENSCVAG00000006659	-	98	46.341	ENSCVAG00000006484	-	88	35.976
ENSCVAG00000006659	-	50	49.624	ENSCVAG00000020141	-	85	49.624
ENSCVAG00000006659	-	86	47.706	ENSCVAG00000001767	-	91	47.706
ENSCVAG00000006659	-	73	39.167	ENSCVAG00000006653	-	72	39.167
ENSCVAG00000006659	-	73	47.917	ENSCVAG00000001369	-	92	47.917
ENSCVAG00000006659	-	99	42.342	ENSCVAG00000020414	-	100	47.706
ENSCVAG00000006659	-	83	43.820	ENSCVAG00000002295	-	95	43.820
ENSCVAG00000006659	-	59	46.226	ENSCVAG00000021107	-	97	46.226
ENSCVAG00000006659	-	56	36.410	ENSCVAG00000015159	-	60	36.410
ENSCVAG00000006659	-	51	45.283	ENSCVAG00000020968	-	58	45.283
ENSCVAG00000006659	-	55	52.083	ENSCVAG00000001609	-	85	52.083
ENSCVAG00000006659	-	98	54.630	ENSCVAG00000006667	-	99	54.630
ENSCVAG00000006659	-	76	53.086	ENSCVAG00000020745	-	96	53.086
ENSCVAG00000006659	-	98	53.211	ENSCVAG00000016915	-	100	53.211
ENSCVAG00000006659	-	99	44.954	ENSCVAG00000007073	-	93	44.954
ENSCVAG00000006659	-	79	49.550	ENSCVAG00000022991	-	94	54.945
ENSCVAG00000006659	-	73	48.148	ENSCVAG00000003497	-	99	48.148
ENSCVAG00000006659	-	76	44.444	ENSCVAG00000003514	-	99	44.444
ENSCVAG00000006659	-	58	44.706	ENSCVAG00000007169	-	65	44.706
ENSCVAG00000006659	-	94	48.673	ENSCVAG00000012248	-	97	48.673
ENSCVAG00000006659	-	72	45.045	ENSCVAG00000014404	-	98	45.045
ENSCVAG00000006659	-	95	64.286	ENSCVAG00000019767	-	99	52.294
ENSCVAG00000006659	-	74	49.550	ENSCVAG00000006673	-	86	49.550

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006659	-	55	43.966	ENSACIG00000003515	-	96	43.966	Amphilophus_citrinellus
ENSCVAG00000006659	-	83	47.222	ENSACIG00000000286	-	88	47.222	Amphilophus_citrinellus
ENSCVAG00000006659	-	79	48.438	ENSACIG00000017050	-	99	46.667	Amphilophus_citrinellus
ENSCVAG00000006659	-	98	43.902	ENSAOCG00000012823	-	75	43.284	Amphiprion_ocellaris
ENSCVAG00000006659	-	98	39.948	ENSAPEG00000005566	-	98	48.810	Amphiprion_percula
ENSCVAG00000006659	-	98	43.103	ENSATEG00000011221	-	67	43.103	Anabas_testudineus
ENSCVAG00000006659	-	98	38.889	ENSATEG00000008771	-	91	38.889	Anabas_testudineus
ENSCVAG00000006659	-	75	44.340	ENSACLG00000028002	-	98	44.340	Astatotilapia_calliptera
ENSCVAG00000006659	-	53	44.737	ENSACLG00000023979	-	92	56.522	Astatotilapia_calliptera
ENSCVAG00000006659	-	81	48.598	ENSACLG00000011237	-	99	48.598	Astatotilapia_calliptera
ENSCVAG00000006659	-	57	48.810	ENSACLG00000024308	-	97	49.541	Astatotilapia_calliptera
ENSCVAG00000006659	-	52	52.294	ENSAMXG00000039004	-	88	52.294	Astyanax_mexicanus
ENSCVAG00000006659	-	51	47.561	ENSAMXG00000037382	-	59	41.975	Astyanax_mexicanus
ENSCVAG00000006659	-	75	44.144	ENSCSEG00000008502	-	97	42.857	Cynoglossus_semilaevis
ENSCVAG00000006659	-	53	43.689	ENSCSEG00000004348	-	82	43.269	Cynoglossus_semilaevis
ENSCVAG00000006659	-	75	50.467	ENSCSEG00000020696	-	99	49.550	Cynoglossus_semilaevis
ENSCVAG00000006659	-	99	48.182	ENSELUG00000001968	-	99	48.182	Esox_lucius
