EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000007611 (Gene tree)
Gene ID: 107082641
Gene Symbol: polr3f
Alias: zgc:56299|zgc:76983
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 13612 bases
Position: chrKL652558.1:25601-39212
Accession: 107082641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000023909	RNA_pol_Rpc34	PF05158.12	1.6e-98	1	1
ENSCVAP00000006099	RNA_pol_Rpc34	PF05158.12	8.2e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000005562	-	927	-	ENSCVAP00000006099	308 (aa)	-	-
ENSCVAT00000005541	-	1827	XM_015371425	ENSCVAP00000023909	316 (aa)	XP_015226911	UPI0007425CAA

Gene Model

Click here to download ENSCVAG00000007611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007611	polr3f	100	85.759	ENSG00000132664	POLR3F	100	85.759	Homo_sapiens
ENSCVAG00000007611	polr3f	100	93.987	ENSAPOG00000008271	polr3f	100	93.987	Acanthochromis_polyacanthus
ENSCVAG00000007611	polr3f	100	85.443	ENSAMEG00000005222	POLR3F	100	85.443	Ailuropoda_melanoleuca
ENSCVAG00000007611	polr3f	100	90.260	ENSACIG00000006705	polr3f	100	90.260	Amphilophus_citrinellus
ENSCVAG00000007611	polr3f	100	93.987	ENSAOCG00000000687	polr3f	100	93.987	Amphiprion_ocellaris
ENSCVAG00000007611	polr3f	100	93.671	ENSAPEG00000015263	polr3f	100	93.671	Amphiprion_percula
ENSCVAG00000007611	polr3f	87	94.545	ENSATEG00000015539	polr3f	100	94.545	Anabas_testudineus
ENSCVAG00000007611	polr3f	87	87.636	ENSAPLG00000005533	POLR3F	100	87.636	Anas_platyrhynchos
ENSCVAG00000007611	polr3f	97	84.416	ENSACAG00000014293	POLR3F	99	84.416	Anolis_carolinensis
ENSCVAG00000007611	polr3f	100	86.076	ENSANAG00000026726	POLR3F	100	86.076	Aotus_nancymaae
ENSCVAG00000007611	polr3f	100	94.620	ENSACLG00000003615	polr3f	100	94.620	Astatotilapia_calliptera
ENSCVAG00000007611	polr3f	100	89.557	ENSAMXG00000036020	polr3f	100	89.557	Astyanax_mexicanus
ENSCVAG00000007611	polr3f	100	85.127	ENSBTAG00000008825	POLR3F	100	85.127	Bos_taurus
ENSCVAG00000007611	polr3f	95	33.667	WBGene00021112	W09C3.4	95	33.893	Caenorhabditis_elegans
ENSCVAG00000007611	polr3f	100	86.076	ENSCJAG00000005159	POLR3F	100	86.076	Callithrix_jacchus
ENSCVAG00000007611	polr3f	100	85.127	ENSCAFG00000005420	POLR3F	100	85.127	Canis_familiaris
ENSCVAG00000007611	polr3f	100	85.127	ENSCAFG00020027500	POLR3F	100	85.127	Canis_lupus_dingo
ENSCVAG00000007611	polr3f	100	85.127	ENSCHIG00000014743	POLR3F	100	85.127	Capra_hircus
ENSCVAG00000007611	polr3f	100	85.127	ENSTSYG00000004207	POLR3F	100	85.127	Carlito_syrichta
ENSCVAG00000007611	polr3f	81	70.130	ENSCAPG00000008423	POLR3F	100	70.130	Cavia_aperea
ENSCVAG00000007611	polr3f	100	85.443	ENSCPOG00000002400	POLR3F	100	85.443	Cavia_porcellus
ENSCVAG00000007611	polr3f	100	76.582	ENSCCAG00000021800	POLR3F	100	76.582	Cebus_capucinus
ENSCVAG00000007611	polr3f	100	85.443	ENSCATG00000019507	POLR3F	100	85.443	Cercocebus_atys
