EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000007392 (Gene tree)
Gene ID: 107102600
Gene Symbol: CPSF7
Alias: CFIM59|FLJ12529
Full Name: cleavage and polyadenylation specific factor 7
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 8219 bases
Position: chrKL653779.1:131834-140052
Accession: 107102600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000005939	RRM_1	PF00076.22	5.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000005838	CPSF7-201	2952	XM_015401972	ENSCVAP00000005939	463 (aa)	XP_015257458	UPI0007425B00

Gene Model

Click here to download ENSCVAG00000007392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000007392	CPSF7	77	38.647	ENSCVAG00000014857	cpsf6	89	31.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007392	CPSF7	85	37.531	ENSG00000149532	CPSF7	99	41.667	Homo_sapiens
ENSCVAG00000007392	CPSF7	52	45.745	ENSG00000111605	CPSF6	87	32.037	Homo_sapiens
ENSCVAG00000007392	CPSF7	76	42.778	ENSAMEG00000016595	CPSF7	75	42.391	Ailuropoda_melanoleuca
ENSCVAG00000007392	CPSF7	66	44.521	ENSAMEG00000011781	CPSF6	66	36.041	Ailuropoda_melanoleuca
ENSCVAG00000007392	CPSF7	81	38.647	ENSACIG00000018413	cpsf6	67	34.842	Amphilophus_citrinellus
ENSCVAG00000007392	CPSF7	81	61.214	ENSAOCG00000012357	CPSF7	81	61.954	Amphiprion_ocellaris
ENSCVAG00000007392	CPSF7	81	39.487	ENSAOCG00000017865	cpsf6	79	38.498	Amphiprion_ocellaris
ENSCVAG00000007392	CPSF7	81	61.214	ENSAPEG00000015375	CPSF7	81	61.954	Amphiprion_percula
ENSCVAG00000007392	CPSF7	66	44.218	ENSACAG00000004381	CPSF6	81	37.500	Anolis_carolinensis
ENSCVAG00000007392	CPSF7	94	31.548	ENSANAG00000024635	CPSF7	84	35.545	Aotus_nancymaae
ENSCVAG00000007392	CPSF7	66	44.521	ENSANAG00000019240	CPSF6	68	35.874	Aotus_nancymaae
ENSCVAG00000007392	CPSF7	66	44.828	ENSAMXG00000016745	CPSF6	87	31.068	Astyanax_mexicanus
ENSCVAG00000007392	CPSF7	52	45.745	ENSBTAG00000007323	CPSF6	70	35.874	Bos_taurus
ENSCVAG00000007392	CPSF7	52	45.745	ENSCJAG00000001798	CPSF6	87	32.333	Callithrix_jacchus
ENSCVAG00000007392	CPSF7	66	44.521	ENSCAFG00000000424	CPSF6	90	32.471	Canis_familiaris
ENSCVAG00000007392	CPSF7	52	45.745	ENSCAFG00020016950	CPSF6	70	35.874	Canis_lupus_dingo
ENSCVAG00000007392	CPSF7	52	45.745	ENSCHIG00000010792	CPSF6	70	35.874	Capra_hircus
ENSCVAG00000007392	CPSF7	66	44.521	ENSTSYG00000008591	CPSF6	86	32.536	Carlito_syrichta
ENSCVAG00000007392	CPSF7	52	45.745	ENSCPOG00000015201	CPSF6	78	33.803	Cavia_porcellus
ENSCVAG00000007392	CPSF7	52	45.745	ENSCCAG00000028149	CPSF6	84	32.697	Cebus_capucinus
ENSCVAG00000007392	CPSF7	52	45.745	ENSCATG00000039288	CPSF6	84	32.936	Cercocebus_atys
ENSCVAG00000007392	CPSF7	66	44.521	ENSCLAG00000010149	CPSF6	77	33.962	Chinchilla_lanigera
ENSCVAG00000007392	CPSF7	94	35.366	ENSCLAG00000003174	CPSF7	86	38.626	Chinchilla_lanigera
