EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000007112 (Gene tree)
Gene ID: 107083239
Gene Symbol: zcchc17
Alias: ps1d|zgc:85656
Full Name: zinc finger CCHC-type containing 17
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5283 bases
Position: chrKL652571.1:767866-773148
Accession: 107083239
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000005694	S1	PF00575.23	5.8e-12	1	1
ENSCVAP00000023621	S1	PF00575.23	7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000006256	-	2466	XM_015372269	ENSCVAP00000005694	248 (aa)	XP_015227755	UPI000742B48B
ENSCVAT00000006265	-	2573	-	ENSCVAP00000023621	274 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000007112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007112's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007112	zcchc17	62	62.581	ENSG00000121766	ZCCHC17	96	62.143	Homo_sapiens
ENSCVAG00000007112	zcchc17	94	79.060	ENSAPOG00000021724	zcchc17	94	77.253	Acanthochromis_polyacanthus
ENSCVAG00000007112	zcchc17	62	62.581	ENSAMEG00000017710	-	66	61.875	Ailuropoda_melanoleuca
ENSCVAG00000007112	zcchc17	90	75.785	ENSACIG00000020915	zcchc17	93	86.232	Amphilophus_citrinellus
ENSCVAG00000007112	zcchc17	94	84.120	ENSAOCG00000003880	zcchc17	94	78.970	Amphiprion_ocellaris
ENSCVAG00000007112	zcchc17	94	76.824	ENSAPEG00000014460	zcchc17	94	77.253	Amphiprion_percula
ENSCVAG00000007112	zcchc17	65	88.889	ENSATEG00000015942	zcchc17	96	80.851	Anabas_testudineus
ENSCVAG00000007112	zcchc17	58	64.336	ENSACAG00000000389	ZCCHC17	65	62.987	Anolis_carolinensis
ENSCVAG00000007112	zcchc17	62	62.581	ENSANAG00000024208	ZCCHC17	96	62.143	Aotus_nancymaae
ENSCVAG00000007112	zcchc17	75	84.946	ENSACLG00000019174	zcchc17	94	76.395	Astatotilapia_calliptera
ENSCVAG00000007112	zcchc17	71	73.714	ENSAMXG00000020595	zcchc17	71	75.610	Astyanax_mexicanus
ENSCVAG00000007112	zcchc17	62	59.355	ENSBTAG00000001432	-	67	58.750	Bos_taurus
ENSCVAG00000007112	zcchc17	62	62.581	ENSBTAG00000016818	ZCCHC17	66	61.875	Bos_taurus
ENSCVAG00000007112	zcchc17	62	61.935	ENSCJAG00000006259	ZCCHC17	96	61.429	Callithrix_jacchus
ENSCVAG00000007112	zcchc17	62	61.290	ENSCJAG00000045207	-	66	60.625	Callithrix_jacchus
ENSCVAG00000007112	zcchc17	62	62.581	ENSCAFG00000011131	-	66	61.875	Canis_familiaris
ENSCVAG00000007112	zcchc17	92	49.345	ENSCAFG00000001857	-	67	60.000	Canis_familiaris
ENSCVAG00000007112	zcchc17	52	62.308	ENSCAFG00020024828	ZCCHC17	86	63.704	Canis_lupus_dingo
ENSCVAG00000007112	zcchc17	58	56.944	ENSCAFG00020016032	-	90	56.944	Canis_lupus_dingo
ENSCVAG00000007112	zcchc17	62	62.581	ENSCHIG00000015629	-	66	61.875	Capra_hircus
ENSCVAG00000007112	zcchc17	77	54.450	ENSTSYG00000000490	-	96	62.143	Carlito_syrichta
ENSCVAG00000007112	zcchc17	73	56.831	ENSCAPG00000006774	ZCCHC17	74	60.870	Cavia_aperea
ENSCVAG00000007112	zcchc17	62	61.935	ENSCPOG00000022394	-	78	60.870	Cavia_porcellus