ENSCVAG00000007611	polr3f	100	85.759	ENSCLAG00000016296	POLR3F	100	85.759	Chinchilla_lanigera
ENSCVAG00000007611	polr3f	100	85.443	ENSCSAG00000011513	POLR3F	100	85.443	Chlorocebus_sabaeus
ENSCVAG00000007611	polr3f	73	83.217	ENSCHOG00000013268	POLR3F	73	83.217	Choloepus_hoffmanni
ENSCVAG00000007611	polr3f	87	87.273	ENSCPBG00000023473	POLR3F	100	87.273	Chrysemys_picta_bellii
ENSCVAG00000007611	polr3f	99	58.228	ENSCING00000001212	-	99	58.228	Ciona_intestinalis
ENSCVAG00000007611	polr3f	71	58.667	ENSCSAVG00000003340	-	96	63.314	Ciona_savignyi
ENSCVAG00000007611	polr3f	92	85.911	ENSCANG00000037390	POLR3F	100	85.911	Colobus_angolensis_palliatus
ENSCVAG00000007611	polr3f	100	85.759	ENSCGRG00001002032	Polr3f	100	85.759	Cricetulus_griseus_chok1gshd
ENSCVAG00000007611	polr3f	100	85.759	ENSCGRG00000010852	Polr3f	100	85.759	Cricetulus_griseus_crigri
ENSCVAG00000007611	polr3f	100	89.873	ENSCSEG00000001247	polr3f	100	89.873	Cynoglossus_semilaevis
ENSCVAG00000007611	polr3f	100	89.557	ENSDARG00000012572	polr3f	100	89.557	Danio_rerio
ENSCVAG00000007611	polr3f	100	82.911	ENSDNOG00000010719	POLR3F	100	82.911	Dasypus_novemcinctus
ENSCVAG00000007611	polr3f	100	85.759	ENSDORG00000016352	Polr3f	100	85.759	Dipodomys_ordii
ENSCVAG00000007611	polr3f	95	50.667	FBgn0038951	CG5380	99	50.667	Drosophila_melanogaster
ENSCVAG00000007611	polr3f	88	51.613	ENSETEG00000015485	-	99	51.613	Echinops_telfairi
ENSCVAG00000007611	polr3f	100	76.582	ENSEBUG00000006783	polr3f	100	76.582	Eptatretus_burgeri
ENSCVAG00000007611	polr3f	100	85.759	ENSEASG00005002022	POLR3F	100	85.759	Equus_asinus_asinus
ENSCVAG00000007611	polr3f	100	85.759	ENSECAG00000009920	POLR3F	100	85.759	Equus_caballus
ENSCVAG00000007611	polr3f	80	76.000	ENSEEUG00000000184	POLR3F	80	76.000	Erinaceus_europaeus
ENSCVAG00000007611	polr3f	100	89.873	ENSELUG00000001558	polr3f	100	89.873	Esox_lucius
ENSCVAG00000007611	polr3f	100	85.443	ENSFCAG00000013828	POLR3F	100	85.443	Felis_catus
ENSCVAG00000007611	polr3f	87	88.364	ENSFALG00000007623	POLR3F	100	88.364	Ficedula_albicollis
ENSCVAG00000007611	polr3f	100	85.127	ENSFDAG00000002528	POLR3F	100	85.127	Fukomys_damarensis
ENSCVAG00000007611	polr3f	100	94.937	ENSFHEG00000006450	polr3f	100	94.937	Fundulus_heteroclitus
ENSCVAG00000007611	polr3f	100	85.443	ENSGALG00000008749	POLR3F	100	85.443	Gallus_gallus
ENSCVAG00000007611	polr3f	100	96.203	ENSGAFG00000003698	polr3f	100	96.203	Gambusia_affinis
ENSCVAG00000007611	polr3f	100	85.759	ENSGAGG00000006151	POLR3F	100	85.759	Gopherus_agassizii
ENSCVAG00000007611	polr3f	100	85.759	ENSGGOG00000011543	POLR3F	100	85.759	Gorilla_gorilla
ENSCVAG00000007611	polr3f	100	94.620	ENSHBUG00000013806	polr3f	100	94.620	Haplochromis_burtoni
ENSCVAG00000007611	polr3f	100	84.810	ENSHGLG00000011867	POLR3F	100	84.810	Heterocephalus_glaber_female
