EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000007159 (Gene tree)
Gene ID: -
Gene Symbol: mrps28
Alias: zgc:152965
Full Name: mitochondrial ribosomal protein S28
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 1915 bases
Position: chrKL652558.1:156047-157961
Accession: ZDB-GENE-061110-52
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000005724	MRP-S35	PF10246.9	8.8e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000006200	-	351	-	ENSCVAP00000005724	116 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000007159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007159's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007159	mrps28	97	50.000	ENSG00000147586	MRPS28	94	56.701	Homo_sapiens
ENSCVAG00000007159	mrps28	79	72.826	ENSAPOG00000007350	mrps28	78	72.826	Acanthochromis_polyacanthus
ENSCVAG00000007159	mrps28	88	51.852	ENSAMEG00000017516	MRPS28	94	51.852	Ailuropoda_melanoleuca
ENSCVAG00000007159	mrps28	93	66.667	ENSACIG00000007839	mrps28	65	66.667	Amphilophus_citrinellus
ENSCVAG00000007159	mrps28	93	64.912	ENSAOCG00000000705	mrps28	66	64.912	Amphiprion_ocellaris
ENSCVAG00000007159	mrps28	93	64.912	ENSAPEG00000016051	mrps28	66	64.912	Amphiprion_percula
ENSCVAG00000007159	mrps28	84	69.231	ENSATEG00000015295	mrps28	57	69.231	Anabas_testudineus
ENSCVAG00000007159	mrps28	85	55.238	ENSAPLG00000005666	MRPS28	98	55.238	Anas_platyrhynchos
ENSCVAG00000007159	mrps28	87	66.355	ENSACLG00000003892	mrps28	90	66.355	Astatotilapia_calliptera
ENSCVAG00000007159	mrps28	80	60.606	ENSAMXG00000026324	mrps28	54	60.606	Astyanax_mexicanus
ENSCVAG00000007159	mrps28	94	49.565	ENSBTAG00000001302	MRPS28	61	49.565	Bos_taurus
ENSCVAG00000007159	mrps28	81	41.000	WBGene00012830	mrps-28	66	39.823	Caenorhabditis_elegans
ENSCVAG00000007159	mrps28	92	53.982	ENSCAFG00000008393	MRPS28	62	53.982	Canis_familiaris
ENSCVAG00000007159	mrps28	92	53.982	ENSCAFG00020017987	MRPS28	62	53.982	Canis_lupus_dingo
ENSCVAG00000007159	mrps28	99	49.587	ENSCHIG00000018727	MRPS28	64	49.587	Capra_hircus
ENSCVAG00000007159	mrps28	96	43.243	ENSTSYG00000031343	-	65	43.243	Carlito_syrichta
ENSCVAG00000007159	mrps28	82	52.632	ENSCAPG00000006948	-	86	52.632	Cavia_aperea
ENSCVAG00000007159	mrps28	82	52.632	ENSCPOG00000031885	-	86	52.632	Cavia_porcellus
ENSCVAG00000007159	mrps28	93	50.000	ENSCCAG00000022534	MRPS28	78	55.789	Cebus_capucinus
ENSCVAG00000007159	mrps28	76	61.364	ENSCLAG00000003227	-	93	53.922	Chinchilla_lanigera
ENSCVAG00000007159	mrps28	91	51.351	ENSCHOG00000004885	MRPS28	61	51.351	Choloepus_hoffmanni
ENSCVAG00000007159	mrps28	93	58.772	ENSCPBG00000007206	MRPS28	57	58.772	Chrysemys_picta_bellii
