EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000006979 (Gene tree)
Gene ID
107087675
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
transcription activator BRG1
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
21027 bases
Position
chrKL652690.1:1218612-1239638
Accession
107087675
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000023515ResIIIPF04851.154.8e-0911
ENSCVAP00000023515BRKPF07533.161.4e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000006543-5102XM_015379372ENSCVAP000000235151614 (aa)XP_015234858-
Gene Model
Click here to download ENSCVAG00000006979's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000006979's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000006979smarca4a9983.416ENSCVAG00000003018-9883.478
ENSCVAG00000006979smarca4a6579.340ENSCVAG00000016571SMARCA29369.444
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000006979smarca4a9986.889ENSG00000127616SMARCA499100.000Homo_sapiens
ENSCVAG00000006979smarca4a9583.708ENSAPOG00000004542SMARCA49983.425Acanthochromis_polyacanthus
ENSCVAG00000006979smarca4a7691.987ENSAPOG00000003509smarca4a9989.333Acanthochromis_polyacanthus
ENSCVAG00000006979smarca4a9982.689ENSAMEG00000010868SMARCA49882.931Ailuropoda_melanoleuca
ENSCVAG00000006979smarca4a9583.700ENSACIG00000003035-9784.347Amphilophus_citrinellus
ENSCVAG00000006979smarca4a9994.331ENSACIG00000021550smarca4a9994.390Amphilophus_citrinellus
ENSCVAG00000006979smarca4a9089.795ENSAOCG00000019167smarca4a10089.658Amphiprion_ocellaris
ENSCVAG00000006979smarca4a9485.584ENSAOCG00000009450-9785.621Amphiprion_ocellaris
ENSCVAG00000006979smarca4a9089.863ENSAPEG00000015559smarca4a10089.726Amphiprion_percula
ENSCVAG00000006979smarca4a9983.363ENSAPEG00000023108-9881.925Amphiprion_percula
ENSCVAG00000006979smarca4a9984.015ENSATEG00000001094-9883.537Anabas_testudineus
ENSCVAG00000006979smarca4a9992.733ENSATEG00000011524smarca4a9992.671Anabas_testudineus
ENSCVAG00000006979smarca4a9986.712ENSANAG00000036991SMARCA49783.738Aotus_nancymaae
ENSCVAG00000006979smarca4a9584.451ENSACLG00000008638-9883.700Astatotilapia_calliptera
ENSCVAG00000006979smarca4a9993.571ENSACLG00000000163smarca4a9993.808Astatotilapia_calliptera
ENSCVAG00000006979smarca4a9884.915ENSAMXG00000021023smarca4a9885.309Astyanax_mexicanus
ENSCVAG00000006979smarca4a9486.207ENSAMXG00000011238-9486.336Astyanax_mexicanus
ENSCVAG00000006979smarca4a9987.081ENSBTAG00000019220SMARCA49587.145Bos_taurus
ENSCVAG00000006979smarca4a9982.769ENSCJAG00000005936SMARCA49289.627Callithrix_jacchus
ENSCVAG00000006979smarca4a9986.712ENSCAFG00000017584SMARCA49786.951Canis_familiaris
ENSCVAG00000006979smarca4a9986.712ENSCAFG00020024620SMARCA49686.951Canis_lupus_dingo
ENSCVAG00000006979smarca4a9983.065ENSCHIG00000015318SMARCA49583.097Capra_hircus
ENSCVAG00000006979smarca4a9987.251ENSTSYG00000012966SMARCA49787.327Carlito_syrichta
ENSCVAG00000006979smarca4a9480.762ENSCAPG00000015932SMARCA49589.697Cavia_aperea
ENSCVAG00000006979smarca4a9986.802ENSCPOG00000015549SMARCA49786.763Cavia_porcellus
ENSCVAG00000006979smarca4a9982.558ENSCCAG00000031660SMARCA49683.106Cebus_capucinus