ENSCVAG00000007392	CPSF7	51	44.521	ENSCSAG00000004232	CPSF6	66	35.874	Chlorocebus_sabaeus
ENSCVAG00000007392	CPSF7	73	41.341	ENSCPBG00000013322	CPSF6	79	38.095	Chrysemys_picta_bellii
ENSCVAG00000007392	CPSF7	66	44.521	ENSCANG00000037294	CPSF6	80	33.168	Colobus_angolensis_palliatus
ENSCVAG00000007392	CPSF7	65	44.521	ENSCGRG00001018082	Cpsf6	68	36.842	Cricetulus_griseus_chok1gshd
ENSCVAG00000007392	CPSF7	66	44.521	ENSCGRG00000016909	Cpsf6	68	36.842	Cricetulus_griseus_crigri
ENSCVAG00000007392	CPSF7	87	53.713	ENSCSEG00000001956	CPSF7	84	56.117	Cynoglossus_semilaevis
ENSCVAG00000007392	CPSF7	81	43.448	ENSCSEG00000008967	cpsf6	89	35.294	Cynoglossus_semilaevis
ENSCVAG00000007392	CPSF7	93	39.474	ENSDARG00000018618	cpsf6	79	36.946	Danio_rerio
ENSCVAG00000007392	CPSF7	52	45.745	ENSDNOG00000015292	CPSF6	67	36.842	Dasypus_novemcinctus
ENSCVAG00000007392	CPSF7	66	44.521	ENSDORG00000002950	Cpsf6	64	36.842	Dipodomys_ordii
ENSCVAG00000007392	CPSF7	95	34.600	ENSETEG00000003765	CPSF7	86	38.152	Echinops_telfairi
ENSCVAG00000007392	CPSF7	68	36.870	ENSEASG00005008196	CPSF7	86	38.915	Equus_asinus_asinus
ENSCVAG00000007392	CPSF7	52	45.745	ENSEASG00005008066	CPSF6	70	35.874	Equus_asinus_asinus
ENSCVAG00000007392	CPSF7	52	45.745	ENSECAG00000015988	CPSF6	70	35.874	Equus_caballus
ENSCVAG00000007392	CPSF7	68	37.015	ENSECAG00000018521	CPSF7	83	39.566	Equus_caballus
ENSCVAG00000007392	CPSF7	66	44.521	ENSEEUG00000015039	CPSF6	64	35.874	Erinaceus_europaeus
ENSCVAG00000007392	CPSF7	52	45.745	ENSFCAG00000002855	CPSF6	70	35.874	Felis_catus
ENSCVAG00000007392	CPSF7	59	45.745	ENSFALG00000010157	CPSF6	76	41.818	Ficedula_albicollis
ENSCVAG00000007392	CPSF7	78	39.642	ENSFALG00000011927	CPSF7	88	39.506	Ficedula_albicollis
ENSCVAG00000007392	CPSF7	52	45.745	ENSFDAG00000002281	CPSF6	74	33.962	Fukomys_damarensis
ENSCVAG00000007392	CPSF7	66	43.448	ENSFHEG00000019693	cpsf6	59	39.153	Fundulus_heteroclitus
ENSCVAG00000007392	CPSF7	94	33.803	ENSGALG00000040962	CPSF7	74	38.257	Gallus_gallus
ENSCVAG00000007392	CPSF7	73	41.341	ENSGAGG00000010228	CPSF6	76	41.818	Gopherus_agassizii
ENSCVAG00000007392	CPSF7	52	45.745	ENSGGOG00000008211	CPSF6	84	32.936	Gorilla_gorilla
ENSCVAG00000007392	CPSF7	81	39.153	ENSHBUG00000005998	cpsf6	70	36.036	Haplochromis_burtoni
ENSCVAG00000007392	CPSF7	52	45.745	ENSHGLG00000000792	CPSF6	78	33.803	Heterocephalus_glaber_female
ENSCVAG00000007392	CPSF7	52	45.745	ENSHGLG00100013861	CPSF6	77	33.962	Heterocephalus_glaber_male
ENSCVAG00000007392	CPSF7	72	43.949	ENSHCOG00000014555	cpsf6	67	35.586	Hippocampus_comes
ENSCVAG00000007392	CPSF7	66	44.521	ENSSTOG00000014133	CPSF6	69	35.874	Ictidomys_tridecemlineatus
ENSCVAG00000007392	CPSF7	66	44.521	ENSJJAG00000014647	Cpsf6	66	36.842	Jaculus_jaculus
ENSCVAG00000007392	CPSF7	81	42.308	ENSKMAG00000014794	cpsf6	78	37.915	Kryptolebias_marmoratus