ENSCVAG00000007159	mrps28	88	56.481	ENSCGRG00001018741	Mrps28	58	56.481	Cricetulus_griseus_chok1gshd
ENSCVAG00000007159	mrps28	88	55.556	ENSCGRG00000018208	Mrps28	93	55.556	Cricetulus_griseus_crigri
ENSCVAG00000007159	mrps28	79	63.265	ENSCSEG00000020947	mrps28	92	63.265	Cynoglossus_semilaevis
ENSCVAG00000007159	mrps28	87	57.426	ENSDARG00000041538	mrps28	57	57.426	Danio_rerio
ENSCVAG00000007159	mrps28	89	52.294	ENSDORG00000002762	Mrps28	60	52.294	Dipodomys_ordii
ENSCVAG00000007159	mrps28	78	52.577	FBgn0034361	mRpS28	50	52.577	Drosophila_melanogaster
ENSCVAG00000007159	mrps28	75	61.290	ENSEBUG00000010846	mrps28	55	61.290	Eptatretus_burgeri
ENSCVAG00000007159	mrps28	94	53.913	ENSEASG00005020574	MRPS28	61	53.913	Equus_asinus_asinus
ENSCVAG00000007159	mrps28	94	53.043	ENSECAG00000015430	MRPS28	61	53.043	Equus_caballus
ENSCVAG00000007159	mrps28	92	52.212	ENSFCAG00000032510	MRPS28	60	52.212	Felis_catus
ENSCVAG00000007159	mrps28	90	51.818	ENSFALG00000008608	MRPS28	83	51.818	Ficedula_albicollis
ENSCVAG00000007159	mrps28	84	54.808	ENSFDAG00000013634	MRPS28	54	54.808	Fukomys_damarensis
ENSCVAG00000007159	mrps28	90	83.654	ENSFHEG00000006233	mrps28	83	83.654	Fundulus_heteroclitus
ENSCVAG00000007159	mrps28	88	84.314	ENSGAFG00000014759	mrps28	55	84.314	Gambusia_affinis
ENSCVAG00000007159	mrps28	89	66.972	ENSGACG00000019939	mrps28	57	66.972	Gasterosteus_aculeatus
ENSCVAG00000007159	mrps28	93	55.263	ENSGAGG00000025904	MRPS28	67	55.263	Gopherus_agassizii
ENSCVAG00000007159	mrps28	83	67.647	ENSHBUG00000014315	mrps28	87	67.647	Haplochromis_burtoni
ENSCVAG00000007159	mrps28	93	50.000	ENSHGLG00000009986	MRPS28	50	50.000	Heterocephalus_glaber_female
ENSCVAG00000007159	mrps28	93	50.000	ENSHGLG00100019258	MRPS28	50	50.000	Heterocephalus_glaber_male
ENSCVAG00000007159	mrps28	78	60.825	ENSHCOG00000011561	mrps28	55	60.825	Hippocampus_comes
ENSCVAG00000007159	mrps28	84	55.769	ENSIPUG00000012566	mrps28	56	55.769	Ictalurus_punctatus
ENSCVAG00000007159	mrps28	80	69.697	ENSKMAG00000006636	mrps28	55	68.269	Kryptolebias_marmoratus
ENSCVAG00000007159	mrps28	82	55.446	ENSLACG00000014702	MRPS28	54	55.446	Latimeria_chalumnae
ENSCVAG00000007159	mrps28	81	65.000	ENSLOCG00000017359	mrps28	52	65.000	Lepisosteus_oculatus
ENSCVAG00000007159	mrps28	92	64.348	ENSMAMG00000017782	mrps28	97	64.348	Mastacembelus_armatus
ENSCVAG00000007159	mrps28	87	66.355	ENSMZEG00005010529	-	90	66.355	Maylandia_zebra
ENSCVAG00000007159	mrps28	87	66.355	ENSMZEG00005014997	mrps28	90	66.355	Maylandia_zebra
ENSCVAG00000007159	mrps28	84	55.340	ENSMGAG00000011622	MRPS28	99	55.340	Meleagris_gallopavo
