EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000007562 (Gene tree)
Gene ID: 107086471
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 13827 bases
Position: chrKL652654.1:304960-318786
Accession: 107086471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000006077	MA3	PF02847.17	4.5e-22	1	1
ENSCVAP00000006077	MIF4G	PF02854.19	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000005602	-	2979	XM_015377440	ENSCVAP00000006077	835 (aa)	XP_015232926	UPI0007425A27

Gene Model

Click here to download ENSCVAG00000007562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007562's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007562	nom1	97	54.545	ENSG00000146909	NOM1	97	54.567	Homo_sapiens
ENSCVAG00000007562	nom1	64	87.406	ENSAPOG00000012073	nom1	98	73.081	Acanthochromis_polyacanthus
ENSCVAG00000007562	nom1	81	57.902	ENSAMEG00000001412	NOM1	96	58.924	Ailuropoda_melanoleuca
ENSCVAG00000007562	nom1	98	71.602	ENSACIG00000018050	nom1	98	71.966	Amphilophus_citrinellus
ENSCVAG00000007562	nom1	64	86.654	ENSAOCG00000006229	nom1	98	72.255	Amphiprion_ocellaris
ENSCVAG00000007562	nom1	64	86.842	ENSAPEG00000015994	nom1	98	72.749	Amphiprion_percula
ENSCVAG00000007562	nom1	98	74.334	ENSATEG00000005405	nom1	98	74.455	Anabas_testudineus
ENSCVAG00000007562	nom1	79	59.549	ENSAPLG00000006585	NOM1	98	60.514	Anas_platyrhynchos
ENSCVAG00000007562	nom1	79	56.459	ENSACAG00000011192	NOM1	97	51.572	Anolis_carolinensis
ENSCVAG00000007562	nom1	98	72.010	ENSACLG00000000033	nom1	98	73.697	Astatotilapia_calliptera
ENSCVAG00000007562	nom1	64	74.953	ENSAMXG00000041486	nom1	98	59.485	Astyanax_mexicanus
ENSCVAG00000007562	nom1	97	52.593	ENSBTAG00000016435	NOM1	96	52.103	Bos_taurus
ENSCVAG00000007562	nom1	98	54.765	ENSCJAG00000004336	NOM1	95	54.893	Callithrix_jacchus
ENSCVAG00000007562	nom1	56	41.400	ENSCAFG00000029845	-	93	41.785	Canis_familiaris
ENSCVAG00000007562	nom1	97	51.909	ENSCAFG00020005121	NOM1	95	52.455	Canis_lupus_dingo
ENSCVAG00000007562	nom1	81	57.910	ENSCHIG00000020102	NOM1	96	51.804	Capra_hircus
ENSCVAG00000007562	nom1	96	54.945	ENSTSYG00000000227	NOM1	97	53.508	Carlito_syrichta
ENSCVAG00000007562	nom1	62	69.482	ENSCAPG00000016273	NOM1	99	69.482	Cavia_aperea
ENSCVAG00000007562	nom1	99	50.816	ENSCPOG00000025538	NOM1	96	51.483	Cavia_porcellus
ENSCVAG00000007562	nom1	73	68.095	ENSCCAG00000014944	NOM1	99	67.898	Cebus_capucinus
ENSCVAG00000007562	nom1	86	56.258	ENSCLAG00000000267	NOM1	80	58.908	Chinchilla_lanigera
ENSCVAG00000007562	nom1	70	68.362	ENSCPBG00000018215	NOM1	84	68.491	Chrysemys_picta_bellii
ENSCVAG00000007562	nom1	87	36.474	ENSCING00000005248	-	91	37.787	Ciona_intestinalis
ENSCVAG00000007562	nom1	62	68.199	ENSCANG00000041984	NOM1	89	68.199	Colobus_angolensis_palliatus
ENSCVAG00000007562	nom1	81	59.444	ENSCGRG00001020293	Nom1	96	54.112	Cricetulus_griseus_chok1gshd
