EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000006828 (Gene tree)
Gene ID: 107086054
Gene Symbol: fbxo18
Alias: si:dkey-22l11.2
Full Name: F-box DNA helicase 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 25724 bases
Position: chrKL652642.1:448883-474606
Accession: 107086054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000005447	UvrD-helicase	PF00580.21	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000006664	-	3012	XM_015376788	ENSCVAP00000005447	882 (aa)	XP_015232274	-

Gene Model

Click here to download ENSCVAG00000006828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006828	fbxo18	99	40.265	ENSG00000134452	FBH1	83	40.265	Homo_sapiens
ENSCVAG00000006828	fbxo18	99	64.516	ENSAPOG00000007042	fbxo18	84	64.516	Acanthochromis_polyacanthus
ENSCVAG00000006828	fbxo18	99	40.839	ENSAMEG00000002043	FBH1	83	41.170	Ailuropoda_melanoleuca
ENSCVAG00000006828	fbxo18	99	57.930	ENSACIG00000006171	fbxo18	82	57.930	Amphilophus_citrinellus
ENSCVAG00000006828	fbxo18	99	65.184	ENSAOCG00000014826	fbxo18	84	65.184	Amphiprion_ocellaris
ENSCVAG00000006828	fbxo18	99	64.706	ENSAPEG00000022846	fbxo18	84	64.928	Amphiprion_percula
ENSCVAG00000006828	fbxo18	99	61.573	ENSATEG00000004547	fbxo18	83	61.173	Anabas_testudineus
ENSCVAG00000006828	fbxo18	98	38.074	ENSAPLG00000009754	FBH1	84	37.738	Anas_platyrhynchos
ENSCVAG00000006828	fbxo18	85	42.288	ENSACAG00000002729	FBH1	71	42.288	Anolis_carolinensis
ENSCVAG00000006828	fbxo18	99	40.155	ENSANAG00000032436	FBH1	83	40.155	Aotus_nancymaae
ENSCVAG00000006828	fbxo18	99	64.880	ENSACLG00000004266	fbxo18	84	65.749	Astatotilapia_calliptera
ENSCVAG00000006828	fbxo18	99	46.556	ENSAMXG00000020772	fbxo18	91	46.333	Astyanax_mexicanus
ENSCVAG00000006828	fbxo18	99	40.264	ENSBTAG00000004147	FBH1	86	40.414	Bos_taurus
ENSCVAG00000006828	fbxo18	99	40.222	ENSCJAG00000020531	FBH1	83	40.222	Callithrix_jacchus
ENSCVAG00000006828	fbxo18	81	44.307	ENSCAFG00000005218	FBH1	70	45.597	Canis_familiaris
ENSCVAG00000006828	fbxo18	81	44.307	ENSCAFG00020005396	FBH1	70	45.597	Canis_lupus_dingo
ENSCVAG00000006828	fbxo18	99	40.355	ENSCHIG00000016303	FBH1	83	40.372	Capra_hircus
ENSCVAG00000006828	fbxo18	99	38.079	ENSCPOG00000010580	FBH1	82	38.411	Cavia_porcellus
ENSCVAG00000006828	fbxo18	99	39.737	ENSCCAG00000023218	FBH1	83	39.978	Cebus_capucinus
ENSCVAG00000006828	fbxo18	85	48.958	ENSCATG00000035430	FBH1	71	49.301	Cercocebus_atys
ENSCVAG00000006828	fbxo18	99	40.088	ENSCLAG00000008089	FBH1	83	40.130	Chinchilla_lanigera
ENSCVAG00000006828	fbxo18	78	44.744	ENSCSAG00000013644	FBH1	70	44.808	Chlorocebus_sabaeus
ENSCVAG00000006828	fbxo18	99	37.283	ENSCPBG00000019260	FBH1	83	36.511	Chrysemys_picta_bellii
ENSCVAG00000006828	fbxo18	99	39.714	ENSCANG00000023461	FBH1	83	39.824	Colobus_angolensis_palliatus
ENSCVAG00000006828	fbxo18	99	38.962	ENSCGRG00001018795	Fbh1	83	39.410	Cricetulus_griseus_chok1gshd