ENSCVAG00000007392	CPSF7	68	42.949	ENSLBEG00000015762	cpsf6	77	36.199	Labrus_bergylta
ENSCVAG00000007392	CPSF7	81	34.762	ENSLACG00000005542	CPSF7	81	35.326	Latimeria_chalumnae
ENSCVAG00000007392	CPSF7	69	44.720	ENSLACG00000008625	CPSF6	79	36.667	Latimeria_chalumnae
ENSCVAG00000007392	CPSF7	81	45.517	ENSLOCG00000016190	cpsf6	81	30.566	Lepisosteus_oculatus
ENSCVAG00000007392	CPSF7	52	45.745	ENSLAFG00000030413	CPSF6	85	32.374	Loxodonta_africana
ENSCVAG00000007392	CPSF7	52	45.745	ENSMFAG00000045318	CPSF6	84	32.936	Macaca_fascicularis
ENSCVAG00000007392	CPSF7	52	45.745	ENSMMUG00000002921	CPSF6	84	33.017	Macaca_mulatta
ENSCVAG00000007392	CPSF7	79	36.941	ENSMNEG00000029585	CPSF7	85	39.518	Macaca_nemestrina
ENSCVAG00000007392	CPSF7	52	45.745	ENSMNEG00000036311	CPSF6	87	32.564	Macaca_nemestrina
ENSCVAG00000007392	CPSF7	66	44.521	ENSMLEG00000003957	CPSF6	80	33.168	Mandrillus_leucophaeus
ENSCVAG00000007392	CPSF7	81	39.153	ENSMAMG00000010385	cpsf6	89	35.135	Mastacembelus_armatus
ENSCVAG00000007392	CPSF7	81	39.153	ENSMZEG00005007975	cpsf6	70	36.036	Maylandia_zebra
ENSCVAG00000007392	CPSF7	69	43.529	ENSMGAG00000004876	CPSF7	69	41.538	Meleagris_gallopavo
ENSCVAG00000007392	CPSF7	52	45.745	ENSMGAG00000010552	CPSF6	80	35.426	Meleagris_gallopavo
ENSCVAG00000007392	CPSF7	52	45.745	ENSMAUG00000013240	Cpsf6	70	35.874	Mesocricetus_auratus
ENSCVAG00000007392	CPSF7	52	45.745	ENSMICG00000007385	-	87	32.564	Microcebus_murinus
ENSCVAG00000007392	CPSF7	52	45.745	ENSMOCG00000013982	Cpsf6	67	36.842	Microtus_ochrogaster
ENSCVAG00000007392	CPSF7	66	44.521	ENSMODG00000007123	CPSF6	70	35.874	Monodelphis_domestica
ENSCVAG00000007392	CPSF7	77	39.130	ENSMALG00000014908	cpsf6	62	38.816	Monopterus_albus
ENSCVAG00000007392	CPSF7	52	45.745	MGP_CAROLIEiJ_G0015834	Cpsf6	70	35.874	Mus_caroli
ENSCVAG00000007392	CPSF7	66	44.521	ENSMUSG00000055531	Cpsf6	70	35.874	Mus_musculus
ENSCVAG00000007392	CPSF7	66	44.521	MGP_SPRETEiJ_G0016657	Cpsf6	70	35.874	Mus_spretus
ENSCVAG00000007392	CPSF7	52	45.745	ENSMPUG00000017502	CPSF6	63	36.041	Mustela_putorius_furo
ENSCVAG00000007392	CPSF7	52	45.745	ENSMLUG00000004172	-	63	36.041	Myotis_lucifugus
ENSCVAG00000007392	CPSF7	82	33.586	ENSMLUG00000028728	-	86	31.888	Myotis_lucifugus
ENSCVAG00000007392	CPSF7	52	45.745	ENSNGAG00000015901	Cpsf6	67	36.842	Nannospalax_galili
ENSCVAG00000007392	CPSF7	81	39.153	ENSNBRG00000004089	cpsf6	70	36.036	Neolamprologus_brichardi
ENSCVAG00000007392	CPSF7	52	45.745	ENSNLEG00000003798	CPSF6	87	32.564	Nomascus_leucogenys
ENSCVAG00000007392	CPSF7	65	45.390	ENSMEUG00000015041	CPSF6	66	34.978	Notamacropus_eugenii
ENSCVAG00000007392	CPSF7	51	44.521	ENSOPRG00000005199	CPSF6	64	36.986	Ochotona_princeps
ENSCVAG00000007392	CPSF7	52	45.745	ENSODEG00000004418	-	83	31.059	Octodon_degus
ENSCVAG00000007392	CPSF7	55	50.000	ENSODEG00000007109	-	74	33.762	Octodon_degus