ENSCVAG00000007562	nom1	63	67.742	ENSCGRG00000005405	Nom1	99	67.742	Cricetulus_griseus_crigri
ENSCVAG00000007562	nom1	94	67.293	ENSCSEG00000000932	nom1	94	67.125	Cynoglossus_semilaevis
ENSCVAG00000007562	nom1	99	60.116	ENSDARG00000060027	nom1	100	75.770	Danio_rerio
ENSCVAG00000007562	nom1	63	56.877	ENSDORG00000015682	Nom1	99	50.989	Dipodomys_ordii
ENSCVAG00000007562	nom1	80	36.182	FBgn0035336	CG9004	77	36.377	Drosophila_melanogaster
ENSCVAG00000007562	nom1	77	58.294	ENSETEG00000003104	NOM1	88	58.353	Echinops_telfairi
ENSCVAG00000007562	nom1	52	50.114	ENSEBUG00000010077	nom1	96	50.114	Eptatretus_burgeri
ENSCVAG00000007562	nom1	81	59.682	ENSEASG00005001489	NOM1	95	54.881	Equus_asinus_asinus
ENSCVAG00000007562	nom1	64	67.283	ENSECAG00000007596	NOM1	89	54.621	Equus_caballus
ENSCVAG00000007562	nom1	66	77.858	ENSELUG00000006266	nom1	98	65.042	Esox_lucius
ENSCVAG00000007562	nom1	97	52.774	ENSFCAG00000006467	NOM1	95	52.392	Felis_catus
ENSCVAG00000007562	nom1	81	58.806	ENSFALG00000006904	NOM1	99	59.490	Ficedula_albicollis
ENSCVAG00000007562	nom1	99	52.108	ENSFDAG00000016241	NOM1	98	53.301	Fukomys_damarensis
ENSCVAG00000007562	nom1	100	79.857	ENSFHEG00000015974	nom1	100	79.976	Fundulus_heteroclitus
ENSCVAG00000007562	nom1	94	58.604	ENSGMOG00000005129	nom1	99	59.755	Gadus_morhua
ENSCVAG00000007562	nom1	88	55.898	ENSGALG00000006437	NOM1	92	52.387	Gallus_gallus
ENSCVAG00000007562	nom1	100	80.143	ENSGAFG00000003211	nom1	100	80.262	Gambusia_affinis
ENSCVAG00000007562	nom1	82	58.429	ENSGAGG00000014347	NOM1	97	53.059	Gopherus_agassizii
ENSCVAG00000007562	nom1	65	66.667	ENSGGOG00000010920	NOM1	89	54.172	Gorilla_gorilla
ENSCVAG00000007562	nom1	98	72.242	ENSHBUG00000014616	nom1	98	72.934	Haplochromis_burtoni
ENSCVAG00000007562	nom1	98	53.647	ENSHGLG00000007392	NOM1	97	53.349	Heterocephalus_glaber_female
ENSCVAG00000007562	nom1	86	68.471	ENSHGLG00100014407	NOM1	96	68.471	Heterocephalus_glaber_male
ENSCVAG00000007562	nom1	63	71.348	ENSIPUG00000013980	nom1	98	58.604	Ictalurus_punctatus
ENSCVAG00000007562	nom1	65	66.362	ENSSTOG00000031736	NOM1	95	66.362	Ictidomys_tridecemlineatus
ENSCVAG00000007562	nom1	58	69.405	ENSJJAG00000011716	Nom1	98	69.405	Jaculus_jaculus
ENSCVAG00000007562	nom1	100	68.914	ENSLBEG00000009252	nom1	100	70.534	Labrus_bergylta
ENSCVAG00000007562	nom1	83	61.946	ENSLACG00000011777	NOM1	95	57.072	Latimeria_chalumnae
ENSCVAG00000007562	nom1	98	63.603	ENSLOCG00000012452	nom1	100	63.228	Lepisosteus_oculatus
ENSCVAG00000007562	nom1	97	48.507	ENSLAFG00000007119	NOM1	98	48.467	Loxodonta_africana
ENSCVAG00000007562	nom1	97	51.059	ENSMMUG00000039033	NOM1	95	51.934	Macaca_mulatta
ENSCVAG00000007562	nom1	62	68.654	ENSMLEG00000037062	NOM1	98	68.654	Mandrillus_leucophaeus
ENSCVAG00000007562	nom1	98	71.953	ENSMAMG00000004118	nom1	98	71.957	Mastacembelus_armatus
ENSCVAG00000007562	nom1	98	72.694	ENSMZEG00005000384	nom1	98	73.455	Maylandia_zebra