ENSCVAG00000006979smarca4a9986.836ENSCATG00000029530SMARCA49787.014Cercocebus_atys
ENSCVAG00000006979smarca4a9987.057ENSCLAG00000011946SMARCA49787.264Chinchilla_lanigera
ENSCVAG00000006979smarca4a9987.091ENSCPBG00000009994SMARCA49986.704Chrysemys_picta_bellii
ENSCVAG00000006979smarca4a9986.774ENSCANG00000036013SMARCA49787.014Colobus_angolensis_palliatus
ENSCVAG00000006979smarca4a9986.712ENSCGRG00001016732Smarca49786.888Cricetulus_griseus_chok1gshd
ENSCVAG00000006979smarca4a9986.712ENSCGRG00000017242Smarca49786.888Cricetulus_griseus_crigri
ENSCVAG00000006979smarca4a9692.337ENSCSEG00000014771smarca4a9992.737Cynoglossus_semilaevis
ENSCVAG00000006979smarca4a9283.378ENSDARG00000104339SMARCA49483.400Danio_rerio
ENSCVAG00000006979smarca4a9889.606ENSDARG00000077226smarca4a9789.655Danio_rerio
ENSCVAG00000006979smarca4a9978.762ENSDNOG00000048847SMARCA49091.097Dasypus_novemcinctus
ENSCVAG00000006979smarca4a8581.476ENSDORG00000002544Smarca49379.690Dipodomys_ordii
ENSCVAG00000006979smarca4a9476.403ENSETEG00000013361SMARCA49475.479Echinops_telfairi
ENSCVAG00000006979smarca4a9986.696ENSEASG00005006167SMARCA49686.763Equus_asinus_asinus
ENSCVAG00000006979smarca4a9986.757ENSECAG00000008334SMARCA49886.826Equus_caballus
ENSCVAG00000006979smarca4a9989.183ENSELUG00000010247smarca4a9788.481Esox_lucius
ENSCVAG00000006979smarca4a10077.895ENSELUG00000023232-9976.785Esox_lucius
ENSCVAG00000006979smarca4a9986.675ENSFCAG00000004894SMARCA49786.850Felis_catus
ENSCVAG00000006979smarca4a7491.282ENSFALG00000004208SMARCA49284.264Ficedula_albicollis
ENSCVAG00000006979smarca4a9286.693ENSFDAG00000012237SMARCA49786.409Fukomys_damarensis
ENSCVAG00000006979smarca4a9984.453ENSFHEG00000007902-9883.251Fundulus_heteroclitus
ENSCVAG00000006979smarca4a9996.378ENSFHEG00000010182smarca4a9996.378Fundulus_heteroclitus
ENSCVAG00000006979smarca4a9180.017ENSGMOG00000005756-9079.331Gadus_morhua
ENSCVAG00000006979smarca4a8888.197ENSGMOG00000002649smarca4a9288.254Gadus_morhua
ENSCVAG00000006979smarca4a7486.058ENSGALG00000047145SMARCA410085.643Gallus_gallus
ENSCVAG00000006979smarca4a9980.311ENSGAFG00000008827-9880.498Gambusia_affinis
ENSCVAG00000006979smarca4a9196.005ENSGAFG00000014900smarca4a9996.005Gambusia_affinis
ENSCVAG00000006979smarca4a9979.424ENSGACG00000016033-9978.131Gasterosteus_aculeatus
ENSCVAG00000006979smarca4a9792.053ENSGACG00000006691smarca4a9991.868Gasterosteus_aculeatus
ENSCVAG00000006979smarca4a9987.314ENSGAGG00000016757SMARCA49986.927Gopherus_agassizii
ENSCVAG00000006979smarca4a9986.836ENSGGOG00000009882SMARCA49787.014Gorilla_gorilla
ENSCVAG00000006979smarca4a9994.227ENSHBUG00000021172smarca4a9994.041Haplochromis_burtoni
ENSCVAG00000006979smarca4a9984.742ENSHBUG00000005447-9983.455Haplochromis_burtoni
ENSCVAG00000006979smarca4a9986.137ENSHGLG00000010519SMARCA49786.321Heterocephalus_glaber_female
ENSCVAG00000006979smarca4a9985.785ENSHGLG00100013774SMARCA49785.786Heterocephalus_glaber_male
ENSCVAG00000006979smarca4a9592.452ENSHCOG00000009510smarca4a9692.452Hippocampus_comes
