EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000006882 (Gene tree)
Gene ID: 107087699
Gene Symbol: rbfox3b
Alias: rbfox3l|si:ch73-322f21.1
Full Name: RNA binding fox-1 homolog 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 544346 bases
Position: chrKL652691.1:89842-634187
Accession: 107087699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000023498	Fox-1_C	PF12414.8	5e-43	1	1
ENSCVAP00000023498	RRM_1	PF00076.22	1.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000006579	-	1352	XM_015379413	ENSCVAP00000023498	367 (aa)	XP_015234899	UPI000B8FE5EF

Gene Model

Click here to download ENSCVAG00000006882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000006882	rbfox3b	59	60.669	ENSCVAG00000016503	-	96	48.760
ENSCVAG00000006882	rbfox3b	78	61.000	ENSCVAG00000007986	rbfox1l	85	59.146
ENSCVAG00000006882	rbfox3b	53	62.780	ENSCVAG00000004491	rbfox2	100	64.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000006882	rbfox3b	81	80.000	ENSG00000167281	RBFOX3	100	82.803	Homo_sapiens
ENSCVAG00000006882	rbfox3b	88	68.923	ENSAPOG00000015658	-	84	69.846	Acanthochromis_polyacanthus
ENSCVAG00000006882	rbfox3b	100	100.000	ENSAPOG00000021630	rbfox3b	96	100.000	Acanthochromis_polyacanthus
ENSCVAG00000006882	rbfox3b	89	75.862	ENSAMEG00000014170	RBFOX3	88	77.810	Ailuropoda_melanoleuca
ENSCVAG00000006882	rbfox3b	84	70.859	ENSACIG00000003768	-	90	71.166	Amphilophus_citrinellus
ENSCVAG00000006882	rbfox3b	85	95.192	ENSACIG00000010817	rbfox3b	99	95.192	Amphilophus_citrinellus
ENSCVAG00000006882	rbfox3b	98	74.167	ENSAOCG00000010786	-	94	75.000	Amphiprion_ocellaris
ENSCVAG00000006882	rbfox3b	100	100.000	ENSAOCG00000012358	rbfox3b	100	100.000	Amphiprion_ocellaris
ENSCVAG00000006882	rbfox3b	88	74.928	ENSAPEG00000015891	-	87	74.716	Amphiprion_percula
ENSCVAG00000006882	rbfox3b	98	83.008	ENSAPEG00000019081	rbfox3b	96	83.008	Amphiprion_percula
ENSCVAG00000006882	rbfox3b	85	89.474	ENSATEG00000019945	rbfox3b	99	89.474	Anabas_testudineus
ENSCVAG00000006882	rbfox3b	81	79.000	ENSATEG00000023101	-	96	79.365	Anabas_testudineus
ENSCVAG00000006882	rbfox3b	89	80.363	ENSACAG00000016093	RBFOX3	99	77.008	Anolis_carolinensis
ENSCVAG00000006882	rbfox3b	81	79.667	ENSANAG00000023457	RBFOX3	100	82.484	Aotus_nancymaae
ENSCVAG00000006882	rbfox3b	98	76.389	ENSACLG00000025552	-	97	77.222	Astatotilapia_calliptera
ENSCVAG00000006882	rbfox3b	100	98.913	ENSACLG00000020011	rbfox3b	100	98.722	Astatotilapia_calliptera
ENSCVAG00000006882	rbfox3b	99	82.114	ENSAMXG00000042841	rbfox3b	94	86.322	Astyanax_mexicanus