ENSCVAG00000007159	mrps28	88	55.556	ENSMAUG00000009465	Mrps28	58	55.556	Mesocricetus_auratus
ENSCVAG00000007159	mrps28	96	48.718	ENSMICG00000044873	MRPS28	64	48.718	Microcebus_murinus
ENSCVAG00000007159	mrps28	94	55.652	ENSMOCG00000021930	Mrps28	61	55.652	Microtus_ochrogaster
ENSCVAG00000007159	mrps28	97	54.237	ENSMODG00000006621	MRPS28	63	54.237	Monodelphis_domestica
ENSCVAG00000007159	mrps28	95	59.483	ENSMALG00000006494	mrps28	85	59.483	Monopterus_albus
ENSCVAG00000007159	mrps28	88	55.556	MGP_CAROLIEiJ_G0024833	Mrps28	58	55.556	Mus_caroli
ENSCVAG00000007159	mrps28	88	55.556	ENSMUSG00000040269	Mrps28	58	55.556	Mus_musculus
ENSCVAG00000007159	mrps28	88	55.556	MGP_PahariEiJ_G0026281	Mrps28	58	55.556	Mus_pahari
ENSCVAG00000007159	mrps28	88	55.556	MGP_SPRETEiJ_G0025763	Mrps28	58	55.556	Mus_spretus
ENSCVAG00000007159	mrps28	98	50.833	ENSMPUG00000001853	MRPS28	64	50.833	Mustela_putorius_furo
ENSCVAG00000007159	mrps28	84	57.282	ENSMLUG00000015175	MRPS28	55	57.282	Myotis_lucifugus
ENSCVAG00000007159	mrps28	96	53.846	ENSNGAG00000000216	Mrps28	63	53.846	Nannospalax_galili
ENSCVAG00000007159	mrps28	93	62.281	ENSNBRG00000021393	mrps28	65	62.281	Neolamprologus_brichardi
ENSCVAG00000007159	mrps28	93	55.263	ENSMEUG00000007676	MRPS28	63	55.263	Notamacropus_eugenii
ENSCVAG00000007159	mrps28	94	51.304	ENSODEG00000005701	MRPS28	61	51.304	Octodon_degus
ENSCVAG00000007159	mrps28	93	62.281	ENSONIG00000020758	mrps28	65	62.281	Oreochromis_niloticus
ENSCVAG00000007159	mrps28	96	50.427	ENSOCUG00000000867	MRPS28	67	50.427	Oryctolagus_cuniculus
ENSCVAG00000007159	mrps28	84	66.346	ENSORLG00000026843	mrps28	58	66.346	Oryzias_latipes
ENSCVAG00000007159	mrps28	84	67.308	ENSORLG00020022089	mrps28	59	67.308	Oryzias_latipes_hni
ENSCVAG00000007159	mrps28	93	65.789	ENSOMEG00000008250	mrps28	65	65.789	Oryzias_melastigma
ENSCVAG00000007159	mrps28	96	46.154	ENSOGAG00000016599	MRPS28	63	46.154	Otolemur_garnettii
ENSCVAG00000007159	mrps28	92	52.212	ENSPPRG00000009220	MRPS28	60	52.212	Panthera_pardus
ENSCVAG00000007159	mrps28	92	52.212	ENSPTIG00000019934	MRPS28	60	52.212	Panthera_tigris_altaica
ENSCVAG00000007159	mrps28	87	57.426	ENSPKIG00000022304	mrps28	81	57.426	Paramormyrops_kingsleyae
ENSCVAG00000007159	mrps28	75	56.989	ENSPMGG00000008007	-	51	56.989	Periophthalmus_magnuspinnatus
ENSCVAG00000007159	mrps28	94	56.522	ENSPEMG00000012338	Mrps28	61	56.522	Peromyscus_maniculatus_bairdii
ENSCVAG00000007159	mrps28	83	59.804	ENSPMAG00000002015	mrps28	91	59.804	Petromyzon_marinus
ENSCVAG00000007159	mrps28	97	56.780	ENSPCIG00000026795	MRPS28	64	56.780	Phascolarctos_cinereus