ENSCVAG00000007611	polr3f	100	84.810	ENSHGLG00100012577	POLR3F	100	84.810	Heterocephalus_glaber_male
ENSCVAG00000007611	polr3f	100	82.911	ENSHCOG00000011751	polr3f	100	82.911	Hippocampus_comes
ENSCVAG00000007611	polr3f	100	89.873	ENSIPUG00000013347	polr3f	100	89.873	Ictalurus_punctatus
ENSCVAG00000007611	polr3f	100	85.443	ENSSTOG00000013588	POLR3F	100	85.443	Ictidomys_tridecemlineatus
ENSCVAG00000007611	polr3f	100	85.443	ENSJJAG00000017513	Polr3f	100	85.443	Jaculus_jaculus
ENSCVAG00000007611	polr3f	87	89.888	ENSKMAG00000016495	polr3f	100	89.888	Kryptolebias_marmoratus
ENSCVAG00000007611	polr3f	75	95.259	ENSLBEG00000011998	polr3f	100	95.259	Labrus_bergylta
ENSCVAG00000007611	polr3f	100	84.494	ENSLACG00000009371	POLR3F	100	84.494	Latimeria_chalumnae
ENSCVAG00000007611	polr3f	100	88.924	ENSLOCG00000015701	polr3f	100	88.924	Lepisosteus_oculatus
ENSCVAG00000007611	polr3f	100	85.127	ENSLAFG00000004929	POLR3F	100	85.127	Loxodonta_africana
ENSCVAG00000007611	polr3f	100	85.443	ENSMFAG00000002227	POLR3F	100	85.443	Macaca_fascicularis
ENSCVAG00000007611	polr3f	87	87.636	ENSMMUG00000004143	POLR3F	100	87.636	Macaca_mulatta
ENSCVAG00000007611	polr3f	100	85.443	ENSMNEG00000033404	POLR3F	100	85.443	Macaca_nemestrina
ENSCVAG00000007611	polr3f	100	85.443	ENSMLEG00000021905	POLR3F	100	85.443	Mandrillus_leucophaeus
ENSCVAG00000007611	polr3f	100	92.722	ENSMAMG00000017975	polr3f	100	92.722	Mastacembelus_armatus
ENSCVAG00000007611	polr3f	100	94.304	ENSMZEG00005015134	polr3f	100	94.304	Maylandia_zebra
ENSCVAG00000007611	polr3f	100	85.759	ENSMGAG00000006691	POLR3F	100	85.759	Meleagris_gallopavo
ENSCVAG00000007611	polr3f	100	85.443	ENSMAUG00000020176	Polr3f	100	85.443	Mesocricetus_auratus
ENSCVAG00000007611	polr3f	100	85.443	ENSMICG00000044519	POLR3F	100	85.443	Microcebus_murinus
ENSCVAG00000007611	polr3f	100	85.759	ENSMOCG00000018352	Polr3f	100	85.759	Microtus_ochrogaster
ENSCVAG00000007611	polr3f	93	92.593	ENSMMOG00000018477	polr3f	100	92.593	Mola_mola
ENSCVAG00000007611	polr3f	100	84.494	ENSMODG00000005624	POLR3F	100	84.494	Monodelphis_domestica
ENSCVAG00000007611	polr3f	100	92.722	ENSMALG00000006685	polr3f	100	92.722	Monopterus_albus
ENSCVAG00000007611	polr3f	100	85.443	MGP_CAROLIEiJ_G0024385	Polr3f	100	85.443	Mus_caroli
ENSCVAG00000007611	polr3f	100	85.443	ENSMUSG00000027427	Polr3f	100	85.443	Mus_musculus
ENSCVAG00000007611	polr3f	100	85.443	MGP_PahariEiJ_G0025829	Polr3f	100	85.443	Mus_pahari
ENSCVAG00000007611	polr3f	100	85.443	MGP_SPRETEiJ_G0025304	Polr3f	100	85.443	Mus_spretus
ENSCVAG00000007611	polr3f	100	65.231	ENSMPUG00000001252	-	100	65.231	Mustela_putorius_furo
ENSCVAG00000007611	polr3f	100	85.443	ENSMLUG00000014844	POLR3F	100	85.443	Myotis_lucifugus
ENSCVAG00000007611	polr3f	100	85.127	ENSNGAG00000010898	Polr3f	100	85.127	Nannospalax_galili