ENSCVAG00000006979smarca4a9784.557ENSIPUG00000016346-9484.720Ictalurus_punctatus
ENSCVAG00000006979smarca4a9989.006ENSIPUG00000006107smarca4a9989.350Ictalurus_punctatus
ENSCVAG00000006979smarca4a9986.634ENSSTOG00000007939SMARCA49786.763Ictidomys_tridecemlineatus
ENSCVAG00000006979smarca4a9985.039ENSJJAG00000012877Smarca49784.573Jaculus_jaculus
ENSCVAG00000006979smarca4a9585.889ENSKMAG00000019518-9885.539Kryptolebias_marmoratus
ENSCVAG00000006979smarca4a9995.000ENSKMAG00000011931smarca4a9995.000Kryptolebias_marmoratus
ENSCVAG00000006979smarca4a9972.461ENSLBEG00000020655-9871.667Labrus_bergylta
ENSCVAG00000006979smarca4a9589.168ENSLBEG00000017383smarca4a9788.368Labrus_bergylta
ENSCVAG00000006979smarca4a5281.669ENSLACG00000015309SMARCA410080.376Latimeria_chalumnae
ENSCVAG00000006979smarca4a9985.945ENSLOCG00000007820smarca4a9985.511Lepisosteus_oculatus
ENSCVAG00000006979smarca4a9986.798ENSLAFG00000001433SMARCA49786.913Loxodonta_africana
ENSCVAG00000006979smarca4a9986.836ENSMFAG00000032146SMARCA49687.014Macaca_fascicularis
ENSCVAG00000006979smarca4a9986.941ENSMMUG00000012042SMARCA49592.121Macaca_mulatta
ENSCVAG00000006979smarca4a9986.819ENSMNEG00000028512SMARCA49786.997Macaca_nemestrina
ENSCVAG00000006979smarca4a9986.836ENSMLEG00000034976SMARCA49786.788Mandrillus_leucophaeus
ENSCVAG00000006979smarca4a9993.727ENSMAMG00000009256smarca4a9993.727Mastacembelus_armatus
ENSCVAG00000006979smarca4a9982.981ENSMAMG00000002841-9886.176Mastacembelus_armatus
ENSCVAG00000006979smarca4a9585.038ENSMZEG00005023861-9883.702Maylandia_zebra
ENSCVAG00000006979smarca4a9994.107ENSMZEG00005003889smarca4a9993.921Maylandia_zebra
ENSCVAG00000006979smarca4a9986.490ENSMAUG00000020731Smarca49786.600Mesocricetus_auratus
ENSCVAG00000006979smarca4a9986.613ENSMICG00000009806SMARCA49786.788Microcebus_murinus
ENSCVAG00000006979smarca4a9986.305ENSMOCG00000022209Smarca49786.475Microtus_ochrogaster
ENSCVAG00000006979smarca4a9981.638ENSMMOG00000008466-9881.207Mola_mola
ENSCVAG00000006979smarca4a9591.414ENSMMOG00000007571smarca4a9890.891Mola_mola
ENSCVAG00000006979smarca4a9985.818ENSMODG00000006287SMARCA49984.830Monodelphis_domestica
ENSCVAG00000006979smarca4a9693.243ENSMALG00000003388smarca4a9993.176Monopterus_albus
ENSCVAG00000006979smarca4a9083.012ENSMALG00000021534-9682.097Monopterus_albus
ENSCVAG00000006979smarca4a9986.642MGP_CAROLIEiJ_G0031879Smarca410085.816Mus_caroli
ENSCVAG00000006979smarca4a9986.642ENSMUSG00000032187Smarca49985.816Mus_musculus
ENSCVAG00000006979smarca4a9987.089MGP_PahariEiJ_G0014745Smarca410086.144Mus_pahari
ENSCVAG00000006979smarca4a9986.642MGP_SPRETEiJ_G0033003Smarca410085.816Mus_spretus
ENSCVAG00000006979smarca4a9986.774ENSMPUG00000005711SMARCA49786.951Mustela_putorius_furo
ENSCVAG00000006979smarca4a9987.021ENSMLUG00000004491-9786.951Myotis_lucifugus
ENSCVAG00000006979smarca4a9986.787ENSNGAG00000021852Smarca49786.855Nannospalax_galili
ENSCVAG00000006979smarca4a9083.780ENSNBRG00000018865-9984.124Neolamprologus_brichardi
ENSCVAG00000006979smarca4a9589.929ENSNBRG00000011457smarca4a9690.058Neolamprologus_brichardi
ENSCVAG00000006979smarca4a9684.231ENSNLEG00000012389SMARCA49483.977Nomascus_leucogenys