ENSCVAG00000007562	nom1	83	58.262	ENSMGAG00000005051	NOM1	99	58.251	Meleagris_gallopavo
ENSCVAG00000007562	nom1	97	54.358	ENSMAUG00000017988	Nom1	95	55.327	Mesocricetus_auratus
ENSCVAG00000007562	nom1	63	66.855	ENSMICG00000017531	NOM1	96	53.976	Microcebus_murinus
ENSCVAG00000007562	nom1	98	52.656	ENSMOCG00000015962	Nom1	95	53.690	Microtus_ochrogaster
ENSCVAG00000007562	nom1	99	65.063	ENSMMOG00000004419	nom1	98	66.904	Mola_mola
ENSCVAG00000007562	nom1	65	68.498	ENSMODG00000005177	NOM1	97	55.370	Monodelphis_domestica
ENSCVAG00000007562	nom1	93	71.046	ENSMALG00000008800	nom1	98	69.105	Monopterus_albus
ENSCVAG00000007562	nom1	97	52.764	MGP_CAROLIEiJ_G0027043	Nom1	94	53.230	Mus_caroli
ENSCVAG00000007562	nom1	97	52.398	ENSMUSG00000001569	Nom1	94	53.110	Mus_musculus
ENSCVAG00000007562	nom1	97	52.751	MGP_SPRETEiJ_G0028039	Nom1	94	52.983	Mus_spretus
ENSCVAG00000007562	nom1	81	56.894	ENSMPUG00000009745	NOM1	99	57.532	Mustela_putorius_furo
ENSCVAG00000007562	nom1	70	61.474	ENSMLUG00000009129	NOM1	93	64.539	Myotis_lucifugus
ENSCVAG00000007562	nom1	98	72.551	ENSNBRG00000016429	nom1	95	85.417	Neolamprologus_brichardi
ENSCVAG00000007562	nom1	65	64.954	ENSNLEG00000000238	NOM1	97	53.381	Nomascus_leucogenys
ENSCVAG00000007562	nom1	53	70.260	ENSMEUG00000001108	NOM1	84	54.749	Notamacropus_eugenii
ENSCVAG00000007562	nom1	52	57.576	ENSOPRG00000014676	NOM1	87	46.763	Ochotona_princeps
ENSCVAG00000007562	nom1	81	58.755	ENSODEG00000009399	NOM1	98	58.621	Octodon_degus
ENSCVAG00000007562	nom1	94	74.716	ENSONIG00000005958	nom1	99	75.032	Oreochromis_niloticus
ENSCVAG00000007562	nom1	55	68.898	ENSOANG00000006139	-	97	68.898	Ornithorhynchus_anatinus
ENSCVAG00000007562	nom1	97	54.862	ENSOCUG00000004071	-	97	54.108	Oryctolagus_cuniculus
ENSCVAG00000007562	nom1	96	45.074	ENSOCUG00000021448	-	95	53.382	Oryctolagus_cuniculus
ENSCVAG00000007562	nom1	99	71.871	ENSORLG00000010541	nom1	98	71.890	Oryzias_latipes
ENSCVAG00000007562	nom1	93	72.983	ENSORLG00020010789	nom1	100	72.624	Oryzias_latipes_hni
ENSCVAG00000007562	nom1	100	71.599	ENSORLG00015010475	nom1	100	72.335	Oryzias_latipes_hsok
ENSCVAG00000007562	nom1	99	71.581	ENSOMEG00000004219	nom1	98	71.344	Oryzias_melastigma
ENSCVAG00000007562	nom1	70	64.189	ENSOGAG00000001124	NOM1	89	67.890	Otolemur_garnettii
ENSCVAG00000007562	nom1	81	57.329	ENSOARG00000007261	NOM1	93	56.802	Ovis_aries
ENSCVAG00000007562	nom1	97	53.059	ENSPPAG00000041374	NOM1	97	54.621	Pan_paniscus
ENSCVAG00000007562	nom1	65	65.631	ENSPTIG00000013532	NOM1	94	58.732	Panthera_tigris_altaica
ENSCVAG00000007562	nom1	97	54.545	ENSPTRG00000019917	NOM1	97	54.621	Pan_troglodytes
ENSCVAG00000007562	nom1	97	55.018	ENSPANG00000007605	NOM1	95	54.742	Papio_anubis
ENSCVAG00000007562	nom1	99	58.968	ENSPKIG00000005825	nom1	98	58.859	Paramormyrops_kingsleyae
ENSCVAG00000007562	nom1	64	68.015	ENSPSIG00000017848	NOM1	90	68.015	Pelodiscus_sinensis
