EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000006741 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 9879 bases
Position: chrKL652691.1:991521-1001399
Accession: 107087692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000005338	tRNA_int_end_N2	PF12928.7	7e-13	1	1
ENSCVAP00000005353	tRNA_int_end_N2	PF12928.7	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000006830	-	753	XM_015379404	ENSCVAP00000005353	250 (aa)	XP_015234890	-
ENSCVAT00000006842	-	372	-	ENSCVAP00000005338	123 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000006741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006741's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006741	-	79	56.311	ENSG00000182173	TSEN54	97	65.714	Homo_sapiens
ENSCVAG00000006741	-	74	59.794	ENSCPOG00000004630	-	56	59.794	Cavia_porcellus
ENSCVAG00000006741	-	76	58.000	ENSCANG00000028053	TSEN54	53	59.794	Colobus_angolensis_palliatus
ENSCVAG00000006741	-	76	58.000	ENSMFAG00000000712	TSEN54	54	59.794	Macaca_fascicularis
ENSCVAG00000006741	-	74	59.794	ENSMMUG00000022123	TSEN54	54	59.794	Macaca_mulatta
ENSCVAG00000006741	-	76	58.000	ENSMNEG00000029199	TSEN54	54	59.794	Macaca_nemestrina
ENSCVAG00000006741	-	76	56.566	ENSNLEG00000001071	-	66	56.566	Nomascus_leucogenys
ENSCVAG00000006741	-	74	58.763	ENSODEG00000010059	-	56	58.763	Octodon_degus
ENSCVAG00000006741	-	65	82.500	ENSORLG00015009413	tsen54	52	82.500	Oryzias_latipes_hsok
ENSCVAG00000006741	-	76	57.000	ENSPTRG00000009646	TSEN54	54	58.763	Pan_troglodytes
ENSCVAG00000006741	-	76	58.000	ENSPANG00000020133	TSEN54	54	59.794	Papio_anubis
ENSCVAG00000006741	-	89	68.966	ENSPMGG00000019578	tsen54	55	68.966	Periophthalmus_magnuspinnatus
ENSCVAG00000006741	-	76	58.000	ENSRBIG00000043040	TSEN54	53	59.794	Rhinopithecus_bieti
ENSCVAG00000006741	-	74	57.732	ENSUAMG00000010045	TSEN54	58	57.732	Ursus_americanus
ENSCVAG00000006741	-	77	51.485	ENSXETG00000012532	tsen54	50	60.000	Xenopus_tropicalis
ENSCVAG00000006741	-	92	87.368	ENSXCOG00000018245	tsen54	54	87.368	Xiphophorus_couchianus