ENSCVAG00000007392	CPSF7	66	45.517	ENSODEG00000018399	-	68	36.364	Octodon_degus
ENSCVAG00000007392	CPSF7	72	44.828	ENSONIG00000011702	cpsf6	67	37.019	Oreochromis_niloticus
ENSCVAG00000007392	CPSF7	52	45.745	ENSOANG00000005944	CPSF6	55	57.971	Ornithorhynchus_anatinus
ENSCVAG00000007392	CPSF7	59	46.341	ENSOCUG00000024726	CPSF7	86	38.863	Oryctolagus_cuniculus
ENSCVAG00000007392	CPSF7	51	44.521	ENSOCUG00000013505	CPSF6	66	35.874	Oryctolagus_cuniculus
ENSCVAG00000007392	CPSF7	99	50.424	ENSORLG00000006495	CPSF7	86	55.138	Oryzias_latipes
ENSCVAG00000007392	CPSF7	81	38.624	ENSORLG00000013893	cpsf6	69	34.842	Oryzias_latipes
ENSCVAG00000007392	CPSF7	81	38.624	ENSORLG00020016593	cpsf6	69	34.842	Oryzias_latipes_hni
ENSCVAG00000007392	CPSF7	99	50.424	ENSORLG00020012657	CPSF7	86	55.138	Oryzias_latipes_hni
ENSCVAG00000007392	CPSF7	99	50.424	ENSORLG00015011091	CPSF7	86	55.138	Oryzias_latipes_hsok
ENSCVAG00000007392	CPSF7	81	38.624	ENSORLG00015015558	cpsf6	69	34.842	Oryzias_latipes_hsok
ENSCVAG00000007392	CPSF7	98	54.371	ENSOMEG00000000539	CPSF7	86	56.456	Oryzias_melastigma
ENSCVAG00000007392	CPSF7	81	43.448	ENSOMEG00000009425	cpsf6	67	35.749	Oryzias_melastigma
ENSCVAG00000007392	CPSF7	66	41.096	ENSOGAG00000031988	CPSF6	65	36.041	Otolemur_garnettii
ENSCVAG00000007392	CPSF7	66	44.521	ENSOARG00000020532	CPSF6	62	41.818	Ovis_aries
ENSCVAG00000007392	CPSF7	76	43.429	ENSOARG00000012937	CPSF7	67	43.429	Ovis_aries
ENSCVAG00000007392	CPSF7	66	44.521	ENSPPAG00000005301	CPSF6	59	39.175	Pan_paniscus
ENSCVAG00000007392	CPSF7	95	33.002	ENSPPRG00000008538	CPSF7	86	37.915	Panthera_pardus
ENSCVAG00000007392	CPSF7	52	45.745	ENSPPRG00000021620	CPSF6	70	35.874	Panthera_pardus
ENSCVAG00000007392	CPSF7	51	44.521	ENSPTIG00000004079	CPSF6	66	41.818	Panthera_tigris_altaica
ENSCVAG00000007392	CPSF7	52	45.745	ENSPTRG00000005205	CPSF6	84	32.936	Pan_troglodytes
ENSCVAG00000007392	CPSF7	52	45.745	ENSPANG00000011641	CPSF6	84	32.936	Papio_anubis
ENSCVAG00000007392	CPSF7	66	44.138	ENSPKIG00000022613	CPSF6	70	35.321	Paramormyrops_kingsleyae
ENSCVAG00000007392	CPSF7	72	41.892	ENSPKIG00000003081	-	67	36.275	Paramormyrops_kingsleyae
ENSCVAG00000007392	CPSF7	81	47.644	ENSPKIG00000018054	CPSF7	88	42.822	Paramormyrops_kingsleyae
ENSCVAG00000007392	CPSF7	61	42.727	ENSPSIG00000016360	CPSF6	96	31.185	Pelodiscus_sinensis
ENSCVAG00000007392	CPSF7	66	44.521	ENSPEMG00000007973	Cpsf6	66	36.842	Peromyscus_maniculatus_bairdii
ENSCVAG00000007392	CPSF7	52	43.243	ENSPMAG00000000657	cpsf6	68	38.830	Petromyzon_marinus
ENSCVAG00000007392	CPSF7	66	44.521	ENSPCIG00000019063	CPSF6	70	35.874	Phascolarctos_cinereus
ENSCVAG00000007392	CPSF7	66	43.836	ENSPLAG00000005715	cpsf6	62	39.153	Poecilia_latipinna
ENSCVAG00000007392	CPSF7	66	43.448	ENSPMEG00000001353	cpsf6	64	37.864	Poecilia_mexicana
ENSCVAG00000007392	CPSF7	66	43.448	ENSPREG00000004417	cpsf6	66	37.864	Poecilia_reticulata
