EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000006862 (Gene tree)
Gene ID: 107087626
Gene Symbol: si:ch211-107m4.1
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U like 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 6272 bases
Position: chrKL652510.1:2185930-2192201
Accession: 107087626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000023500	SAP	PF02037.27	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000006605	-	2791	XM_015379304	ENSCVAP00000023500	638 (aa)	XP_015234790	UPI000742BF90

Gene Model

Click here to download ENSCVAG00000006862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000006862	si:ch211-107m4.1	89	30.948	ENSCVAG00000004280	hnrnpub	86	30.972
ENSCVAG00000006862	si:ch211-107m4.1	71	38.280	ENSCVAG00000009524	-	73	35.395

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006862	si:ch211-107m4.1	68	42.955	ENSG00000214753	HNRNPUL2	68	39.695	Homo_sapiens
ENSCVAG00000006862	si:ch211-107m4.1	99	66.256	ENSAPOG00000005128	si:ch211-107m4.1	99	65.244	Acanthochromis_polyacanthus
ENSCVAG00000006862	si:ch211-107m4.1	96	58.833	ENSACIG00000022729	si:ch211-107m4.1	88	59.360	Amphilophus_citrinellus
ENSCVAG00000006862	si:ch211-107m4.1	99	61.898	ENSAOCG00000017297	si:ch211-107m4.1	99	61.252	Amphiprion_ocellaris
ENSCVAG00000006862	si:ch211-107m4.1	99	61.261	ENSAPEG00000009122	-	99	60.624	Amphiprion_percula
ENSCVAG00000006862	si:ch211-107m4.1	68	40.590	ENSACAG00000000746	-	56	38.889	Anolis_carolinensis
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSANAG00000027153	-	95	34.747	Aotus_nancymaae
ENSCVAG00000006862	si:ch211-107m4.1	100	62.384	ENSACLG00000018069	si:ch211-107m4.1	100	62.384	Astatotilapia_calliptera
ENSCVAG00000006862	si:ch211-107m4.1	99	58.140	ENSAMXG00000033712	si:ch211-107m4.1	84	58.140	Astyanax_mexicanus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.500	ENSBTAG00000002510	HNRNPUL2	95	35.027	Bos_taurus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSCJAG00000018709	-	95	34.789	Callithrix_jacchus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.955	ENSCAFG00000015686	-	68	39.695	Canis_familiaris
ENSCVAG00000006862	si:ch211-107m4.1	68	42.955	ENSCAFG00020013120	-	68	39.695	Canis_lupus_dingo
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSCHIG00000020213	-	95	35.165	Capra_hircus
ENSCVAG00000006862	si:ch211-107m4.1	68	40.371	ENSCCAG00000037674	-	95	33.241	Cebus_capucinus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSCATG00000034588	-	92	34.610	Cercocebus_atys
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSCSAG00000006701	-	92	34.610	Chlorocebus_sabaeus
ENSCVAG00000006862	si:ch211-107m4.1	67	42.825	ENSCPBG00000017963	-	67	39.539	Chrysemys_picta_bellii
ENSCVAG00000006862	si:ch211-107m4.1	68	42.273	ENSCGRG00001017076	Hnrnpul2	68	39.122	Cricetulus_griseus_chok1gshd
ENSCVAG00000006862	si:ch211-107m4.1	91	60.544	ENSCSEG00000005686	si:ch211-107m4.1	94	60.168	Cynoglossus_semilaevis
ENSCVAG00000006862	si:ch211-107m4.1	94	41.532	ENSDARG00000056830	si:ch211-107m4.1	94	41.507	Danio_rerio
ENSCVAG00000006862	si:ch211-107m4.1	68	42.273	ENSDNOG00000006508	-	95	34.431	Dasypus_novemcinctus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.273	ENSDORG00000008678	Hnrnpul2	95	34.711	Dipodomys_ordii
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSEASG00005011347	-	68	39.695	Equus_asinus_asinus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.500	ENSECAG00000020298	-	68	39.313	Equus_caballus