ENSCVAG00000007112	zcchc17	62	62.581	ENSCPOG00000000106	ZCCHC17	67	61.491	Cavia_porcellus
ENSCVAG00000007112	zcchc17	62	62.581	ENSCCAG00000033666	ZCCHC17	96	62.143	Cebus_capucinus
ENSCVAG00000007112	zcchc17	62	62.581	ENSCATG00000044586	ZCCHC17	96	62.143	Cercocebus_atys
ENSCVAG00000007112	zcchc17	62	62.987	ENSCLAG00000008794	ZCCHC17	66	62.500	Chinchilla_lanigera
ENSCVAG00000007112	zcchc17	62	62.581	ENSCSAG00000001032	ZCCHC17	66	61.875	Chlorocebus_sabaeus
ENSCVAG00000007112	zcchc17	62	50.323	ENSCHOG00000001581	ZCCHC17	67	50.000	Choloepus_hoffmanni
ENSCVAG00000007112	zcchc17	62	62.581	ENSCANG00000038509	ZCCHC17	96	62.143	Colobus_angolensis_palliatus
ENSCVAG00000007112	zcchc17	62	62.987	ENSCGRG00001014387	Zcchc17	66	63.125	Cricetulus_griseus_chok1gshd
ENSCVAG00000007112	zcchc17	62	62.987	ENSCGRG00000013323	Zcchc17	66	63.125	Cricetulus_griseus_crigri
ENSCVAG00000007112	zcchc17	92	72.368	ENSCSEG00000016039	zcchc17	90	84.173	Cynoglossus_semilaevis
ENSCVAG00000007112	zcchc17	61	80.795	ENSDARG00000018936	zcchc17	68	80.000	Danio_rerio
ENSCVAG00000007112	zcchc17	69	59.302	ENSDNOG00000000509	-	66	61.875	Dasypus_novemcinctus
ENSCVAG00000007112	zcchc17	54	63.704	ENSDORG00000004128	Zcchc17	89	63.704	Dipodomys_ordii
ENSCVAG00000007112	zcchc17	61	62.745	ENSETEG00000007421	ZCCHC17	67	61.875	Echinops_telfairi
ENSCVAG00000007112	zcchc17	62	62.581	ENSEASG00005010819	ZCCHC17	66	61.875	Equus_asinus_asinus
ENSCVAG00000007112	zcchc17	62	62.581	ENSECAG00000025040	ZCCHC17	58	61.875	Equus_caballus
ENSCVAG00000007112	zcchc17	62	60.645	ENSEEUG00000014855	ZCCHC17	66	60.000	Erinaceus_europaeus
ENSCVAG00000007112	zcchc17	71	76.000	ENSELUG00000002450	zcchc17	66	80.769	Esox_lucius
ENSCVAG00000007112	zcchc17	73	57.377	ENSFCAG00000004196	ZCCHC17	95	62.143	Felis_catus
ENSCVAG00000007112	zcchc17	60	61.589	ENSFALG00000001165	ZCCHC17	64	62.025	Ficedula_albicollis
ENSCVAG00000007112	zcchc17	62	62.581	ENSFDAG00000016520	ZCCHC17	66	62.264	Fukomys_damarensis
ENSCVAG00000007112	zcchc17	94	83.262	ENSFHEG00000007848	zcchc17	94	82.833	Fundulus_heteroclitus
ENSCVAG00000007112	zcchc17	74	79.235	ENSGMOG00000010452	zcchc17	67	82.249	Gadus_morhua
ENSCVAG00000007112	zcchc17	60	61.589	ENSGALG00000000618	ZCCHC17	66	61.783	Gallus_gallus
ENSCVAG00000007112	zcchc17	94	86.695	ENSGAFG00000015591	zcchc17	94	83.262	Gambusia_affinis
ENSCVAG00000007112	zcchc17	68	85.207	ENSGACG00000005616	zcchc17	66	85.207	Gasterosteus_aculeatus
ENSCVAG00000007112	zcchc17	63	62.420	ENSGAGG00000019515	ZCCHC17	64	62.420	Gopherus_agassizii
ENSCVAG00000007112	zcchc17	62	62.581	ENSGGOG00000009126	ZCCHC17	96	62.143	Gorilla_gorilla
ENSCVAG00000007112	zcchc17	75	84.946	ENSHBUG00000018638	zcchc17	94	76.395	Haplochromis_burtoni
ENSCVAG00000007112	zcchc17	62	57.419	ENSHGLG00000005931	-	71	56.250	Heterocephalus_glaber_female