ENSCVAG00000007611	polr3f	100	94.304	ENSNBRG00000020796	polr3f	100	94.304	Neolamprologus_brichardi
ENSCVAG00000007611	polr3f	100	85.759	ENSNLEG00000009778	POLR3F	100	85.759	Nomascus_leucogenys
ENSCVAG00000007611	polr3f	93	79.661	ENSMEUG00000010320	POLR3F	100	79.661	Notamacropus_eugenii
ENSCVAG00000007611	polr3f	100	84.810	ENSOPRG00000003385	POLR3F	100	84.810	Ochotona_princeps
ENSCVAG00000007611	polr3f	100	86.076	ENSODEG00000011521	POLR3F	100	86.076	Octodon_degus
ENSCVAG00000007611	polr3f	100	93.671	ENSONIG00000006858	polr3f	100	93.671	Oreochromis_niloticus
ENSCVAG00000007611	polr3f	100	84.810	ENSOANG00000001253	POLR3F	100	84.810	Ornithorhynchus_anatinus
ENSCVAG00000007611	polr3f	100	85.759	ENSOCUG00000015067	POLR3F	100	85.759	Oryctolagus_cuniculus
ENSCVAG00000007611	polr3f	100	93.354	ENSORLG00000022412	polr3f	100	93.354	Oryzias_latipes
ENSCVAG00000007611	polr3f	100	93.354	ENSORLG00020021944	polr3f	100	93.354	Oryzias_latipes_hni
ENSCVAG00000007611	polr3f	100	84.494	ENSOGAG00000002916	POLR3F	100	84.494	Otolemur_garnettii
ENSCVAG00000007611	polr3f	100	52.922	ENSOARG00000008647	-	100	52.922	Ovis_aries
ENSCVAG00000007611	polr3f	100	85.127	ENSOARG00000000315	-	100	85.127	Ovis_aries
ENSCVAG00000007611	polr3f	100	85.759	ENSPPAG00000036681	POLR3F	100	85.759	Pan_paniscus
ENSCVAG00000007611	polr3f	100	85.443	ENSPPRG00000024604	POLR3F	100	85.443	Panthera_pardus
ENSCVAG00000007611	polr3f	100	85.443	ENSPTIG00000020292	POLR3F	100	85.443	Panthera_tigris_altaica
ENSCVAG00000007611	polr3f	100	85.759	ENSPTRG00000013287	POLR3F	100	85.759	Pan_troglodytes
ENSCVAG00000007611	polr3f	100	85.443	ENSPANG00000025015	POLR3F	100	85.443	Papio_anubis
ENSCVAG00000007611	polr3f	100	88.608	ENSPKIG00000004427	polr3f	100	88.608	Paramormyrops_kingsleyae
ENSCVAG00000007611	polr3f	87	88.000	ENSPSIG00000016613	POLR3F	100	88.000	Pelodiscus_sinensis
ENSCVAG00000007611	polr3f	100	57.278	ENSPMGG00000018350	polr3f	100	62.025	Periophthalmus_magnuspinnatus
ENSCVAG00000007611	polr3f	100	86.076	ENSPEMG00000006966	Polr3f	100	86.076	Peromyscus_maniculatus_bairdii
ENSCVAG00000007611	polr3f	100	76.582	ENSPMAG00000005530	polr3f	100	76.582	Petromyzon_marinus
ENSCVAG00000007611	polr3f	100	84.494	ENSPCIG00000000908	POLR3F	85	84.494	Phascolarctos_cinereus
ENSCVAG00000007611	polr3f	100	96.835	ENSPFOG00000018334	polr3f	100	96.835	Poecilia_formosa
ENSCVAG00000007611	polr3f	100	96.835	ENSPLAG00000021803	polr3f	100	96.835	Poecilia_latipinna
ENSCVAG00000007611	polr3f	100	96.835	ENSPMEG00000013150	polr3f	100	96.835	Poecilia_mexicana
ENSCVAG00000007611	polr3f	100	96.835	ENSPREG00000005278	polr3f	100	96.835	Poecilia_reticulata
ENSCVAG00000007611	polr3f	100	85.759	ENSPPYG00000010737	POLR3F	100	85.759	Pongo_abelii
ENSCVAG00000007611	polr3f	68	87.838	ENSPCAG00000004893	POLR3F	71	87.838	Procavia_capensis
