EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000007035 (Gene tree)
Gene ID: 107088344
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 835-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 6713 bases
Position: chrKL652714.1:432296-439008
Accession: 107088344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000005636	zf-C2H2	PF00096.26	1.1e-48	1	9
ENSCVAP00000005636	zf-C2H2	PF00096.26	1.1e-48	2	9
ENSCVAP00000005636	zf-C2H2	PF00096.26	1.1e-48	3	9
ENSCVAP00000005636	zf-C2H2	PF00096.26	1.1e-48	4	9
ENSCVAP00000005636	zf-C2H2	PF00096.26	1.1e-48	5	9
ENSCVAP00000005636	zf-C2H2	PF00096.26	1.1e-48	6	9
ENSCVAP00000005636	zf-C2H2	PF00096.26	1.1e-48	7	9
ENSCVAP00000005636	zf-C2H2	PF00096.26	1.1e-48	8	9
ENSCVAP00000005636	zf-C2H2	PF00096.26	1.1e-48	9	9
ENSCVAP00000005636	zf-met	PF12874.7	2e-15	1	4
ENSCVAP00000005636	zf-met	PF12874.7	2e-15	2	4
ENSCVAP00000005636	zf-met	PF12874.7	2e-15	3	4
ENSCVAP00000005636	zf-met	PF12874.7	2e-15	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000006352	-	4186	XM_015380457	ENSCVAP00000005636	767 (aa)	XP_015235943	UPI000742A902

Gene Model

Click here to download ENSCVAG00000007035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000007035	-	92	41.129	ENSCVAG00000016092	-	88	41.129
ENSCVAG00000007035	-	53	38.863	ENSCVAG00000016796	-	83	38.863
ENSCVAG00000007035	-	50	39.792	ENSCVAG00000019646	-	68	39.792
ENSCVAG00000007035	-	50	41.358	ENSCVAG00000008206	-	85	42.810
ENSCVAG00000007035	-	55	36.949	ENSCVAG00000014322	-	75	35.890
ENSCVAG00000007035	-	54	40.104	ENSCVAG00000001369	-	93	40.104
ENSCVAG00000007035	-	71	41.830	ENSCVAG00000020119	-	73	41.830
ENSCVAG00000007035	-	92	33.803	ENSCVAG00000004222	-	96	33.803