ENSCVAG00000006882	rbfox3b	100	83.554	ENSAMXG00000037246	rbfox3a	98	85.714	Astyanax_mexicanus
ENSCVAG00000006882	rbfox3b	69	81.961	ENSBTAG00000006280	RBFOX3	100	63.712	Bos_taurus
ENSCVAG00000006882	rbfox3b	81	74.916	ENSCJAG00000009563	RBFOX3	100	72.022	Callithrix_jacchus
ENSCVAG00000006882	rbfox3b	65	84.583	ENSCAFG00000005547	RBFOX3	85	87.448	Canis_familiaris
ENSCVAG00000006882	rbfox3b	81	68.208	ENSCAFG00020008126	RBFOX3	96	71.745	Canis_lupus_dingo
ENSCVAG00000006882	rbfox3b	81	68.012	ENSCHIG00000009124	RBFOX3	96	71.745	Capra_hircus
ENSCVAG00000006882	rbfox3b	81	68.588	ENSTSYG00000029617	RBFOX3	100	72.376	Carlito_syrichta
ENSCVAG00000006882	rbfox3b	81	69.429	ENSCPOG00000021703	RBFOX3	100	71.154	Cavia_porcellus
ENSCVAG00000006882	rbfox3b	81	79.667	ENSCCAG00000028450	RBFOX3	100	82.484	Cebus_capucinus
ENSCVAG00000006882	rbfox3b	81	80.000	ENSCATG00000018349	RBFOX3	100	82.803	Cercocebus_atys
ENSCVAG00000006882	rbfox3b	81	69.828	ENSCLAG00000006449	RBFOX3	100	71.547	Chinchilla_lanigera
ENSCVAG00000006882	rbfox3b	81	80.000	ENSCSAG00000002355	RBFOX3	100	82.803	Chlorocebus_sabaeus
ENSCVAG00000006882	rbfox3b	88	83.951	ENSCPBG00000010904	RBFOX3	100	83.706	Chrysemys_picta_bellii
ENSCVAG00000006882	rbfox3b	81	80.000	ENSCANG00000043120	RBFOX3	100	82.803	Colobus_angolensis_palliatus
ENSCVAG00000006882	rbfox3b	81	68.103	ENSCGRG00001019476	Rbfox3	100	71.625	Cricetulus_griseus_chok1gshd
ENSCVAG00000006882	rbfox3b	81	68.103	ENSCGRG00000003268	Rbfox3	100	71.625	Cricetulus_griseus_crigri
ENSCVAG00000006882	rbfox3b	96	71.309	ENSCSEG00000020606	RBFOX3	97	70.474	Cynoglossus_semilaevis
ENSCVAG00000006882	rbfox3b	99	80.163	ENSCSEG00000015567	RBFOX3	97	80.978	Cynoglossus_semilaevis
ENSCVAG00000006882	rbfox3b	85	78.594	ENSDARG00000074310	rbfox3b	96	79.730	Danio_rerio
ENSCVAG00000006882	rbfox3b	100	83.554	ENSDARG00000010083	rbfox3a	99	86.322	Danio_rerio
ENSCVAG00000006882	rbfox3b	66	68.621	ENSDNOG00000039391	RBFOX3	96	60.000	Dasypus_novemcinctus
ENSCVAG00000006882	rbfox3b	81	63.663	ENSDORG00000005352	Rbfox3	100	63.231	Dipodomys_ordii
ENSCVAG00000006882	rbfox3b	88	68.142	ENSEBUG00000002129	RBFOX3	95	69.027	Eptatretus_burgeri
ENSCVAG00000006882	rbfox3b	75	56.794	ENSEBUG00000013559	RBFOX3	88	53.651	Eptatretus_burgeri
ENSCVAG00000006882	rbfox3b	81	80.132	ENSEASG00005005059	RBFOX3	100	82.278	Equus_asinus_asinus
ENSCVAG00000006882	rbfox3b	81	79.801	ENSECAG00000023811	RBFOX3	100	81.962	Equus_caballus
ENSCVAG00000006882	rbfox3b	71	76.056	ENSEEUG00000013974	RBFOX3	72	86.885	Erinaceus_europaeus
ENSCVAG00000006882	rbfox3b	100	94.823	ENSELUG00000017963	rbfox3b	100	94.823	Esox_lucius