ENSCVAG00000006659	-	60	48.214	ENSELUG00000013245	-	85	48.214	Esox_lucius
ENSCVAG00000006659	-	99	40.541	ENSELUG00000016397	-	91	40.541	Esox_lucius
ENSCVAG00000006659	-	100	44.144	ENSELUG00000005912	-	99	44.144	Esox_lucius
ENSCVAG00000006659	-	75	47.170	ENSFHEG00000013530	-	77	47.170	Fundulus_heteroclitus
ENSCVAG00000006659	-	82	48.148	ENSFHEG00000018874	-	88	48.148	Fundulus_heteroclitus
ENSCVAG00000006659	-	98	53.846	ENSGAFG00000010524	-	99	53.846	Gambusia_affinis
ENSCVAG00000006659	-	87	49.383	ENSGAFG00000011288	-	99	49.383	Gambusia_affinis
ENSCVAG00000006659	-	80	55.340	ENSGAFG00000018645	-	98	55.340	Gambusia_affinis
ENSCVAG00000006659	-	65	49.541	ENSGAGG00000006846	-	99	49.541	Gopherus_agassizii
ENSCVAG00000006659	-	98	43.182	ENSHBUG00000006977	-	99	43.182	Haplochromis_burtoni
ENSCVAG00000006659	-	52	48.696	ENSHBUG00000013542	-	62	48.696	Haplochromis_burtoni
ENSCVAG00000006659	-	73	46.847	ENSHCOG00000000627	-	84	46.847	Hippocampus_comes
ENSCVAG00000006659	-	74	48.113	ENSHCOG00000001338	-	99	48.113	Hippocampus_comes
ENSCVAG00000006659	-	98	46.789	ENSHCOG00000001942	-	100	46.789	Hippocampus_comes
ENSCVAG00000006659	-	98	39.806	ENSHCOG00000008234	-	98	39.806	Hippocampus_comes
ENSCVAG00000006659	-	74	48.182	ENSHCOG00000019497	-	93	48.182	Hippocampus_comes
ENSCVAG00000006659	-	87	45.946	ENSHCOG00000000138	-	99	45.946	Hippocampus_comes
ENSCVAG00000006659	-	81	48.148	ENSHCOG00000001448	-	83	48.148	Hippocampus_comes
ENSCVAG00000006659	-	75	44.954	ENSHCOG00000015414	-	91	44.954	Hippocampus_comes
ENSCVAG00000006659	-	84	53.211	ENSHCOG00000001638	-	95	53.211	Hippocampus_comes
ENSCVAG00000006659	-	98	48.235	ENSHCOG00000014855	-	96	48.235	Hippocampus_comes
ENSCVAG00000006659	-	82	42.202	ENSKMAG00000000795	-	99	47.253	Kryptolebias_marmoratus
ENSCVAG00000006659	-	52	44.660	ENSLBEG00000028271	-	81	44.660	Labrus_bergylta
ENSCVAG00000006659	-	52	45.192	ENSLBEG00000009580	-	72	45.192	Labrus_bergylta
ENSCVAG00000006659	-	51	51.786	ENSLBEG00000024536	-	90	51.786	Labrus_bergylta
ENSCVAG00000006659	-	58	45.918	ENSMAMG00000022502	-	93	43.590	Mastacembelus_armatus
ENSCVAG00000006659	-	56	46.053	ENSMMOG00000007855	-	93	47.917	Mola_mola
ENSCVAG00000006659	-	100	47.934	ENSMALG00000012043	-	98	47.934	Monopterus_albus
ENSCVAG00000006659	-	56	43.750	ENSMALG00000008786	-	88	43.750	Monopterus_albus
ENSCVAG00000006659	-	97	41.975	ENSONIG00000016734	-	99	41.975	Oreochromis_niloticus
ENSCVAG00000006659	-	79	50.000	ENSORLG00000024174	-	99	52.632	Oryzias_latipes
ENSCVAG00000006659	-	77	52.326	ENSORLG00015011871	-	97	63.636	Oryzias_latipes_hsok
ENSCVAG00000006659	-	67	49.550	ENSOMEG00000019853	-	92	49.550	Oryzias_melastigma
ENSCVAG00000006659	-	51	48.113	ENSPSIG00000005128	-	100	48.113	Pelodiscus_sinensis
ENSCVAG00000006659	-	98	31.790	ENSPMGG00000006845	-	98	38.889	Periophthalmus_magnuspinnatus