ENSCVAG00000007159	mrps28	91	82.075	ENSPFOG00000020828	mrps28	61	82.075	Poecilia_formosa
ENSCVAG00000007159	mrps28	91	82.075	ENSPLAG00000005387	mrps28	61	82.075	Poecilia_latipinna
ENSCVAG00000007159	mrps28	76	87.500	ENSPMEG00000022332	mrps28	53	87.500	Poecilia_mexicana
ENSCVAG00000007159	mrps28	88	84.314	ENSPREG00000005690	mrps28	60	84.314	Poecilia_reticulata
ENSCVAG00000007159	mrps28	97	51.695	ENSPPYG00000018694	MRPS28	65	51.695	Pongo_abelii
ENSCVAG00000007159	mrps28	77	56.842	ENSPCAG00000000404	MRPS28	82	56.842	Procavia_capensis
ENSCVAG00000007159	mrps28	96	48.718	ENSPCOG00000003866	MRPS28	64	48.718	Propithecus_coquereli
ENSCVAG00000007159	mrps28	88	52.778	ENSPVAG00000007815	MRPS28	60	52.778	Pteropus_vampyrus
ENSCVAG00000007159	mrps28	87	66.355	ENSPNYG00000016499	mrps28	90	66.355	Pundamilia_nyererei
ENSCVAG00000007159	mrps28	80	62.626	ENSPNAG00000018621	mrps28	53	62.626	Pygocentrus_nattereri
ENSCVAG00000007159	mrps28	88	55.556	ENSRNOG00000032630	Mrps28	58	55.556	Rattus_norvegicus
ENSCVAG00000007159	mrps28	97	49.580	ENSSBOG00000028198	MRPS28	76	56.383	Saimiri_boliviensis_boliviensis
ENSCVAG00000007159	mrps28	91	57.658	ENSSFOG00015004723	mrps28	55	57.658	Scleropages_formosus
ENSCVAG00000007159	mrps28	91	66.964	ENSSMAG00000021042	mrps28	65	66.964	Scophthalmus_maximus
ENSCVAG00000007159	mrps28	80	72.727	ENSSDUG00000021722	mrps28	61	68.182	Seriola_dumerili
ENSCVAG00000007159	mrps28	75	73.118	ENSSLDG00000013261	mrps28	58	66.355	Seriola_lalandi_dorsalis
ENSCVAG00000007159	mrps28	88	56.481	ENSSARG00000007429	MRPS28	62	53.448	Sorex_araneus
ENSCVAG00000007159	mrps28	93	50.877	ENSSPUG00000017502	MRPS28	67	50.877	Sphenodon_punctatus
ENSCVAG00000007159	mrps28	93	62.281	ENSSPAG00000003194	mrps28	66	62.281	Stegastes_partitus
ENSCVAG00000007159	mrps28	99	47.107	ENSSSCG00000037782	MRPS28	64	47.107	Sus_scrofa
ENSCVAG00000007159	mrps28	74	66.304	ENSTRUG00000012758	mrps28	51	66.304	Takifugu_rubripes
ENSCVAG00000007159	mrps28	96	48.718	ENSTBEG00000010380	MRPS28	65	49.138	Tupaia_belangeri
ENSCVAG00000007159	mrps28	93	49.123	ENSTTRG00000000087	MRPS28	63	49.123	Tursiops_truncatus
ENSCVAG00000007159	mrps28	90	51.818	ENSUAMG00000018127	MRPS28	59	51.818	Ursus_americanus
ENSCVAG00000007159	mrps28	90	51.818	ENSUMAG00000014927	MRPS28	59	51.818	Ursus_maritimus
ENSCVAG00000007159	mrps28	91	51.351	ENSVPAG00000000652	MRPS28	61	51.351	Vicugna_pacos
ENSCVAG00000007159	mrps28	86	55.660	ENSVVUG00000000384	MRPS28	59	55.660	Vulpes_vulpes
ENSCVAG00000007159	mrps28	84	77.778	ENSXMAG00000008774	mrps28	54	77.778	Xiphophorus_maculatus