ENSCVAG00000006882	rbfox3b	52	63.776	ENSELUG00000009807	-	64	55.357	Esox_lucius
ENSCVAG00000006882	rbfox3b	89	78.852	ENSFCAG00000002555	RBFOX3	100	81.847	Felis_catus
ENSCVAG00000006882	rbfox3b	90	68.132	ENSFALG00000012288	RBFOX3	89	68.595	Ficedula_albicollis
ENSCVAG00000006882	rbfox3b	81	64.000	ENSFDAG00000007489	RBFOX3	100	65.934	Fukomys_damarensis
ENSCVAG00000006882	rbfox3b	85	89.744	ENSFHEG00000008550	rbfox3b	100	89.744	Fundulus_heteroclitus
ENSCVAG00000006882	rbfox3b	85	67.778	ENSGMOG00000019304	-	96	68.611	Gadus_morhua
ENSCVAG00000006882	rbfox3b	98	76.667	ENSGALG00000032889	RBFOX3	99	78.552	Gallus_gallus
ENSCVAG00000006882	rbfox3b	100	92.643	ENSGAFG00000005025	rbfox3b	100	92.643	Gambusia_affinis
ENSCVAG00000006882	rbfox3b	81	69.628	ENSGACG00000002138	-	96	71.703	Gasterosteus_aculeatus
ENSCVAG00000006882	rbfox3b	98	77.716	ENSGAGG00000020025	RBFOX3	100	83.706	Gopherus_agassizii
ENSCVAG00000006882	rbfox3b	81	80.000	ENSGGOG00000012546	RBFOX3	100	82.803	Gorilla_gorilla
ENSCVAG00000006882	rbfox3b	90	81.024	ENSHBUG00000023098	-	95	81.928	Haplochromis_burtoni
ENSCVAG00000006882	rbfox3b	100	99.183	ENSHBUG00000018099	rbfox3b	100	99.183	Haplochromis_burtoni
ENSCVAG00000006882	rbfox3b	81	68.750	ENSHGLG00000008679	RBFOX3	100	70.219	Heterocephalus_glaber_female
ENSCVAG00000006882	rbfox3b	81	65.625	ENSHGLG00100014739	RBFOX3	96	67.213	Heterocephalus_glaber_male
ENSCVAG00000006882	rbfox3b	85	74.038	ENSHCOG00000001863	RBFOX3	92	74.841	Hippocampus_comes
ENSCVAG00000006882	rbfox3b	98	80.055	ENSHCOG00000007444	RBFOX3	93	81.644	Hippocampus_comes
ENSCVAG00000006882	rbfox3b	85	73.837	ENSIPUG00000021966	rbfox3b	98	85.985	Ictalurus_punctatus
ENSCVAG00000006882	rbfox3b	100	81.963	ENSIPUG00000012010	rbfox3a	100	83.820	Ictalurus_punctatus
ENSCVAG00000006882	rbfox3b	81	63.816	ENSSTOG00000026817	RBFOX3	100	65.938	Ictidomys_tridecemlineatus
ENSCVAG00000006882	rbfox3b	81	67.147	ENSJJAG00000014167	Rbfox3	100	71.745	Jaculus_jaculus
ENSCVAG00000006882	rbfox3b	100	100.000	ENSKMAG00000006726	rbfox3b	100	100.000	Kryptolebias_marmoratus
ENSCVAG00000006882	rbfox3b	100	84.450	ENSLBEG00000022508	-	97	80.278	Labrus_bergylta
ENSCVAG00000006882	rbfox3b	98	91.643	ENSLBEG00000004030	rbfox3b	99	94.872	Labrus_bergylta
ENSCVAG00000006882	rbfox3b	88	71.549	ENSLACG00000018409	-	90	72.958	Latimeria_chalumnae
ENSCVAG00000006882	rbfox3b	88	88.650	ENSLOCG00000012267	rbfox3a	98	90.184	Lepisosteus_oculatus
ENSCVAG00000006882	rbfox3b	89	73.743	ENSLAFG00000016623	RBFOX3	96	71.468	Loxodonta_africana
ENSCVAG00000006882	rbfox3b	81	68.497	ENSMFAG00000002247	RBFOX3	100	72.299	Macaca_fascicularis