ENSCVAG00000006862	si:ch211-107m4.1	92	49.729	ENSELUG00000008134	si:ch211-107m4.1	92	43.072	Esox_lucius
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSFCAG00000014766	-	68	39.504	Felis_catus
ENSCVAG00000006862	si:ch211-107m4.1	97	75.641	ENSFHEG00000014731	si:ch211-107m4.1	100	75.641	Fundulus_heteroclitus
ENSCVAG00000006862	si:ch211-107m4.1	100	76.316	ENSGAFG00000016579	si:ch211-107m4.1	100	75.851	Gambusia_affinis
ENSCVAG00000006862	si:ch211-107m4.1	91	56.502	ENSGACG00000017006	si:ch211-107m4.1	99	55.573	Gasterosteus_aculeatus
ENSCVAG00000006862	si:ch211-107m4.1	67	42.825	ENSGAGG00000016818	-	65	39.539	Gopherus_agassizii
ENSCVAG00000006862	si:ch211-107m4.1	68	42.955	ENSGGOG00000011722	HNRNPUL2	68	39.695	Gorilla_gorilla
ENSCVAG00000006862	si:ch211-107m4.1	100	63.101	ENSHBUG00000013076	si:ch211-107m4.1	100	63.101	Haplochromis_burtoni
ENSCVAG00000006862	si:ch211-107m4.1	68	41.818	ENSHGLG00000003285	-	95	35.434	Heterocephalus_glaber_female
ENSCVAG00000006862	si:ch211-107m4.1	91	41.315	ENSIPUG00000009518	si:ch211-107m4.1	68	63.415	Ictalurus_punctatus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.500	ENSSTOG00000004327	-	95	34.801	Ictidomys_tridecemlineatus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.500	ENSJJAG00000011206	Hnrnpul2	95	35.157	Jaculus_jaculus
ENSCVAG00000006862	si:ch211-107m4.1	99	64.486	ENSKMAG00000003651	si:ch211-107m4.1	99	64.019	Kryptolebias_marmoratus
ENSCVAG00000006862	si:ch211-107m4.1	88	36.661	ENSLACG00000009304	-	96	35.310	Latimeria_chalumnae
ENSCVAG00000006862	si:ch211-107m4.1	68	43.182	ENSLAFG00000005377	-	68	39.885	Loxodonta_africana
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSMFAG00000041014	-	68	39.504	Macaca_fascicularis
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSMNEG00000036955	-	68	39.504	Macaca_nemestrina
ENSCVAG00000006862	si:ch211-107m4.1	99	60.643	ENSMAMG00000021489	si:ch211-107m4.1	99	60.337	Mastacembelus_armatus
ENSCVAG00000006862	si:ch211-107m4.1	100	62.384	ENSMZEG00005005136	si:ch211-107m4.1	100	62.384	Maylandia_zebra
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSMAUG00000013163	Hnrnpul2	68	39.504	Mesocricetus_auratus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSMICG00000009943	-	95	35.213	Microcebus_murinus
ENSCVAG00000006862	si:ch211-107m4.1	56	42.718	ENSMOCG00000020000	Hnrnpul2	56	41.339	Microtus_ochrogaster
ENSCVAG00000006862	si:ch211-107m4.1	86	66.112	ENSMALG00000011564	si:ch211-107m4.1	94	66.112	Monopterus_albus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.273	MGP_CAROLIEiJ_G0022656	Hnrnpul2	68	39.122	Mus_caroli
ENSCVAG00000006862	si:ch211-107m4.1	68	42.500	ENSMUSG00000071659	Hnrnpul2	68	39.313	Mus_musculus
ENSCVAG00000006862	si:ch211-107m4.1	67	42.597	MGP_PahariEiJ_G0014151	Hnrnpul2	68	39.313	Mus_pahari
ENSCVAG00000006862	si:ch211-107m4.1	68	42.500	MGP_SPRETEiJ_G0023569	Hnrnpul2	68	39.313	Mus_spretus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.500	ENSMPUG00000013707	-	67	39.313	Mustela_putorius_furo
ENSCVAG00000006862	si:ch211-107m4.1	68	43.409	ENSMLUG00000000412	-	67	40.077	Myotis_lucifugus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.500	ENSNGAG00000012005	Hnrnpul2	68	39.313	Nannospalax_galili
ENSCVAG00000006862	si:ch211-107m4.1	96	60.225	ENSNBRG00000000429	si:ch211-107m4.1	90	60.225	Neolamprologus_brichardi
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSNLEG00000004077	-	68	39.504	Nomascus_leucogenys