ENSCVAG00000006659	-	58	51.765	ENSPMGG00000006070	-	86	50.847	Periophthalmus_magnuspinnatus
ENSCVAG00000006659	-	69	34.802	ENSPMGG00000005349	-	86	34.802	Periophthalmus_magnuspinnatus
ENSCVAG00000006659	-	53	44.860	ENSPMGG00000011473	-	96	44.860	Periophthalmus_magnuspinnatus
ENSCVAG00000006659	-	79	49.383	ENSPFOG00000007919	-	100	52.252	Poecilia_formosa
ENSCVAG00000006659	-	54	49.107	ENSPFOG00000001339	-	100	49.107	Poecilia_formosa
ENSCVAG00000006659	-	63	42.857	ENSPFOG00000017913	-	99	44.248	Poecilia_formosa
ENSCVAG00000006659	-	55	40.000	ENSPFOG00000024398	-	72	40.000	Poecilia_formosa
ENSCVAG00000006659	-	63	42.857	ENSPLAG00000000470	-	65	42.857	Poecilia_latipinna
ENSCVAG00000006659	-	73	46.122	ENSPLAG00000015603	-	93	46.122	Poecilia_latipinna
ENSCVAG00000006659	-	69	47.706	ENSPLAG00000021050	-	99	47.706	Poecilia_latipinna
ENSCVAG00000006659	-	69	47.706	ENSPLAG00000011798	-	99	47.706	Poecilia_latipinna
ENSCVAG00000006659	-	65	48.416	ENSPMEG00000021016	-	73	48.636	Poecilia_mexicana
ENSCVAG00000006659	-	83	55.372	ENSPMEG00000023808	-	99	55.372	Poecilia_mexicana
ENSCVAG00000006659	-	66	44.037	ENSPMEG00000014725	-	92	44.037	Poecilia_mexicana
ENSCVAG00000006659	-	85	59.459	ENSPREG00000020014	-	99	58.599	Poecilia_reticulata
ENSCVAG00000006659	-	80	48.624	ENSPNYG00000018920	-	99	48.624	Pundamilia_nyererei
ENSCVAG00000006659	-	98	43.925	ENSPNYG00000018372	-	100	43.925	Pundamilia_nyererei
ENSCVAG00000006659	-	56	49.558	ENSPNAG00000005857	-	96	49.558	Pygocentrus_nattereri
ENSCVAG00000006659	-	76	48.182	ENSSMAG00000015347	-	94	48.182	Scophthalmus_maximus
ENSCVAG00000006659	-	52	48.214	ENSSDUG00000007336	-	96	50.820	Seriola_dumerili
ENSCVAG00000006659	-	53	45.588	ENSSDUG00000015622	-	79	45.872	Seriola_dumerili
ENSCVAG00000006659	-	98	50.649	ENSSDUG00000009425	-	99	50.649	Seriola_dumerili
ENSCVAG00000006659	-	59	46.154	ENSSDUG00000004867	-	94	46.835	Seriola_dumerili
ENSCVAG00000006659	-	62	45.872	ENSSLDG00000005850	-	98	45.872	Seriola_lalandi_dorsalis
ENSCVAG00000006659	-	62	50.000	ENSSLDG00000016317	-	99	48.214	Seriola_lalandi_dorsalis
ENSCVAG00000006659	-	74	39.474	ENSSPAG00000005739	-	61	39.474	Stegastes_partitus
ENSCVAG00000006659	-	63	47.273	ENSXCOG00000007957	-	94	46.847	Xiphophorus_couchianus
ENSCVAG00000006659	-	73	47.706	ENSXCOG00000007406	-	98	47.706	Xiphophorus_couchianus
ENSCVAG00000006659	-	84	48.148	ENSXCOG00000016860	-	94	52.542	Xiphophorus_couchianus
ENSCVAG00000006659	-	99	48.182	ENSXCOG00000001200	-	94	48.182	Xiphophorus_couchianus
ENSCVAG00000006659	-	51	49.091	ENSXMAG00000020039	-	97	52.294	Xiphophorus_maculatus
ENSCVAG00000006659	-	73	43.810	ENSXMAG00000024641	-	94	46.847	Xiphophorus_maculatus
ENSCVAG00000006659	-	75	47.748	ENSXMAG00000026477	-	89	47.748	Xiphophorus_maculatus
ENSCVAG00000006659	-	56	52.252	ENSXMAG00000026679	-	99	50.450	Xiphophorus_maculatus
ENSCVAG00000006659	-	71	49.091	ENSXMAG00000027906	-	99	49.091	Xiphophorus_maculatus