ENSCVAG00000006882	rbfox3b	81	80.000	ENSMMUG00000023028	RBFOX3	100	82.803	Macaca_mulatta
ENSCVAG00000006882	rbfox3b	81	79.667	ENSMNEG00000041147	RBFOX3	100	82.484	Macaca_nemestrina
ENSCVAG00000006882	rbfox3b	81	80.000	ENSMLEG00000025686	RBFOX3	100	82.803	Mandrillus_leucophaeus
ENSCVAG00000006882	rbfox3b	85	88.782	ENSMAMG00000019810	rbfox3b	99	87.821	Mastacembelus_armatus
ENSCVAG00000006882	rbfox3b	88	80.615	ENSMAMG00000020600	-	93	80.308	Mastacembelus_armatus
ENSCVAG00000006882	rbfox3b	83	62.500	ENSMZEG00005003055	-	80	62.798	Maylandia_zebra
ENSCVAG00000006882	rbfox3b	100	99.183	ENSMZEG00005000781	rbfox3b	96	99.183	Maylandia_zebra
ENSCVAG00000006882	rbfox3b	60	80.909	ENSMGAG00000005600	RBFOX3	83	81.279	Meleagris_gallopavo
ENSCVAG00000006882	rbfox3b	81	69.452	ENSMAUG00000013543	Rbfox3	100	70.248	Mesocricetus_auratus
ENSCVAG00000006882	rbfox3b	88	81.288	ENSMICG00000014898	RBFOX3	100	81.789	Microcebus_murinus
ENSCVAG00000006882	rbfox3b	81	67.147	ENSMOCG00000015373	Rbfox3	100	70.718	Microtus_ochrogaster
ENSCVAG00000006882	rbfox3b	100	97.290	ENSMMOG00000020193	rbfox3b	100	97.290	Mola_mola
ENSCVAG00000006882	rbfox3b	89	79.697	ENSMODG00000002089	RBFOX3	92	81.763	Monodelphis_domestica
ENSCVAG00000006882	rbfox3b	100	81.989	ENSMALG00000018270	-	96	82.796	Monopterus_albus
ENSCVAG00000006882	rbfox3b	100	98.093	ENSMALG00000020407	rbfox3b	100	98.093	Monopterus_albus
ENSCVAG00000006882	rbfox3b	81	78.667	MGP_CAROLIEiJ_G0017487	Rbfox3	96	89.209	Mus_caroli
ENSCVAG00000006882	rbfox3b	81	80.399	ENSMUSG00000025576	Rbfox3	96	89.209	Mus_musculus
ENSCVAG00000006882	rbfox3b	81	79.402	MGP_PahariEiJ_G0018614	Rbfox3	96	89.928	Mus_pahari
ENSCVAG00000006882	rbfox3b	81	79.000	MGP_SPRETEiJ_G0018331	Rbfox3	96	89.209	Mus_spretus
ENSCVAG00000006882	rbfox3b	89	71.662	ENSMPUG00000012319	RBFOX3	95	73.497	Mustela_putorius_furo
ENSCVAG00000006882	rbfox3b	81	68.103	ENSNGAG00000018006	Rbfox3	100	71.823	Nannospalax_galili
ENSCVAG00000006882	rbfox3b	90	75.758	ENSNBRG00000022885	-	91	75.602	Neolamprologus_brichardi
ENSCVAG00000006882	rbfox3b	100	98.093	ENSNBRG00000010102	rbfox3b	100	98.093	Neolamprologus_brichardi
ENSCVAG00000006882	rbfox3b	85	56.051	ENSNLEG00000000153	-	95	56.230	Nomascus_leucogenys
ENSCVAG00000006882	rbfox3b	81	51.884	ENSMEUG00000004218	-	100	53.889	Notamacropus_eugenii
ENSCVAG00000006882	rbfox3b	68	76.963	ENSOPRG00000016279	-	71	81.667	Ochotona_princeps
ENSCVAG00000006882	rbfox3b	81	81.728	ENSODEG00000009433	RBFOX3	100	82.222	Octodon_degus
ENSCVAG00000006882	rbfox3b	100	99.728	ENSONIG00000009549	rbfox3b	100	99.728	Oreochromis_niloticus