ENSCVAG00000006862	si:ch211-107m4.1	97	62.362	ENSONIG00000005422	si:ch211-107m4.1	100	62.058	Oreochromis_niloticus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSOCUG00000009474	-	82	36.508	Oryctolagus_cuniculus
ENSCVAG00000006862	si:ch211-107m4.1	98	61.538	ENSORLG00000024574	si:ch211-107m4.1	98	62.219	Oryzias_latipes
ENSCVAG00000006862	si:ch211-107m4.1	98	61.807	ENSOMEG00000018153	si:ch211-107m4.1	99	61.094	Oryzias_melastigma
ENSCVAG00000006862	si:ch211-107m4.1	67	42.273	ENSOGAG00000003302	-	65	40.552	Otolemur_garnettii
ENSCVAG00000006862	si:ch211-107m4.1	68	42.955	ENSOARG00000016817	-	96	35.302	Ovis_aries
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSPPRG00000006380	-	68	39.504	Panthera_pardus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.955	ENSPTRG00000034359	HNRNPUL2	68	39.695	Pan_troglodytes
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSPANG00000023745	-	92	34.610	Papio_anubis
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSPEMG00000015546	Hnrnpul2	68	39.504	Peromyscus_maniculatus_bairdii
ENSCVAG00000006862	si:ch211-107m4.1	67	43.807	ENSPCIG00000015254	-	51	40.535	Phascolarctos_cinereus
ENSCVAG00000006862	si:ch211-107m4.1	88	76.389	ENSPFOG00000008050	si:ch211-107m4.1	100	76.430	Poecilia_formosa
ENSCVAG00000006862	si:ch211-107m4.1	100	76.434	ENSPLAG00000003485	si:ch211-107m4.1	100	76.471	Poecilia_latipinna
ENSCVAG00000006862	si:ch211-107m4.1	100	76.589	ENSPMEG00000005490	si:ch211-107m4.1	100	76.625	Poecilia_mexicana
ENSCVAG00000006862	si:ch211-107m4.1	100	74.540	ENSPREG00000014973	si:ch211-107m4.1	100	74.693	Poecilia_reticulata
ENSCVAG00000006862	si:ch211-107m4.1	68	42.500	ENSPCAG00000010016	-	82	36.783	Procavia_capensis
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSPCOG00000013502	-	68	39.695	Propithecus_coquereli
ENSCVAG00000006862	si:ch211-107m4.1	82	38.374	ENSPVAG00000003475	-	68	39.122	Pteropus_vampyrus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.500	ENSRNOG00000019507	Hnrnpul2	68	39.313	Rattus_norvegicus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSRBIG00000037820	-	68	39.504	Rhinopithecus_bieti
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSRROG00000036561	-	68	39.504	Rhinopithecus_roxellana
ENSCVAG00000006862	si:ch211-107m4.1	88	47.959	ENSSFOG00015006544	si:ch211-107m4.1	64	66.667	Scleropages_formosus
ENSCVAG00000006862	si:ch211-107m4.1	99	62.208	ENSSMAG00000017226	si:ch211-107m4.1	99	63.124	Scophthalmus_maximus
ENSCVAG00000006862	si:ch211-107m4.1	99	66.063	ENSSPAG00000006972	si:ch211-107m4.1	99	65.611	Stegastes_partitus
ENSCVAG00000006862	si:ch211-107m4.1	78	39.412	ENSSSCG00000028542	-	89	34.825	Sus_scrofa
ENSCVAG00000006862	si:ch211-107m4.1	99	51.497	ENSTRUG00000012843	si:ch211-107m4.1	99	51.347	Takifugu_rubripes
ENSCVAG00000006862	si:ch211-107m4.1	89	54.833	ENSTNIG00000000741	si:ch211-107m4.1	100	55.387	Tetraodon_nigroviridis
ENSCVAG00000006862	si:ch211-107m4.1	53	43.636	ENSTTRG00000002475	-	83	37.121	Tursiops_truncatus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.500	ENSUAMG00000025971	-	68	39.313	Ursus_americanus
ENSCVAG00000006862	si:ch211-107m4.1	68	42.727	ENSVVUG00000029847	-	68	39.504	Vulpes_vulpes
ENSCVAG00000006862	si:ch211-107m4.1	69	40.889	ENSXETG00000006015	hnrnpul2	91	33.527	Xenopus_tropicalis
ENSCVAG00000006862	si:ch211-107m4.1	100	76.361	ENSXMAG00000003224	si:ch211-107m4.1	100	76.242	Xiphophorus_maculatus