ENSCVAG00000006979smarca4a8093.103ENSOPRG00000000885-7893.103Ochotona_princeps
ENSCVAG00000006979smarca4a9984.535ENSODEG00000017127SMARCA49784.168Octodon_degus
ENSCVAG00000006979smarca4a9994.103ENSONIG00000008196smarca4a9993.979Oreochromis_niloticus
ENSCVAG00000006979smarca4a9984.681ENSONIG00000018040-9983.394Oreochromis_niloticus
ENSCVAG00000006979smarca4a9980.881ENSOCUG00000001787SMARCA49880.605Oryctolagus_cuniculus
ENSCVAG00000006979smarca4a9993.504ENSORLG00000015452smarca4a9993.192Oryzias_latipes
ENSCVAG00000006979smarca4a9683.942ENSORLG00000003955-9583.670Oryzias_latipes
ENSCVAG00000006979smarca4a9683.889ENSORLG00020009728-9583.302Oryzias_latipes_hni
ENSCVAG00000006979smarca4a9993.129ENSORLG00020004611smarca4a9993.192Oryzias_latipes_hni
ENSCVAG00000006979smarca4a9993.192ENSORLG00015016560smarca4a9993.254Oryzias_latipes_hsok
ENSCVAG00000006979smarca4a9983.647ENSORLG00015007739-9583.291Oryzias_latipes_hsok
ENSCVAG00000006979smarca4a9684.078ENSOMEG00000016626-9583.617Oryzias_melastigma
ENSCVAG00000006979smarca4a9993.625ENSOMEG00000007486smarca4a9993.625Oryzias_melastigma
ENSCVAG00000006979smarca4a9085.432ENSOGAG00000016148SMARCA410084.867Otolemur_garnettii
ENSCVAG00000006979smarca4a9986.530ENSOARG00000017454SMARCA49687.080Ovis_aries
ENSCVAG00000006979smarca4a9986.836ENSPPAG00000043191SMARCA49787.014Pan_paniscus
ENSCVAG00000006979smarca4a9986.675ENSPPRG00000000064SMARCA49786.850Panthera_pardus
ENSCVAG00000006979smarca4a7986.284ENSPTIG00000017447SMARCA49780.911Panthera_tigris_altaica
ENSCVAG00000006979smarca4a9986.836ENSPTRG00000010488SMARCA49787.014Pan_troglodytes
ENSCVAG00000006979smarca4a9986.943ENSPANG00000011042SMARCA49687.123Papio_anubis
ENSCVAG00000006979smarca4a9988.662ENSPKIG00000007770SMARCA49988.717Paramormyrops_kingsleyae
ENSCVAG00000006979smarca4a9985.572ENSPKIG00000010087-9785.541Paramormyrops_kingsleyae
ENSCVAG00000006979smarca4a9981.961ENSPSIG00000005547SMARCA49981.311Pelodiscus_sinensis
ENSCVAG00000006979smarca4a9986.366ENSPEMG00000020389Smarca49786.537Peromyscus_maniculatus_bairdii
ENSCVAG00000006979smarca4a9987.577ENSPCIG00000017138SMARCA49987.129Phascolarctos_cinereus
ENSCVAG00000006979smarca4a9995.946ENSPFOG00000007892smarca4a9995.946Poecilia_formosa
ENSCVAG00000006979smarca4a9983.656ENSPFOG00000012930-9980.762Poecilia_formosa
ENSCVAG00000006979smarca4a9985.411ENSPLAG00000018616-9885.137Poecilia_latipinna
ENSCVAG00000006979smarca4a9996.130ENSPLAG00000014294smarca4a9996.130Poecilia_latipinna
ENSCVAG00000006979smarca4a9585.009ENSPMEG00000008929-9883.551Poecilia_mexicana
ENSCVAG00000006979smarca4a9796.013ENSPMEG00000003725smarca4a9896.013Poecilia_mexicana
ENSCVAG00000006979smarca4a9584.025ENSPREG00000014823-9880.336Poecilia_reticulata
ENSCVAG00000006979smarca4a9995.407ENSPREG00000014608smarca4a9995.407Poecilia_reticulata
ENSCVAG00000006979smarca4a9984.858ENSPPYG00000009568SMARCA49784.942Pongo_abelii
ENSCVAG00000006979smarca4a8087.417ENSPCAG00000014054SMARCA47592.969Procavia_capensis
ENSCVAG00000006979smarca4a9986.774ENSPCOG00000023011SMARCA49786.725Propithecus_coquereli