ENSCVAG00000006882	rbfox3b	92	79.646	ENSONIG00000007282	-	99	80.531	Oreochromis_niloticus
ENSCVAG00000006882	rbfox3b	60	65.660	ENSOCUG00000014217	RBFOX3	77	62.989	Oryctolagus_cuniculus
ENSCVAG00000006882	rbfox3b	100	98.638	ENSORLG00000000905	rbfox3b	69	98.611	Oryzias_latipes
ENSCVAG00000006882	rbfox3b	100	98.638	ENSORLG00020018030	rbfox3b	100	94.271	Oryzias_latipes_hni
ENSCVAG00000006882	rbfox3b	100	98.910	ENSORLG00015009200	rbfox3b	100	98.910	Oryzias_latipes_hsok
ENSCVAG00000006882	rbfox3b	85	92.705	ENSOMEG00000014677	rbfox3b	86	92.705	Oryzias_melastigma
ENSCVAG00000006882	rbfox3b	88	79.938	ENSOGAG00000029595	RBFOX3	86	82.099	Otolemur_garnettii
ENSCVAG00000006882	rbfox3b	87	59.195	ENSOARG00000002908	RBFOX3	89	59.544	Ovis_aries
ENSCVAG00000006882	rbfox3b	69	81.961	ENSPPAG00000025383	RBFOX3	99	81.882	Pan_paniscus
ENSCVAG00000006882	rbfox3b	81	67.647	ENSPPRG00000007819	RBFOX3	100	72.394	Panthera_pardus
ENSCVAG00000006882	rbfox3b	81	80.000	ENSPTRG00000009727	RBFOX3	100	82.803	Pan_troglodytes
ENSCVAG00000006882	rbfox3b	81	80.000	ENSPANG00000019837	RBFOX3	100	82.803	Papio_anubis
ENSCVAG00000006882	rbfox3b	88	71.472	ENSPKIG00000022633	-	90	69.369	Paramormyrops_kingsleyae
ENSCVAG00000006882	rbfox3b	100	88.235	ENSPKIG00000010299	rbfox3a	99	88.439	Paramormyrops_kingsleyae
ENSCVAG00000006882	rbfox3b	85	85.350	ENSPMGG00000008000	rbfox3b	97	85.350	Periophthalmus_magnuspinnatus
ENSCVAG00000006882	rbfox3b	81	67.723	ENSPEMG00000010500	Rbfox3	100	71.271	Peromyscus_maniculatus_bairdii
ENSCVAG00000006882	rbfox3b	89	70.292	ENSPCIG00000005766	RBFOX3	100	73.482	Phascolarctos_cinereus
ENSCVAG00000006882	rbfox3b	100	100.000	ENSPFOG00000018294	rbfox3b	96	100.000	Poecilia_formosa
ENSCVAG00000006882	rbfox3b	65	94.142	ENSPLAG00000000481	rbfox3b	73	94.118	Poecilia_latipinna
ENSCVAG00000006882	rbfox3b	85	90.064	ENSPMEG00000022997	rbfox3b	100	90.064	Poecilia_mexicana
ENSCVAG00000006882	rbfox3b	100	99.457	ENSPREG00000012886	rbfox3b	99	99.457	Poecilia_reticulata
ENSCVAG00000006882	rbfox3b	76	76.071	ENSPPYG00000008704	RBFOX3	87	75.758	Pongo_abelii
ENSCVAG00000006882	rbfox3b	81	65.318	ENSPCAG00000001401	RBFOX3	100	65.097	Procavia_capensis
ENSCVAG00000006882	rbfox3b	85	68.698	ENSPCOG00000012689	RBFOX3	100	71.468	Propithecus_coquereli
ENSCVAG00000006882	rbfox3b	81	59.366	ENSPVAG00000015243	RBFOX3	100	63.812	Pteropus_vampyrus
ENSCVAG00000006882	rbfox3b	98	76.389	ENSPNYG00000009079	-	93	76.243	Pundamilia_nyererei
ENSCVAG00000006882	rbfox3b	98	78.947	ENSPNYG00000010414	rbfox3b	96	77.716	Pundamilia_nyererei
ENSCVAG00000006882	rbfox3b	100	83.820	ENSPNAG00000002889	rbfox3a	100	85.411	Pygocentrus_nattereri