ENSCVAG00000007562	nom1	98	71.308	ENSPMGG00000002577	nom1	98	71.636	Periophthalmus_magnuspinnatus
ENSCVAG00000007562	nom1	97	53.728	ENSPEMG00000024180	Nom1	95	53.991	Peromyscus_maniculatus_bairdii
ENSCVAG00000007562	nom1	65	68.132	ENSPCIG00000027941	NOM1	93	54.726	Phascolarctos_cinereus
ENSCVAG00000007562	nom1	100	80.355	ENSPFOG00000015771	nom1	100	80.664	Poecilia_formosa
ENSCVAG00000007562	nom1	64	90.130	ENSPLAG00000007856	nom1	100	80.024	Poecilia_latipinna
ENSCVAG00000007562	nom1	100	80.118	ENSPMEG00000014155	nom1	100	80.664	Poecilia_mexicana
ENSCVAG00000007562	nom1	100	80.119	ENSPREG00000008850	nom1	100	80.641	Poecilia_reticulata
ENSCVAG00000007562	nom1	97	51.152	ENSPPYG00000018222	NOM1	96	50.059	Pongo_abelii
ENSCVAG00000007562	nom1	73	63.023	ENSPCAG00000000440	NOM1	80	63.023	Procavia_capensis
ENSCVAG00000007562	nom1	62	67.562	ENSPCOG00000015222	NOM1	98	67.562	Propithecus_coquereli
ENSCVAG00000007562	nom1	97	52.038	ENSPVAG00000014760	NOM1	95	52.375	Pteropus_vampyrus
ENSCVAG00000007562	nom1	98	72.573	ENSPNYG00000006975	nom1	97	84.112	Pundamilia_nyererei
ENSCVAG00000007562	nom1	66	71.143	ENSPNAG00000011085	nom1	80	64.706	Pygocentrus_nattereri
ENSCVAG00000007562	nom1	97	50.719	ENSRNOG00000048969	AABR07059041.1	99	51.087	Rattus_norvegicus
ENSCVAG00000007562	nom1	97	54.578	ENSRBIG00000037042	NOM1	95	54.808	Rhinopithecus_bieti
ENSCVAG00000007562	nom1	97	54.578	ENSRROG00000037293	NOM1	95	54.808	Rhinopithecus_roxellana
ENSCVAG00000007562	nom1	69	64.948	ENSSHAG00000017998	-	99	60.142	Sarcophilus_harrisii
ENSCVAG00000007562	nom1	58	72.016	ENSSFOG00015003196	nom1	100	72.016	Scleropages_formosus
ENSCVAG00000007562	nom1	99	71.412	ENSSMAG00000011047	nom1	98	71.801	Scophthalmus_maximus
ENSCVAG00000007562	nom1	100	72.358	ENSSDUG00000006834	nom1	100	72.897	Seriola_dumerili
ENSCVAG00000007562	nom1	100	71.529	ENSSLDG00000021812	nom1	100	72.706	Seriola_lalandi_dorsalis
ENSCVAG00000007562	nom1	86	47.197	ENSSPUG00000002556	NOM1	90	68.571	Sphenodon_punctatus
ENSCVAG00000007562	nom1	100	72.449	ENSSPAG00000000953	nom1	100	74.913	Stegastes_partitus
ENSCVAG00000007562	nom1	81	57.730	ENSTGUG00000000702	-	99	57.703	Taeniopygia_guttata
ENSCVAG00000007562	nom1	98	69.128	ENSTRUG00000010239	nom1	98	68.712	Takifugu_rubripes
ENSCVAG00000007562	nom1	98	68.171	ENSTNIG00000012783	nom1	100	66.423	Tetraodon_nigroviridis
ENSCVAG00000007562	nom1	97	53.791	ENSTTRG00000009691	NOM1	96	53.166	Tursiops_truncatus
ENSCVAG00000007562	nom1	97	52.719	ENSUAMG00000025450	NOM1	95	53.929	Ursus_americanus
ENSCVAG00000007562	nom1	82	58.143	ENSUMAG00000014275	NOM1	96	58.561	Ursus_maritimus
ENSCVAG00000007562	nom1	78	67.742	ENSVVUG00000002608	NOM1	95	67.742	Vulpes_vulpes
ENSCVAG00000007562	nom1	88	55.249	ENSXETG00000021611	nom1	82	75.122	Xenopus_tropicalis
ENSCVAG00000007562	nom1	100	80.523	ENSXMAG00000002451	nom1	100	80.523	Xiphophorus_maculatus