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007035	-	99	79.204	ENSAPOG00000010280	-	99	79.204	Acanthochromis_polyacanthus
ENSCVAG00000007035	-	51	41.667	ENSACIG00000006755	-	66	41.667	Amphilophus_citrinellus
ENSCVAG00000007035	-	85	79.477	ENSACIG00000017683	-	99	79.477	Amphilophus_citrinellus
ENSCVAG00000007035	-	52	38.971	ENSAOCG00000007134	-	92	39.109	Amphiprion_ocellaris
ENSCVAG00000007035	-	99	77.977	ENSAOCG00000011282	-	99	78.233	Amphiprion_ocellaris
ENSCVAG00000007035	-	77	75.453	ENSAPEG00000019106	-	97	75.783	Amphiprion_percula
ENSCVAG00000007035	-	72	76.106	ENSATEG00000013871	-	95	76.106	Anabas_testudineus
ENSCVAG00000007035	-	64	38.191	ENSACLG00000017487	-	64	37.931	Astatotilapia_calliptera
ENSCVAG00000007035	-	72	75.265	ENSACLG00000000102	-	99	74.558	Astatotilapia_calliptera
ENSCVAG00000007035	-	54	39.806	ENSAMXG00000035127	-	97	38.824	Astyanax_mexicanus
ENSCVAG00000007035	-	51	39.216	ENSAMXG00000012589	-	85	39.216	Astyanax_mexicanus
ENSCVAG00000007035	-	50	38.596	ENSELUG00000008797	-	56	38.596	Esox_lucius
ENSCVAG00000007035	-	56	38.889	ENSFHEG00000013315	-	98	38.889	Fundulus_heteroclitus
ENSCVAG00000007035	-	51	39.236	ENSFHEG00000009207	-	85	37.218	Fundulus_heteroclitus
ENSCVAG00000007035	-	52	38.049	ENSFHEG00000015204	-	63	38.049	Fundulus_heteroclitus
ENSCVAG00000007035	-	58	39.223	ENSFHEG00000008029	-	95	38.571	Fundulus_heteroclitus
ENSCVAG00000007035	-	53	33.251	ENSGAFG00000007110	-	74	35.200	Gambusia_affinis
ENSCVAG00000007035	-	78	75.856	ENSHBUG00000016334	-	99	75.204	Haplochromis_burtoni
ENSCVAG00000007035	-	53	40.000	ENSHCOG00000013455	-	87	39.526	Hippocampus_comes
ENSCVAG00000007035	-	50	37.217	ENSHCOG00000001345	-	81	37.421	Hippocampus_comes
ENSCVAG00000007035	-	61	38.462	ENSHCOG00000011432	-	98	38.462	Hippocampus_comes
ENSCVAG00000007035	-	67	39.216	ENSKMAG00000008262	-	73	39.216	Kryptolebias_marmoratus
ENSCVAG00000007035	-	55	42.353	ENSLBEG00000002278	-	84	38.053	Labrus_bergylta
ENSCVAG00000007035	-	54	41.573	ENSLBEG00000011313	-	89	41.573	Labrus_bergylta
ENSCVAG00000007035	-	53	35.786	ENSLBEG00000010278	-	96	43.243	Labrus_bergylta
ENSCVAG00000007035	-	52	40.850	ENSLBEG00000000373	-	95	40.850	Labrus_bergylta
ENSCVAG00000007035	-	55	42.574	ENSLBEG00000009567	-	96	36.792	Labrus_bergylta
ENSCVAG00000007035	-	72	75.618	ENSMZEG00005008742	-	99	74.912	Maylandia_zebra
ENSCVAG00000007035	-	64	41.791	ENSMZEG00005013221	-	65	39.080	Maylandia_zebra
ENSCVAG00000007035	-	54	39.241	ENSMMOG00000016984	-	87	39.241	Mola_mola
ENSCVAG00000007035	-	50	38.889	ENSMMOG00000005457	-	94	38.562	Mola_mola
ENSCVAG00000007035	-	51	37.952	ENSMMOG00000016958	-	95	42.169	Mola_mola
ENSCVAG00000007035	-	86	77.481	ENSMALG00000016121	-	98	77.333	Monopterus_albus
ENSCVAG00000007035	-	51	38.865	ENSMALG00000018062	-	83	38.865	Monopterus_albus
ENSCVAG00000007035	-	56	42.606	ENSMALG00000013323	-	91	42.606	Monopterus_albus
ENSCVAG00000007035	-	78	75.817	ENSNBRG00000002946	-	99	75.163	Neolamprologus_brichardi
ENSCVAG00000007035	-	54	37.003	ENSOMEG00000015591	-	64	39.873	Oryzias_melastigma
ENSCVAG00000007035	-	55	42.157	ENSPFOG00000007938	-	88	42.157	Poecilia_formosa
ENSCVAG00000007035	-	56	38.941	ENSPLAG00000006864	-	80	38.941	Poecilia_latipinna
ENSCVAG00000007035	-	56	36.196	ENSPMEG00000018673	-	97	40.138	Poecilia_mexicana
ENSCVAG00000007035	-	55	38.261	ENSPMEG00000002078	-	91	40.065	Poecilia_mexicana
ENSCVAG00000007035	-	56	38.689	ENSPREG00000014373	-	83	38.838	Poecilia_reticulata
ENSCVAG00000007035	-	54	44.444	ENSPREG00000005144	-	99	44.444	Poecilia_reticulata
ENSCVAG00000007035	-	63	38.000	ENSPREG00000002681	-	73	38.000	Poecilia_reticulata
ENSCVAG00000007035	-	100	87.039	ENSPREG00000011812	-	100	87.294	Poecilia_reticulata
ENSCVAG00000007035	-	56	37.091	ENSPREG00000014127	-	83	40.909	Poecilia_reticulata
ENSCVAG00000007035	-	55	37.171	ENSPNYG00000015803	-	95	38.188	Pundamilia_nyererei
ENSCVAG00000007035	-	55	39.749	ENSPNYG00000019396	-	90	42.722	Pundamilia_nyererei
ENSCVAG00000007035	-	78	75.693	ENSPNYG00000009360	-	99	75.041	Pundamilia_nyererei
ENSCVAG00000007035	-	56	39.498	ENSSDUG00000020810	-	98	40.196	Seriola_dumerili
ENSCVAG00000007035	-	50	43.750	ENSSLDG00000000203	-	96	43.750	Seriola_lalandi_dorsalis
ENSCVAG00000007035	-	53	37.255	ENSSPAG00000013118	-	81	37.255	Stegastes_partitus
ENSCVAG00000007035	-	56	40.728	ENSSPAG00000021934	-	96	40.728	Stegastes_partitus
ENSCVAG00000007035	-	50	35.065	ENSSPAG00000015776	-	98	39.576	Stegastes_partitus
ENSCVAG00000007035	-	84	72.617	ENSTRUG00000022666	-	99	73.112	Takifugu_rubripes
ENSCVAG00000007035	-	86	71.598	ENSTNIG00000018483	-	85	71.618	Tetraodon_nigroviridis
ENSCVAG00000007035	-	94	38.571	ENSXCOG00000013787	-	83	38.571	Xiphophorus_couchianus
ENSCVAG00000007035	-	63	38.235	ENSXCOG00000017328	-	94	39.216	Xiphophorus_couchianus
ENSCVAG00000007035	-	56	40.196	ENSXMAG00000022362	-	87	42.342	Xiphophorus_maculatus
ENSCVAG00000007035	-	60	37.324	ENSXMAG00000029039	-	86	37.324	Xiphophorus_maculatus
ENSCVAG00000007035	-	57	38.652	ENSXMAG00000014609	-	71	38.652	Xiphophorus_maculatus
ENSCVAG00000007035	-	52	39.080	ENSXMAG00000024076	-	94	39.869	Xiphophorus_maculatus