ENSCVAG00000006828	fbxo18	99	38.962	ENSCGRG00000008471	Fbh1	83	39.410	Cricetulus_griseus_crigri
ENSCVAG00000006828	fbxo18	78	49.784	ENSCSEG00000018212	fbxo18	73	49.791	Cynoglossus_semilaevis
ENSCVAG00000006828	fbxo18	99	46.659	ENSDARG00000062983	fbxo18	82	46.823	Danio_rerio
ENSCVAG00000006828	fbxo18	99	40.308	ENSETEG00000019856	FBH1	83	40.505	Echinops_telfairi
ENSCVAG00000006828	fbxo18	98	40.463	ENSEASG00005019192	FBH1	82	40.794	Equus_asinus_asinus
ENSCVAG00000006828	fbxo18	98	40.463	ENSECAG00000006839	FBH1	82	40.794	Equus_caballus
ENSCVAG00000006828	fbxo18	82	47.080	ENSEEUG00000000461	FBH1	59	47.080	Erinaceus_europaeus
ENSCVAG00000006828	fbxo18	99	50.442	ENSELUG00000006556	fbxo18	83	50.277	Esox_lucius
ENSCVAG00000006828	fbxo18	99	40.374	ENSFCAG00000009004	FBH1	81	40.684	Felis_catus
ENSCVAG00000006828	fbxo18	99	40.684	ENSFDAG00000009830	FBH1	83	40.622	Fukomys_damarensis
ENSCVAG00000006828	fbxo18	99	76.760	ENSFHEG00000007533	fbxo18	83	77.207	Fundulus_heteroclitus
ENSCVAG00000006828	fbxo18	82	53.596	ENSGMOG00000010594	-	71	53.668	Gadus_morhua
ENSCVAG00000006828	fbxo18	98	39.558	ENSGALG00000008162	FBH1	83	38.852	Gallus_gallus
ENSCVAG00000006828	fbxo18	99	78.016	ENSGAFG00000004166	fbxo18	86	78.241	Gambusia_affinis
ENSCVAG00000006828	fbxo18	99	61.265	ENSGACG00000019171	fbxo18	83	61.043	Gasterosteus_aculeatus
ENSCVAG00000006828	fbxo18	99	40.089	ENSGAGG00000021773	FBH1	86	39.867	Gopherus_agassizii
ENSCVAG00000006828	fbxo18	99	39.934	ENSGGOG00000013326	FBXO18	83	39.934	Gorilla_gorilla
ENSCVAG00000006828	fbxo18	99	65.347	ENSHBUG00000016673	fbxo18	84	65.821	Haplochromis_burtoni
ENSCVAG00000006828	fbxo18	99	40.331	ENSHGLG00000015581	FBXO18	83	40.532	Heterocephalus_glaber_female
ENSCVAG00000006828	fbxo18	99	40.331	ENSHGLG00100009896	FBXO18	83	40.532	Heterocephalus_glaber_male
ENSCVAG00000006828	fbxo18	73	66.102	ENSHCOG00000010937	-	81	66.102	Hippocampus_comes
ENSCVAG00000006828	fbxo18	98	46.966	ENSIPUG00000019144	fbxo18	88	47.575	Ictalurus_punctatus
ENSCVAG00000006828	fbxo18	99	39.866	ENSSTOG00000006496	FBH1	83	40.044	Ictidomys_tridecemlineatus
ENSCVAG00000006828	fbxo18	99	71.269	ENSKMAG00000021437	fbxo18	81	71.158	Kryptolebias_marmoratus
ENSCVAG00000006828	fbxo18	99	65.491	ENSLBEG00000023717	fbxo18	84	65.380	Labrus_bergylta
ENSCVAG00000006828	fbxo18	70	37.342	ENSLACG00000013504	FBH1	77	37.599	Latimeria_chalumnae
ENSCVAG00000006828	fbxo18	99	43.468	ENSLOCG00000015655	fbxo18	82	43.356	Lepisosteus_oculatus
ENSCVAG00000006828	fbxo18	99	40.376	ENSLAFG00000013105	FBH1	83	40.442	Loxodonta_africana
ENSCVAG00000006828	fbxo18	99	39.934	ENSMMUG00000015143	FBH1	83	40.044	Macaca_mulatta
ENSCVAG00000006828	fbxo18	99	39.934	ENSMNEG00000043475	FBH1	83	40.044	Macaca_nemestrina
ENSCVAG00000006828	fbxo18	99	39.890	ENSMLEG00000035307	FBH1	83	40.000	Mandrillus_leucophaeus
ENSCVAG00000006828	fbxo18	99	63.243	ENSMAMG00000000527	fbxo18	84	62.987	Mastacembelus_armatus
ENSCVAG00000006828	fbxo18	99	64.880	ENSMZEG00005015202	fbxo18	84	65.749	Maylandia_zebra
