EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000007250 (Gene tree)
Gene ID: 107092260
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 17744 bases
Position: chrKL652872.1:525512-543255
Accession: 107092260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000023706	zf-RanBP	PF00641.18	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000006058	-	4013	XM_015386620	ENSCVAP00000023706	707 (aa)	XP_015242106	UPI000742BC81

Gene Model

Click here to download ENSCVAG00000007250's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007250's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000007250	shrprbck1r	76	43.785	ENSCVAG00000002649	rbck1	98	43.785
ENSCVAG00000007250	shrprbck1r	59	54.953	ENSCVAG00000006586	sharpin	95	54.953

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007250	shrprbck1r	59	56.206	ENSAPOG00000023352	sharpin	95	56.206	Acanthochromis_polyacanthus
ENSCVAG00000007250	shrprbck1r	100	79.102	ENSAPOG00000022737	shrprbck1r	100	79.102	Acanthochromis_polyacanthus
ENSCVAG00000007250	shrprbck1r	100	80.169	ENSACIG00000002184	shrprbck1r	100	80.169	Amphilophus_citrinellus
ENSCVAG00000007250	shrprbck1r	59	55.972	ENSAOCG00000017464	sharpin	95	55.972	Amphiprion_ocellaris
ENSCVAG00000007250	shrprbck1r	100	82.444	ENSAOCG00000002890	shrprbck1r	100	82.444	Amphiprion_ocellaris
ENSCVAG00000007250	shrprbck1r	59	55.972	ENSAPEG00000004049	sharpin	95	55.972	Amphiprion_percula
ENSCVAG00000007250	shrprbck1r	100	80.365	ENSAPEG00000023274	shrprbck1r	100	80.365	Amphiprion_percula
ENSCVAG00000007250	shrprbck1r	60	56.845	ENSATEG00000007832	sharpin	88	56.845	Anabas_testudineus
ENSCVAG00000007250	shrprbck1r	100	78.451	ENSATEG00000014561	shrprbck1r	100	78.873	Anabas_testudineus
ENSCVAG00000007250	shrprbck1r	100	79.466	ENSACLG00000022609	shrprbck1r	100	80.169	Astatotilapia_calliptera
ENSCVAG00000007250	shrprbck1r	55	55.527	ENSAMXG00000006229	sharpin	97	55.527	Astyanax_mexicanus
ENSCVAG00000007250	shrprbck1r	100	69.126	ENSAMXG00000021016	shrprbck1r	100	69.505	Astyanax_mexicanus
ENSCVAG00000007250	shrprbck1r	100	72.612	ENSCSEG00000011306	shrprbck1r	100	72.893	Cynoglossus_semilaevis
ENSCVAG00000007250	shrprbck1r	58	52.913	ENSDARG00000076995	sharpin	97	52.913	Danio_rerio
ENSCVAG00000007250	shrprbck1r	100	68.985	ENSDARG00000059871	shrprbck1r	100	69.124	Danio_rerio
ENSCVAG00000007250	shrprbck1r	100	72.370	ENSELUG00000016022	shrprbck1r	100	72.370	Esox_lucius
ENSCVAG00000007250	shrprbck1r	59	55.269	ENSFHEG00000013564	sharpin	94	55.269	Fundulus_heteroclitus
ENSCVAG00000007250	shrprbck1r	51	58.232	ENSGMOG00000010123	sharpin	91	58.232	Gadus_morhua
ENSCVAG00000007250	shrprbck1r	100	90.268	ENSGAFG00000009309	shrprbck1r	100	90.268	Gambusia_affinis