ENSCVAG00000006979smarca4a9579.964ENSPVAG00000007787SMARCA49379.348Pteropus_vampyrus
ENSCVAG00000006979smarca4a9583.635ENSPNYG00000023995-9884.217Pundamilia_nyererei
ENSCVAG00000006979smarca4a9990.256ENSPNYG00000000717smarca4a9693.935Pundamilia_nyererei
ENSCVAG00000006979smarca4a9883.700ENSPNAG00000024136smarca4a9785.381Pygocentrus_nattereri
ENSCVAG00000006979smarca4a9586.037ENSPNAG00000006636-9386.223Pygocentrus_nattereri
ENSCVAG00000006979smarca4a9986.580ENSRNOG00000009271Smarca49786.755Rattus_norvegicus
ENSCVAG00000006979smarca4a9986.836ENSRBIG00000038696SMARCA49687.014Rhinopithecus_bieti
ENSCVAG00000006979smarca4a9986.836ENSRROG00000045509SMARCA49787.014Rhinopithecus_roxellana
ENSCVAG00000006979smarca4a9986.933ENSSBOG00000026896SMARCA49787.014Saimiri_boliviensis_boliviensis
ENSCVAG00000006979smarca4a9987.454ENSSHAG00000001642SMARCA49987.005Sarcophilus_harrisii
ENSCVAG00000006979smarca4a9683.908ENSSFOG00015009921-9782.925Scleropages_formosus
ENSCVAG00000006979smarca4a9989.845ENSSFOG00015013823smarca49989.653Scleropages_formosus
ENSCVAG00000006979smarca4a9992.426ENSSMAG00000003200smarca4a9991.929Scophthalmus_maximus
ENSCVAG00000006979smarca4a9981.636ENSSMAG00000014082-9981.235Scophthalmus_maximus
ENSCVAG00000006979smarca4a9989.006ENSSDUG00000017298smarca4a9988.326Seriola_dumerili
ENSCVAG00000006979smarca4a9985.901ENSSDUG00000005388-9584.450Seriola_dumerili
ENSCVAG00000006979smarca4a9586.231ENSSLDG00000023663-9786.249Seriola_lalandi_dorsalis
ENSCVAG00000006979smarca4a9993.777ENSSLDG00000024486smarca4a9993.038Seriola_lalandi_dorsalis
ENSCVAG00000006979smarca4a6296.273ENSSARG00000013477SMARCA48296.273Sorex_araneus
ENSCVAG00000006979smarca4a9583.653ENSSPUG00000004558SMARCA49883.184Sphenodon_punctatus
ENSCVAG00000006979smarca4a9993.222ENSSPAG00000004248smarca4a9992.545Stegastes_partitus
ENSCVAG00000006979smarca4a9983.524ENSSPAG00000012533-9781.728Stegastes_partitus
ENSCVAG00000006979smarca4a9986.675ENSSSCG00000013629SMARCA49786.850Sus_scrofa
ENSCVAG00000006979smarca4a9582.634ENSTRUG00000001378SMARCA49882.465Takifugu_rubripes
ENSCVAG00000006979smarca4a9085.988ENSTRUG00000004885smarca4a10085.441Takifugu_rubripes
ENSCVAG00000006979smarca4a7391.459ENSTNIG00000004859-10090.036Tetraodon_nigroviridis
ENSCVAG00000006979smarca4a9982.703ENSTNIG00000004536SMARCA49982.962Tetraodon_nigroviridis
ENSCVAG00000006979smarca4a9984.051ENSTTRG00000009519SMARCA49783.262Tursiops_truncatus
ENSCVAG00000006979smarca4a9986.774ENSUAMG00000014661SMARCA49786.951Ursus_americanus
ENSCVAG00000006979smarca4a9682.741ENSUMAG00000022005SMARCA49891.054Ursus_maritimus
ENSCVAG00000006979smarca4a9986.712ENSVVUG00000017820SMARCA49486.951Vulpes_vulpes
ENSCVAG00000006979smarca4a9981.741ENSXETG00000009355smarca49981.063Xenopus_tropicalis
ENSCVAG00000006979smarca4a9982.668ENSXCOG00000013494-9882.793Xiphophorus_couchianus
ENSCVAG00000006979smarca4a9995.034ENSXMAG00000006321smarca4a9995.531Xiphophorus_maculatus
ENSCVAG00000006979smarca4a9983.932ENSXMAG00000007030-9883.364Xiphophorus_maculatus

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