ENSCVAG00000006828	fbxo18	99	40.331	ENSMICG00000009646	FBH1	94	41.624	Microcebus_murinus
ENSCVAG00000006828	fbxo18	99	56.966	ENSMMOG00000010268	fbxo18	83	56.742	Mola_mola
ENSCVAG00000006828	fbxo18	79	44.538	ENSMODG00000018516	FBH1	70	44.492	Monodelphis_domestica
ENSCVAG00000006828	fbxo18	99	63.070	ENSMALG00000010440	fbxo18	84	63.000	Monopterus_albus
ENSCVAG00000006828	fbxo18	99	39.290	MGP_CAROLIEiJ_G0023178	Fbh1	83	39.560	Mus_caroli
ENSCVAG00000006828	fbxo18	99	38.914	ENSMUSG00000058594	Fbh1	65	44.602	Mus_musculus
ENSCVAG00000006828	fbxo18	99	39.535	MGP_PahariEiJ_G0019237	Fbh1	83	39.846	Mus_pahari
ENSCVAG00000006828	fbxo18	99	39.294	MGP_SPRETEiJ_G0024095	Fbh1	83	39.803	Mus_spretus
ENSCVAG00000006828	fbxo18	99	40.639	ENSMPUG00000016343	FBH1	83	41.189	Mustela_putorius_furo
ENSCVAG00000006828	fbxo18	99	40.331	ENSMLUG00000000133	FBH1	83	39.890	Myotis_lucifugus
ENSCVAG00000006828	fbxo18	97	58.796	ENSNBRG00000018212	fbxo18	80	59.264	Neolamprologus_brichardi
ENSCVAG00000006828	fbxo18	99	39.714	ENSNLEG00000011537	FBH1	83	39.714	Nomascus_leucogenys
ENSCVAG00000006828	fbxo18	93	41.489	ENSOPRG00000002898	FBH1	77	42.063	Ochotona_princeps
ENSCVAG00000006828	fbxo18	99	40.243	ENSODEG00000004201	FBH1	83	40.819	Octodon_degus
ENSCVAG00000006828	fbxo18	99	65.385	ENSONIG00000011830	fbxo18	80	69.727	Oreochromis_niloticus
ENSCVAG00000006828	fbxo18	98	39.479	ENSOANG00000015459	FBH1	82	40.110	Ornithorhynchus_anatinus
ENSCVAG00000006828	fbxo18	98	40.625	ENSOCUG00000006237	FBH1	82	40.532	Oryctolagus_cuniculus
ENSCVAG00000006828	fbxo18	99	64.856	ENSORLG00000026493	fbxo18	84	64.784	Oryzias_latipes
ENSCVAG00000006828	fbxo18	99	63.036	ENSORLG00020004678	fbxo18	84	64.784	Oryzias_latipes_hni
ENSCVAG00000006828	fbxo18	99	64.706	ENSORLG00015001917	fbxo18	84	64.595	Oryzias_latipes_hsok
ENSCVAG00000006828	fbxo18	99	63.929	ENSOMEG00000011975	fbxo18	84	64.412	Oryzias_melastigma
ENSCVAG00000006828	fbxo18	99	41.020	ENSOGAG00000015682	FBH1	83	40.351	Otolemur_garnettii
ENSCVAG00000006828	fbxo18	99	39.825	ENSOARG00000012605	FBH1	83	39.978	Ovis_aries
ENSCVAG00000006828	fbxo18	99	40.556	ENSPPAG00000043946	FBH1	83	40.556	Pan_paniscus
ENSCVAG00000006828	fbxo18	99	40.264	ENSPPRG00000009687	FBH1	80	40.573	Panthera_pardus
ENSCVAG00000006828	fbxo18	99	40.419	ENSPTIG00000020396	FBH1	80	40.639	Panthera_tigris_altaica
ENSCVAG00000006828	fbxo18	99	40.444	ENSPTRG00000002261	FBH1	83	40.444	Pan_troglodytes
ENSCVAG00000006828	fbxo18	99	39.824	ENSPANG00000023427	FBH1	83	39.934	Papio_anubis
ENSCVAG00000006828	fbxo18	99	44.766	ENSPKIG00000025529	fbxo18	83	44.124	Paramormyrops_kingsleyae
ENSCVAG00000006828	fbxo18	99	38.571	ENSPSIG00000013802	FBH1	83	37.716	Pelodiscus_sinensis
ENSCVAG00000006828	fbxo18	99	38.639	ENSPEMG00000023309	Fbh1	83	39.824	Peromyscus_maniculatus_bairdii
ENSCVAG00000006828	fbxo18	99	39.735	ENSPCIG00000023460	FBH1	82	39.779	Phascolarctos_cinereus