ENSCVAG00000007250	shrprbck1r	59	41.905	ENSGAFG00000021405	sharpin	95	41.905	Gambusia_affinis
ENSCVAG00000007250	shrprbck1r	75	78.343	ENSGACG00000002544	shrprbck1r	99	78.343	Gasterosteus_aculeatus
ENSCVAG00000007250	shrprbck1r	100	80.169	ENSHBUG00000021933	shrprbck1r	100	80.365	Haplochromis_burtoni
ENSCVAG00000007250	shrprbck1r	61	51.628	ENSHCOG00000018847	sharpin	81	51.732	Hippocampus_comes
ENSCVAG00000007250	shrprbck1r	55	54.707	ENSIPUG00000011951	sharpin	95	88.462	Ictalurus_punctatus
ENSCVAG00000007250	shrprbck1r	96	68.452	ENSIPUG00000014247	shrprbck1r	100	66.483	Ictalurus_punctatus
ENSCVAG00000007250	shrprbck1r	59	55.093	ENSKMAG00000015204	sharpin	76	55.093	Kryptolebias_marmoratus
ENSCVAG00000007250	shrprbck1r	100	78.532	ENSKMAG00000015215	shrprbck1r	100	78.532	Kryptolebias_marmoratus
ENSCVAG00000007250	shrprbck1r	60	56.813	ENSLBEG00000016624	sharpin	96	56.813	Labrus_bergylta
ENSCVAG00000007250	shrprbck1r	100	79.437	ENSLBEG00000016876	shrprbck1r	100	80.141	Labrus_bergylta
ENSCVAG00000007250	shrprbck1r	96	52.770	ENSLACG00000010948	-	98	51.617	Latimeria_chalumnae
ENSCVAG00000007250	shrprbck1r	100	68.707	ENSLOCG00000008910	shrprbck1r	100	69.444	Lepisosteus_oculatus
ENSCVAG00000007250	shrprbck1r	100	78.873	ENSMAMG00000022930	shrprbck1r	100	79.155	Mastacembelus_armatus
ENSCVAG00000007250	shrprbck1r	51	70.968	ENSMAMG00000014645	sharpin	95	70.968	Mastacembelus_armatus
ENSCVAG00000007250	shrprbck1r	100	79.325	ENSMZEG00005021257	shrprbck1r	100	80.028	Maylandia_zebra
ENSCVAG00000007250	shrprbck1r	100	76.569	ENSMMOG00000003764	shrprbck1r	100	76.569	Mola_mola
ENSCVAG00000007250	shrprbck1r	96	80.412	ENSMALG00000008861	shrprbck1r	95	80.412	Monopterus_albus
ENSCVAG00000007250	shrprbck1r	100	80.028	ENSNBRG00000002270	shrprbck1r	100	80.731	Neolamprologus_brichardi
ENSCVAG00000007250	shrprbck1r	55	53.398	ENSONIG00000009626	-	97	53.398	Oreochromis_niloticus
ENSCVAG00000007250	shrprbck1r	100	80.028	ENSONIG00000014401	shrprbck1r	100	80.731	Oreochromis_niloticus
ENSCVAG00000007250	shrprbck1r	100	79.126	ENSORLG00000007392	shrprbck1r	100	79.126	Oryzias_latipes
ENSCVAG00000007250	shrprbck1r	60	54.206	ENSORLG00000017281	sharpin	95	54.206	Oryzias_latipes
ENSCVAG00000007250	shrprbck1r	62	53.167	ENSORLG00020000801	sharpin	98	53.167	Oryzias_latipes_hni
ENSCVAG00000007250	shrprbck1r	100	78.702	ENSORLG00020018619	shrprbck1r	100	78.702	Oryzias_latipes_hni
ENSCVAG00000007250	shrprbck1r	100	78.561	ENSORLG00015018865	shrprbck1r	100	78.561	Oryzias_latipes_hsok
ENSCVAG00000007250	shrprbck1r	60	54.098	ENSORLG00015009860	sharpin	95	54.098	Oryzias_latipes_hsok
ENSCVAG00000007250	shrprbck1r	100	80.113	ENSOMEG00000012749	shrprbck1r	100	80.113	Oryzias_melastigma
ENSCVAG00000007250	shrprbck1r	100	71.429	ENSPKIG00000006933	shrprbck1r	100	71.569	Paramormyrops_kingsleyae