ENSCVAG00000006882	rbfox3b	85	71.154	ENSPNAG00000018173	rbfox3b	90	71.154	Pygocentrus_nattereri
ENSCVAG00000006882	rbfox3b	81	79.402	ENSRNOG00000003386	Rbfox3	100	81.962	Rattus_norvegicus
ENSCVAG00000006882	rbfox3b	89	79.154	ENSRBIG00000040449	RBFOX3	92	81.212	Rhinopithecus_bieti
ENSCVAG00000006882	rbfox3b	81	80.000	ENSRROG00000000766	RBFOX3	100	82.803	Rhinopithecus_roxellana
ENSCVAG00000006882	rbfox3b	81	79.667	ENSSBOG00000031591	RBFOX3	100	82.484	Saimiri_boliviensis_boliviensis
ENSCVAG00000006882	rbfox3b	88	74.790	ENSSHAG00000016076	RBFOX3	100	73.482	Sarcophilus_harrisii
ENSCVAG00000006882	rbfox3b	97	70.330	ENSSFOG00015004716	RBFOX3	99	70.055	Scleropages_formosus
ENSCVAG00000006882	rbfox3b	100	86.631	ENSSFOG00015023260	rbfox3a	100	87.968	Scleropages_formosus
ENSCVAG00000006882	rbfox3b	98	76.944	ENSSMAG00000019052	-	100	83.121	Scophthalmus_maximus
ENSCVAG00000006882	rbfox3b	100	95.052	ENSSMAG00000012618	rbfox3b	87	95.052	Scophthalmus_maximus
ENSCVAG00000006882	rbfox3b	97	77.159	ENSSDUG00000015801	-	96	77.994	Seriola_dumerili
ENSCVAG00000006882	rbfox3b	85	89.744	ENSSDUG00000023183	rbfox3b	100	89.744	Seriola_dumerili
ENSCVAG00000006882	rbfox3b	100	99.728	ENSSLDG00000000149	rbfox3b	100	99.728	Seriola_lalandi_dorsalis
ENSCVAG00000006882	rbfox3b	97	80.501	ENSSLDG00000016098	-	96	81.337	Seriola_lalandi_dorsalis
ENSCVAG00000006882	rbfox3b	81	83.389	ENSSPUG00000011733	RBFOX3	99	83.706	Sphenodon_punctatus
ENSCVAG00000006882	rbfox3b	74	77.574	ENSSPAG00000004898	-	85	78.049	Stegastes_partitus
ENSCVAG00000006882	rbfox3b	98	83.565	ENSSPAG00000017571	rbfox3b	96	83.565	Stegastes_partitus
ENSCVAG00000006882	rbfox3b	73	81.250	ENSSSCG00000039498	RBFOX3	96	70.755	Sus_scrofa
ENSCVAG00000006882	rbfox3b	89	89.458	ENSTRUG00000004894	rbfox3b	93	90.090	Takifugu_rubripes
ENSCVAG00000006882	rbfox3b	88	89.296	ENSTNIG00000011278	rbfox3b	89	89.296	Tetraodon_nigroviridis
ENSCVAG00000006882	rbfox3b	74	48.101	ENSTBEG00000004296	-	89	51.360	Tupaia_belangeri
ENSCVAG00000006882	rbfox3b	81	62.717	ENSTTRG00000003676	RBFOX3	100	66.759	Tursiops_truncatus
ENSCVAG00000006882	rbfox3b	81	80.000	ENSUAMG00000004668	RBFOX3	100	82.803	Ursus_americanus
ENSCVAG00000006882	rbfox3b	89	79.878	ENSVVUG00000017864	RBFOX3	100	82.484	Vulpes_vulpes
ENSCVAG00000006882	rbfox3b	88	67.147	ENSXETG00000020236	rbfox3	88	67.147	Xenopus_tropicalis
ENSCVAG00000006882	rbfox3b	98	98.061	ENSXCOG00000018262	rbfox3b	100	98.061	Xiphophorus_couchianus
ENSCVAG00000006882	rbfox3b	100	99.728	ENSXMAG00000012939	rbfox3b	100	99.728	Xiphophorus_maculatus