ENSCVAG00000007112	zcchc17	93	40.948	ENSHGLG00000014866	-	70	50.625	Heterocephalus_glaber_female
ENSCVAG00000007112	zcchc17	62	62.581	ENSHGLG00000019323	ZCCHC17	66	61.875	Heterocephalus_glaber_female
ENSCVAG00000007112	zcchc17	93	40.948	ENSHGLG00100000976	-	70	50.625	Heterocephalus_glaber_male
ENSCVAG00000007112	zcchc17	52	62.308	ENSHGLG00100014521	ZCCHC17	88	63.704	Heterocephalus_glaber_male
ENSCVAG00000007112	zcchc17	60	58.278	ENSHGLG00100019907	-	65	57.325	Heterocephalus_glaber_male
ENSCVAG00000007112	zcchc17	62	57.419	ENSHGLG00100009772	-	71	57.325	Heterocephalus_glaber_male
ENSCVAG00000007112	zcchc17	87	73.059	ENSHCOG00000005075	zcchc17	65	85.000	Hippocampus_comes
ENSCVAG00000007112	zcchc17	69	70.930	ENSIPUG00000020511	zcchc17	69	73.292	Ictalurus_punctatus
ENSCVAG00000007112	zcchc17	62	62.581	ENSSTOG00000003825	ZCCHC17	68	62.577	Ictidomys_tridecemlineatus
ENSCVAG00000007112	zcchc17	94	79.399	ENSKMAG00000003662	zcchc17	95	79.399	Kryptolebias_marmoratus
ENSCVAG00000007112	zcchc17	75	81.283	ENSLBEG00000002644	zcchc17	67	85.030	Labrus_bergylta
ENSCVAG00000007112	zcchc17	53	68.182	ENSLACG00000016945	ZCCHC17	56	68.182	Latimeria_chalumnae
ENSCVAG00000007112	zcchc17	63	72.152	ENSLOCG00000005280	zcchc17	61	72.152	Lepisosteus_oculatus
ENSCVAG00000007112	zcchc17	62	62.581	ENSLAFG00000015364	ZCCHC17	66	61.875	Loxodonta_africana
ENSCVAG00000007112	zcchc17	62	62.581	ENSMFAG00000039045	ZCCHC17	96	62.143	Macaca_fascicularis
ENSCVAG00000007112	zcchc17	62	62.581	ENSMMUG00000012156	ZCCHC17	96	62.143	Macaca_mulatta
ENSCVAG00000007112	zcchc17	62	62.581	ENSMNEG00000032021	ZCCHC17	96	62.143	Macaca_nemestrina
ENSCVAG00000007112	zcchc17	62	62.581	ENSMLEG00000040817	ZCCHC17	96	62.143	Mandrillus_leucophaeus
ENSCVAG00000007112	zcchc17	94	74.790	ENSMAMG00000011701	zcchc17	66	87.574	Mastacembelus_armatus
ENSCVAG00000007112	zcchc17	75	84.946	ENSMZEG00005005784	zcchc17	94	76.395	Maylandia_zebra
ENSCVAG00000007112	zcchc17	60	62.914	ENSMGAG00000000777	ZCCHC17	64	63.057	Meleagris_gallopavo
ENSCVAG00000007112	zcchc17	66	59.639	ENSMAUG00000005269	Zcchc17	64	65.035	Mesocricetus_auratus
ENSCVAG00000007112	zcchc17	62	55.484	ENSMICG00000028289	-	66	55.000	Microcebus_murinus
ENSCVAG00000007112	zcchc17	59	52.740	ENSMICG00000027526	-	65	52.740	Microcebus_murinus
ENSCVAG00000007112	zcchc17	62	62.581	ENSMICG00000009354	-	96	62.143	Microcebus_murinus
ENSCVAG00000007112	zcchc17	62	62.987	ENSMOCG00000014937	Zcchc17	67	62.500	Microtus_ochrogaster
ENSCVAG00000007112	zcchc17	62	79.739	ENSMMOG00000019813	zcchc17	67	79.739	Mola_mola
ENSCVAG00000007112	zcchc17	60	66.887	ENSMODG00000017082	-	64	66.879	Monodelphis_domestica
ENSCVAG00000007112	zcchc17	60	61.589	ENSMODG00000020372	-	84	61.146	Monodelphis_domestica
ENSCVAG00000007112	zcchc17	60	58.940	ENSMODG00000025345	-	75	58.599	Monodelphis_domestica