ENSCVAG00000006828	fbxo18	99	77.928	ENSPFOG00000005889	fbxo18	83	78.153	Poecilia_formosa
ENSCVAG00000006828	fbxo18	99	78.579	ENSPLAG00000014934	fbxo18	83	78.805	Poecilia_latipinna
ENSCVAG00000006828	fbxo18	99	78.153	ENSPMEG00000021117	fbxo18	83	78.378	Poecilia_mexicana
ENSCVAG00000006828	fbxo18	76	73.488	ENSPREG00000017674	fbxo18	76	74.031	Poecilia_reticulata
ENSCVAG00000006828	fbxo18	99	39.759	ENSPPYG00000002064	FBH1	86	39.934	Pongo_abelii
ENSCVAG00000006828	fbxo18	99	36.031	ENSPCAG00000013584	FBH1	79	36.142	Procavia_capensis
ENSCVAG00000006828	fbxo18	99	39.198	ENSPCOG00000011617	FBH1	79	39.198	Propithecus_coquereli
ENSCVAG00000006828	fbxo18	99	40.549	ENSPVAG00000007082	FBH1	80	40.526	Pteropus_vampyrus
ENSCVAG00000006828	fbxo18	89	58.935	ENSPNYG00000015327	fbxo18	75	65.973	Pundamilia_nyererei
ENSCVAG00000006828	fbxo18	99	46.041	ENSPNAG00000008968	fbxo18	82	46.041	Pygocentrus_nattereri
ENSCVAG00000006828	fbxo18	75	36.992	ENSPNAG00000001339	-	74	37.220	Pygocentrus_nattereri
ENSCVAG00000006828	fbxo18	99	39.890	ENSRNOG00000018549	Fbh1	83	40.044	Rattus_norvegicus
ENSCVAG00000006828	fbxo18	99	39.714	ENSRBIG00000038238	FBH1	83	39.824	Rhinopithecus_bieti
ENSCVAG00000006828	fbxo18	99	39.824	ENSRROG00000029282	FBH1	80	39.934	Rhinopithecus_roxellana
ENSCVAG00000006828	fbxo18	99	39.934	ENSSBOG00000026129	FBH1	83	40.000	Saimiri_boliviensis_boliviensis
ENSCVAG00000006828	fbxo18	99	38.564	ENSSHAG00000009789	FBH1	65	43.521	Sarcophilus_harrisii
ENSCVAG00000006828	fbxo18	99	44.556	ENSSFOG00015023855	fbxo18	81	43.929	Scleropages_formosus
ENSCVAG00000006828	fbxo18	95	62.867	ENSSMAG00000012330	fbxo18	82	62.632	Scophthalmus_maximus
ENSCVAG00000006828	fbxo18	99	61.174	ENSSDUG00000014911	fbxo18	87	61.443	Seriola_dumerili
ENSCVAG00000006828	fbxo18	85	57.311	ENSSLDG00000014394	fbxo18	79	57.180	Seriola_lalandi_dorsalis
ENSCVAG00000006828	fbxo18	88	40.476	ENSSPUG00000001370	FBH1	95	39.065	Sphenodon_punctatus
ENSCVAG00000006828	fbxo18	99	66.298	ENSSPAG00000002282	fbxo18	84	66.077	Stegastes_partitus
ENSCVAG00000006828	fbxo18	78	44.650	ENSSSCG00000030030	FBH1	65	45.184	Sus_scrofa
ENSCVAG00000006828	fbxo18	54	44.694	ENSTGUG00000001932	FBH1	100	44.694	Taeniopygia_guttata
ENSCVAG00000006828	fbxo18	79	58.263	ENSTNIG00000006893	fbxo18	81	58.321	Tetraodon_nigroviridis
ENSCVAG00000006828	fbxo18	99	40.618	ENSTBEG00000003595	FBH1	80	40.949	Tupaia_belangeri
ENSCVAG00000006828	fbxo18	99	38.350	ENSTTRG00000001338	FBH1	63	42.979	Tursiops_truncatus
ENSCVAG00000006828	fbxo18	99	40.924	ENSUAMG00000007277	FBH1	83	41.254	Ursus_americanus
ENSCVAG00000006828	fbxo18	81	44.429	ENSUMAG00000012189	FBH1	70	45.467	Ursus_maritimus
ENSCVAG00000006828	fbxo18	99	40.243	ENSVVUG00000006823	FBH1	70	45.597	Vulpes_vulpes
ENSCVAG00000006828	fbxo18	99	39.145	ENSXETG00000018125	fbh1	82	38.692	Xenopus_tropicalis
ENSCVAG00000006828	fbxo18	99	78.104	ENSXMAG00000019200	fbxo18	83	78.330	Xiphophorus_maculatus