ENSCVAG00000007250	shrprbck1r	65	60.341	ENSPKIG00000018308	-	95	60.554	Paramormyrops_kingsleyae
ENSCVAG00000007250	shrprbck1r	100	74.085	ENSPMGG00000013254	shrprbck1r	100	74.085	Periophthalmus_magnuspinnatus
ENSCVAG00000007250	shrprbck1r	59	53.882	ENSPFOG00000015253	sharpin	95	53.882	Poecilia_formosa
ENSCVAG00000007250	shrprbck1r	100	91.255	ENSPFOG00000004214	shrprbck1r	100	91.255	Poecilia_formosa
ENSCVAG00000007250	shrprbck1r	59	54.118	ENSPLAG00000000423	sharpin	95	54.118	Poecilia_latipinna
ENSCVAG00000007250	shrprbck1r	100	91.114	ENSPLAG00000020523	shrprbck1r	100	91.114	Poecilia_latipinna
ENSCVAG00000007250	shrprbck1r	100	88.575	ENSPMEG00000006877	shrprbck1r	100	88.575	Poecilia_mexicana
ENSCVAG00000007250	shrprbck1r	51	61.728	ENSPMEG00000023030	sharpin	89	61.728	Poecilia_mexicana
ENSCVAG00000007250	shrprbck1r	100	87.870	ENSPREG00000014689	shrprbck1r	100	87.870	Poecilia_reticulata
ENSCVAG00000007250	shrprbck1r	59	54.801	ENSPREG00000009702	sharpin	95	54.801	Poecilia_reticulata
ENSCVAG00000007250	shrprbck1r	100	79.747	ENSPNYG00000022601	shrprbck1r	100	80.450	Pundamilia_nyererei
ENSCVAG00000007250	shrprbck1r	100	68.852	ENSPNAG00000007847	shrprbck1r	100	69.210	Pygocentrus_nattereri
ENSCVAG00000007250	shrprbck1r	55	53.351	ENSPNAG00000002911	sharpin	99	53.470	Pygocentrus_nattereri
ENSCVAG00000007250	shrprbck1r	63	51.329	ENSSFOG00015004028	sharpin	99	52.410	Scleropages_formosus
ENSCVAG00000007250	shrprbck1r	75	63.977	ENSSFOG00015014150	-	96	63.858	Scleropages_formosus
ENSCVAG00000007250	shrprbck1r	100	77.051	ENSSMAG00000018085	shrprbck1r	100	77.191	Scophthalmus_maximus
ENSCVAG00000007250	shrprbck1r	100	81.408	ENSSDUG00000002959	shrprbck1r	100	81.831	Seriola_dumerili
ENSCVAG00000007250	shrprbck1r	60	43.820	ENSSDUG00000019039	sharpin	96	43.820	Seriola_dumerili
ENSCVAG00000007250	shrprbck1r	100	80.845	ENSSLDG00000009026	shrprbck1r	100	81.268	Seriola_lalandi_dorsalis
ENSCVAG00000007250	shrprbck1r	96	79.100	ENSSPAG00000016097	shrprbck1r	99	79.100	Stegastes_partitus
ENSCVAG00000007250	shrprbck1r	59	52.123	ENSTRUG00000011046	sharpin	96	52.719	Takifugu_rubripes
ENSCVAG00000007250	shrprbck1r	100	74.579	ENSTRUG00000006949	shrprbck1r	100	75.281	Takifugu_rubripes
ENSCVAG00000007250	shrprbck1r	55	53.616	ENSTNIG00000008521	sharpin	94	53.616	Tetraodon_nigroviridis
ENSCVAG00000007250	shrprbck1r	100	86.479	ENSXCOG00000006701	shrprbck1r	100	86.479	Xiphophorus_couchianus
ENSCVAG00000007250	shrprbck1r	59	41.745	ENSXCOG00000015019	sharpin	96	41.745	Xiphophorus_couchianus
ENSCVAG00000007250	shrprbck1r	59	53.066	ENSXMAG00000022076	sharpin	95	53.066	Xiphophorus_maculatus
ENSCVAG00000007250	shrprbck1r	100	86.620	ENSXMAG00000018972	shrprbck1r	100	86.620	Xiphophorus_maculatus