ENSCVAG00000007112	zcchc17	87	76.852	ENSMALG00000016295	zcchc17	94	74.888	Monopterus_albus
ENSCVAG00000007112	zcchc17	62	62.987	MGP_CAROLIEiJ_G0026546	Zcchc17	66	62.500	Mus_caroli
ENSCVAG00000007112	zcchc17	62	62.987	ENSMUSG00000028772	Zcchc17	66	62.500	Mus_musculus
ENSCVAG00000007112	zcchc17	62	62.987	MGP_PahariEiJ_G0028878	Zcchc17	66	62.500	Mus_pahari
ENSCVAG00000007112	zcchc17	62	62.987	MGP_SPRETEiJ_G0027526	Zcchc17	66	62.500	Mus_spretus
ENSCVAG00000007112	zcchc17	62	55.484	ENSMPUG00000015442	ZCCHC17	67	55.000	Mustela_putorius_furo
ENSCVAG00000007112	zcchc17	65	61.728	ENSMLUG00000000594	ZCCHC17	67	62.500	Myotis_lucifugus
ENSCVAG00000007112	zcchc17	69	56.395	ENSNGAG00000022689	Zcchc17	66	60.000	Nannospalax_galili
ENSCVAG00000007112	zcchc17	62	62.581	ENSNLEG00000001493	ZCCHC17	96	62.143	Nomascus_leucogenys
ENSCVAG00000007112	zcchc17	55	66.667	ENSOPRG00000014449	ZCCHC17	73	65.734	Ochotona_princeps
ENSCVAG00000007112	zcchc17	62	62.581	ENSODEG00000003683	ZCCHC17	66	61.875	Octodon_degus
ENSCVAG00000007112	zcchc17	75	83.333	ENSONIG00000002308	zcchc17	94	76.824	Oreochromis_niloticus
ENSCVAG00000007112	zcchc17	62	58.710	ENSOCUG00000027238	-	66	58.125	Oryctolagus_cuniculus
ENSCVAG00000007112	zcchc17	75	82.353	ENSORLG00000011563	zcchc17	93	78.414	Oryzias_latipes
ENSCVAG00000007112	zcchc17	75	82.353	ENSORLG00020019636	zcchc17	80	85.207	Oryzias_latipes_hni
ENSCVAG00000007112	zcchc17	75	82.258	ENSORLG00015011437	zcchc17	93	81.057	Oryzias_latipes_hsok
ENSCVAG00000007112	zcchc17	75	83.333	ENSOMEG00000009464	zcchc17	92	81.498	Oryzias_melastigma
ENSCVAG00000007112	zcchc17	62	61.935	ENSOGAG00000013749	ZCCHC17	66	61.875	Otolemur_garnettii
ENSCVAG00000007112	zcchc17	62	62.179	ENSOARG00000001618	-	67	61.491	Ovis_aries
ENSCVAG00000007112	zcchc17	62	62.581	ENSPPAG00000030937	ZCCHC17	96	62.143	Pan_paniscus
ENSCVAG00000007112	zcchc17	62	62.581	ENSPPRG00000003044	ZCCHC17	95	62.143	Panthera_pardus
ENSCVAG00000007112	zcchc17	62	62.581	ENSPTIG00000010650	ZCCHC17	95	62.143	Panthera_tigris_altaica
ENSCVAG00000007112	zcchc17	62	62.581	ENSPTRG00000000456	ZCCHC17	96	62.143	Pan_troglodytes
ENSCVAG00000007112	zcchc17	62	62.581	ENSPANG00000016167	ZCCHC17	96	62.143	Papio_anubis
ENSCVAG00000007112	zcchc17	69	74.118	ENSPKIG00000010742	zcchc17	66	75.610	Paramormyrops_kingsleyae
ENSCVAG00000007112	zcchc17	62	62.987	ENSPSIG00000007187	ZCCHC17	65	63.125	Pelodiscus_sinensis
ENSCVAG00000007112	zcchc17	94	75.107	ENSPMGG00000005830	zcchc17	94	75.107	Periophthalmus_magnuspinnatus
ENSCVAG00000007112	zcchc17	62	62.338	ENSPEMG00000015853	-	67	61.875	Peromyscus_maniculatus_bairdii
ENSCVAG00000007112	zcchc17	60	68.212	ENSPCIG00000014143	-	65	68.153	Phascolarctos_cinereus
ENSCVAG00000007112	zcchc17	94	87.288	ENSPFOG00000007896	zcchc17	94	81.116	Poecilia_formosa
ENSCVAG00000007112	zcchc17	94	86.864	ENSPLAG00000007114	zcchc17	94	80.687	Poecilia_latipinna