ENSCVAG00000007611	polr3f	100	85.443	ENSPCOG00000004543	POLR3F	100	85.443	Propithecus_coquereli
ENSCVAG00000007611	polr3f	100	85.127	ENSPVAG00000000403	POLR3F	100	85.127	Pteropus_vampyrus
ENSCVAG00000007611	polr3f	100	94.620	ENSPNYG00000016276	polr3f	100	94.620	Pundamilia_nyererei
ENSCVAG00000007611	polr3f	100	89.873	ENSPNAG00000005164	polr3f	100	89.873	Pygocentrus_nattereri
ENSCVAG00000007611	polr3f	100	85.443	ENSRNOG00000007548	Polr3f	85	85.443	Rattus_norvegicus
ENSCVAG00000007611	polr3f	100	85.443	ENSRBIG00000021268	POLR3F	100	85.443	Rhinopithecus_bieti
ENSCVAG00000007611	polr3f	100	85.443	ENSRROG00000039911	POLR3F	100	85.443	Rhinopithecus_roxellana
ENSCVAG00000007611	polr3f	62	30.244	YNR003C	RPC34	55	32.768	Saccharomyces_cerevisiae
ENSCVAG00000007611	polr3f	100	86.076	ENSSBOG00000018207	POLR3F	100	86.076	Saimiri_boliviensis_boliviensis
ENSCVAG00000007611	polr3f	100	67.823	ENSSHAG00000018160	POLR3F	100	68.139	Sarcophilus_harrisii
ENSCVAG00000007611	polr3f	100	89.241	ENSSFOG00015022433	polr3f	100	89.241	Scleropages_formosus
ENSCVAG00000007611	polr3f	100	90.506	ENSSMAG00000021029	polr3f	100	90.506	Scophthalmus_maximus
ENSCVAG00000007611	polr3f	100	83.544	ENSSDUG00000022435	polr3f	100	83.544	Seriola_dumerili
ENSCVAG00000007611	polr3f	100	93.987	ENSSLDG00000012761	polr3f	100	93.987	Seriola_lalandi_dorsalis
ENSCVAG00000007611	polr3f	100	76.899	ENSSARG00000006039	POLR3F	100	76.899	Sorex_araneus
ENSCVAG00000007611	polr3f	100	84.810	ENSSPUG00000001873	POLR3F	100	84.810	Sphenodon_punctatus
ENSCVAG00000007611	polr3f	100	86.392	ENSSPAG00000002092	polr3f	100	86.392	Stegastes_partitus
ENSCVAG00000007611	polr3f	100	84.810	ENSSSCG00000007095	POLR3F	100	89.224	Sus_scrofa
ENSCVAG00000007611	polr3f	100	86.076	ENSTGUG00000005839	POLR3F	100	86.076	Taeniopygia_guttata
ENSCVAG00000007611	polr3f	100	91.456	ENSTRUG00000012101	polr3f	100	91.456	Takifugu_rubripes
ENSCVAG00000007611	polr3f	100	90.823	ENSTNIG00000006456	polr3f	100	90.823	Tetraodon_nigroviridis
ENSCVAG00000007611	polr3f	100	69.304	ENSTBEG00000007921	POLR3F	100	69.304	Tupaia_belangeri
ENSCVAG00000007611	polr3f	100	85.127	ENSTTRG00000002580	POLR3F	100	85.127	Tursiops_truncatus
ENSCVAG00000007611	polr3f	54	86.145	ENSUAMG00000024166	POLR3F	100	86.145	Ursus_americanus
ENSCVAG00000007611	polr3f	100	85.127	ENSUMAG00000024944	POLR3F	100	85.127	Ursus_maritimus
ENSCVAG00000007611	polr3f	100	84.494	ENSVPAG00000009063	POLR3F	100	84.494	Vicugna_pacos
ENSCVAG00000007611	polr3f	100	85.127	ENSVVUG00000012925	POLR3F	100	85.127	Vulpes_vulpes
ENSCVAG00000007611	polr3f	100	84.810	ENSXETG00000024898	polr3f	100	84.810	Xenopus_tropicalis
ENSCVAG00000007611	polr3f	87	96.000	ENSXCOG00000010301	polr3f	100	96.000	Xiphophorus_couchianus
ENSCVAG00000007611	polr3f	100	96.519	ENSXMAG00000004604	polr3f	100	96.519	Xiphophorus_maculatus