ENSCVAG00000007392	CPSF7	52	45.745	ENSPPYG00000004756	CPSF6	70	35.874	Pongo_abelii
ENSCVAG00000007392	CPSF7	51	44.521	ENSPCAG00000011574	CPSF6	66	35.874	Procavia_capensis
ENSCVAG00000007392	CPSF7	52	45.745	ENSPCOG00000024384	CPSF6	84	32.697	Propithecus_coquereli
ENSCVAG00000007392	CPSF7	51	44.521	ENSPVAG00000015753	CPSF6	66	36.036	Pteropus_vampyrus
ENSCVAG00000007392	CPSF7	66	44.828	ENSPNAG00000024098	CPSF6	67	37.264	Pygocentrus_nattereri
ENSCVAG00000007392	CPSF7	52	45.745	ENSRNOG00000005927	Cpsf6	70	35.874	Rattus_norvegicus
ENSCVAG00000007392	CPSF7	66	44.521	ENSRBIG00000042827	CPSF6	84	32.936	Rhinopithecus_bieti
ENSCVAG00000007392	CPSF7	66	44.521	ENSRROG00000042758	CPSF6	87	32.564	Rhinopithecus_roxellana
ENSCVAG00000007392	CPSF7	66	44.521	ENSSBOG00000010652	CPSF6	81	33.168	Saimiri_boliviensis_boliviensis
ENSCVAG00000007392	CPSF7	66	42.282	ENSSHAG00000006635	CPSF6	64	35.922	Sarcophilus_harrisii
ENSCVAG00000007392	CPSF7	100	42.029	ENSSFOG00015010288	cpsf7	88	44.612	Scleropages_formosus
ENSCVAG00000007392	CPSF7	81	38.830	ENSSFOG00015001688	CPSF6	71	33.937	Scleropages_formosus
ENSCVAG00000007392	CPSF7	81	44.521	ENSSFOG00015015803	CPSF6	83	37.619	Scleropages_formosus
ENSCVAG00000007392	CPSF7	68	42.949	ENSSMAG00000000471	cpsf6	74	38.605	Scophthalmus_maximus
ENSCVAG00000007392	CPSF7	81	39.153	ENSSDUG00000005024	cpsf6	70	35.586	Seriola_dumerili
ENSCVAG00000007392	CPSF7	81	39.153	ENSSLDG00000009042	cpsf6	70	35.586	Seriola_lalandi_dorsalis
ENSCVAG00000007392	CPSF7	52	45.745	ENSSARG00000006743	CPSF6	63	37.561	Sorex_araneus
ENSCVAG00000007392	CPSF7	70	43.293	ENSSPUG00000001238	CPSF6	90	38.095	Sphenodon_punctatus
ENSCVAG00000007392	CPSF7	81	42.949	ENSSPAG00000013906	cpsf6	67	38.498	Stegastes_partitus
ENSCVAG00000007392	CPSF7	52	45.745	ENSSSCG00000038031	CPSF6	70	35.874	Sus_scrofa
ENSCVAG00000007392	CPSF7	81	43.448	ENSTRUG00000016461	cpsf6	70	33.636	Takifugu_rubripes
ENSCVAG00000007392	CPSF7	66	43.448	ENSTNIG00000007576	cpsf6	63	38.021	Tetraodon_nigroviridis
ENSCVAG00000007392	CPSF7	90	34.304	ENSUAMG00000017809	CPSF7	86	38.915	Ursus_americanus
ENSCVAG00000007392	CPSF7	51	44.521	ENSUAMG00000023492	CPSF6	66	41.818	Ursus_americanus
ENSCVAG00000007392	CPSF7	90	34.958	ENSUMAG00000011825	CPSF7	85	39.759	Ursus_maritimus
ENSCVAG00000007392	CPSF7	66	44.521	ENSUMAG00000020779	CPSF6	82	31.688	Ursus_maritimus
ENSCVAG00000007392	CPSF7	66	44.521	ENSVPAG00000008469	CPSF6	64	35.874	Vicugna_pacos
ENSCVAG00000007392	CPSF7	51	44.521	ENSVVUG00000010156	-	62	41.818	Vulpes_vulpes
ENSCVAG00000007392	CPSF7	62	43.333	ENSXETG00000006715	cpsf7	86	31.034	Xenopus_tropicalis
ENSCVAG00000007392	CPSF7	76	43.448	ENSXCOG00000013423	cpsf6	62	39.153	Xiphophorus_couchianus
ENSCVAG00000007392	CPSF7	76	43.448	ENSXMAG00000003459	cpsf6	58	39.153	Xiphophorus_maculatus