ENSCVAG00000007112	zcchc17	94	87.288	ENSPMEG00000014567	zcchc17	94	81.116	Poecilia_mexicana
ENSCVAG00000007112	zcchc17	94	87.554	ENSPREG00000005325	zcchc17	77	82.627	Poecilia_reticulata
ENSCVAG00000007112	zcchc17	62	60.645	ENSPPYG00000001617	-	56	60.000	Pongo_abelii
ENSCVAG00000007112	zcchc17	62	58.065	ENSPCAG00000011665	ZCCHC17	67	57.500	Procavia_capensis
ENSCVAG00000007112	zcchc17	62	62.581	ENSPCOG00000024007	ZCCHC17	96	62.143	Propithecus_coquereli
ENSCVAG00000007112	zcchc17	62	62.581	ENSPVAG00000014747	ZCCHC17	66	61.875	Pteropus_vampyrus
ENSCVAG00000007112	zcchc17	75	84.946	ENSPNYG00000009648	zcchc17	97	88.489	Pundamilia_nyererei
ENSCVAG00000007112	zcchc17	70	76.879	ENSPNAG00000026780	zcchc17	69	80.625	Pygocentrus_nattereri
ENSCVAG00000007112	zcchc17	62	63.636	ENSRNOG00000012266	Zcchc17	66	63.125	Rattus_norvegicus
ENSCVAG00000007112	zcchc17	62	62.581	ENSRBIG00000033939	ZCCHC17	96	62.143	Rhinopithecus_bieti
ENSCVAG00000007112	zcchc17	62	62.581	ENSRROG00000028866	ZCCHC17	96	62.143	Rhinopithecus_roxellana
ENSCVAG00000007112	zcchc17	62	62.581	ENSSBOG00000029249	ZCCHC17	96	62.143	Saimiri_boliviensis_boliviensis
ENSCVAG00000007112	zcchc17	60	65.563	ENSSHAG00000008748	ZCCHC17	66	65.823	Sarcophilus_harrisii
ENSCVAG00000007112	zcchc17	69	70.175	ENSSFOG00015021334	zcchc17	63	73.750	Scleropages_formosus
ENSCVAG00000007112	zcchc17	91	75.527	ENSSMAG00000010817	zcchc17	94	75.410	Scophthalmus_maximus
ENSCVAG00000007112	zcchc17	75	82.888	ENSSDUG00000009095	zcchc17	94	76.271	Seriola_dumerili
ENSCVAG00000007112	zcchc17	71	84.270	ENSSLDG00000009837	zcchc17	91	76.444	Seriola_lalandi_dorsalis
ENSCVAG00000007112	zcchc17	68	59.412	ENSSPUG00000006912	ZCCHC17	60	63.636	Sphenodon_punctatus
ENSCVAG00000007112	zcchc17	94	75.424	ENSSPAG00000016785	zcchc17	94	83.051	Stegastes_partitus
ENSCVAG00000007112	zcchc17	62	62.581	ENSSSCG00000031639	ZCCHC17	66	61.875	Sus_scrofa
ENSCVAG00000007112	zcchc17	55	61.594	ENSTGUG00000000817	ZCCHC17	65	61.806	Taeniopygia_guttata
ENSCVAG00000007112	zcchc17	94	74.249	ENSTRUG00000013252	zcchc17	94	75.536	Takifugu_rubripes
ENSCVAG00000007112	zcchc17	90	72.321	ENSTNIG00000016980	zcchc17	69	82.822	Tetraodon_nigroviridis
ENSCVAG00000007112	zcchc17	62	62.581	ENSTTRG00000014870	ZCCHC17	66	61.875	Tursiops_truncatus
ENSCVAG00000007112	zcchc17	73	57.377	ENSUAMG00000018258	ZCCHC17	82	61.875	Ursus_americanus
ENSCVAG00000007112	zcchc17	62	62.581	ENSUMAG00000009188	-	66	61.875	Ursus_maritimus
ENSCVAG00000007112	zcchc17	62	62.338	ENSVPAG00000003834	ZCCHC17	66	61.875	Vicugna_pacos
ENSCVAG00000007112	zcchc17	66	61.212	ENSXETG00000012917	zcchc17	86	64.474	Xenopus_tropicalis
ENSCVAG00000007112	zcchc17	94	84.120	ENSXCOG00000020147	zcchc17	94	83.691	Xiphophorus_couchianus
ENSCVAG00000007112	zcchc17	94	88.841	ENSXMAG00000002980	zcchc17	94	84.549	Xiphophorus_maculatus