EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000007679 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 18241 bases
Position: chrKL652509.1:2639767-2658007
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000006160	RRM_1	PF00076.22	6.4e-33	1	2
ENSCVAP00000006160	RRM_1	PF00076.22	6.4e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000005467	-	1530	-	ENSCVAP00000006160	509 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000007679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000007679	-	86	52.980	ENSCVAG00000019538	sfpq	54	60.947
ENSCVAG00000007679	-	54	68.478	ENSCVAG00000003978	nono	88	53.547

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007679	-	78	68.483	ENSG00000121390	PSPC1	81	78.616	Homo_sapiens
ENSCVAG00000007679	-	100	77.247	ENSAPOG00000015946	pspc1	100	77.247	Acanthochromis_polyacanthus
ENSCVAG00000007679	-	78	68.483	ENSAMEG00000017420	PSPC1	87	66.739	Ailuropoda_melanoleuca
ENSCVAG00000007679	-	100	75.146	ENSACIG00000018695	pspc1	100	73.981	Amphilophus_citrinellus
ENSCVAG00000007679	-	100	77.714	ENSAOCG00000005279	pspc1	100	77.714	Amphiprion_ocellaris
ENSCVAG00000007679	-	100	78.161	ENSAPEG00000015927	pspc1	100	78.161	Amphiprion_percula
ENSCVAG00000007679	-	100	68.762	ENSATEG00000004878	pspc1	100	67.048	Anabas_testudineus
ENSCVAG00000007679	-	76	63.107	ENSAPLG00000006246	PSPC1	100	64.373	Anas_platyrhynchos
ENSCVAG00000007679	-	61	71.975	ENSAPLG00000003643	SFPQ	83	55.507	Anas_platyrhynchos
ENSCVAG00000007679	-	89	61.602	ENSACAG00000002093	PSPC1	90	64.182	Anolis_carolinensis
ENSCVAG00000007679	-	87	51.542	ENSACAG00000013307	-	67	51.641	Anolis_carolinensis
ENSCVAG00000007679	-	92	62.173	ENSANAG00000000059	PSPC1	82	76.250	Aotus_nancymaae
ENSCVAG00000007679	-	100	73.099	ENSACLG00000027220	pspc1	100	72.287	Astatotilapia_calliptera
ENSCVAG00000007679	-	100	61.993	ENSAMXG00000036881	pspc1	100	62.362	Astyanax_mexicanus
ENSCVAG00000007679	-	86	65.227	ENSBTAG00000003934	PSPC1	88	66.091	Bos_taurus
ENSCVAG00000007679	-	92	62.173	ENSCJAG00000004554	PSPC1	87	66.307	Callithrix_jacchus
ENSCVAG00000007679	-	78	68.483	ENSCAFG00020002009	PSPC1	81	78.616	Canis_lupus_dingo
ENSCVAG00000007679	-	86	65.227	ENSCHIG00000016708	PSPC1	88	66.091	Capra_hircus
ENSCVAG00000007679	-	75	59.024	ENSTSYG00000032882	PSPC1	88	57.946	Carlito_syrichta
ENSCVAG00000007679	-	78	68.246	ENSCPOG00000000395	PSPC1	82	78.616	Cavia_porcellus
ENSCVAG00000007679	-	92	62.173	ENSCCAG00000033498	PSPC1	87	66.739	Cebus_capucinus
ENSCVAG00000007679	-	78	68.246	ENSCATG00000036434	PSPC1	88	78.616	Cercocebus_atys
ENSCVAG00000007679	-	69	66.931	ENSCLAG00000005241	PSPC1	97	61.778	Chinchilla_lanigera
ENSCVAG00000007679	-	83	65.695	ENSCHOG00000008913	PSPC1	87	65.727	Choloepus_hoffmanni
ENSCVAG00000007679	-	90	63.017	ENSCPBG00000020859	PSPC1	91	64.151	Chrysemys_picta_bellii
ENSCVAG00000007679	-	60	59.868	ENSCSAVG00000003533	-	53	62.590	Ciona_savignyi
ENSCVAG00000007679	-	52	80.303	ENSCANG00000018948	PSPC1	87	80.303	Colobus_angolensis_palliatus
ENSCVAG00000007679	-	92	63.804	ENSCGRG00001018368	Pspc1	87	66.307	Cricetulus_griseus_chok1gshd
ENSCVAG00000007679	-	92	63.804	ENSCGRG00000011724	Pspc1	87	66.307	Cricetulus_griseus_crigri
ENSCVAG00000007679	-	100	60.000	ENSDARG00000006621	pspc1	100	64.268	Danio_rerio
ENSCVAG00000007679	-	86	65.659	ENSDNOG00000011078	PSPC1	90	65.344	Dasypus_novemcinctus
ENSCVAG00000007679	-	91	61.044	ENSDORG00000016050	Pspc1	87	63.931	Dipodomys_ordii
ENSCVAG00000007679	-	64	42.330	ENSEBUG00000010133	pspc1	72	48.014	Eptatretus_burgeri
ENSCVAG00000007679	-	90	51.012	ENSEBUG00000003964	-	73	51.982	Eptatretus_burgeri
ENSCVAG00000007679	-	86	65.443	ENSEASG00005000119	PSPC1	82	78.616	Equus_asinus_asinus
ENSCVAG00000007679	-	86	65.443	ENSECAG00000017286	PSPC1	82	78.616	Equus_caballus
ENSCVAG00000007679	-	50	68.898	ENSEEUG00000011288	-	52	67.037	Erinaceus_europaeus
ENSCVAG00000007679	-	100	64.498	ENSELUG00000003746	pspc1	100	65.009	Esox_lucius
ENSCVAG00000007679	-	78	68.720	ENSFCAG00000027841	PSPC1	81	78.616	Felis_catus
ENSCVAG00000007679	-	86	64.440	ENSFALG00000008750	PSPC1	99	60.113	Ficedula_albicollis
ENSCVAG00000007679	-	91	63.320	ENSFDAG00000002617	PSPC1	89	66.307	Fukomys_damarensis
ENSCVAG00000007679	-	100	58.365	ENSGMOG00000015074	pspc1	100	58.175	Gadus_morhua
ENSCVAG00000007679	-	86	64.103	ENSGALG00000017142	PSPC1	99	59.150	Gallus_gallus
ENSCVAG00000007679	-	77	86.902	ENSGAFG00000006327	pspc1	82	86.902	Gambusia_affinis
ENSCVAG00000007679	-	100	70.385	ENSGACG00000014901	pspc1	94	77.679	Gasterosteus_aculeatus
ENSCVAG00000007679	-	89	56.710	ENSGAGG00000017325	-	69	54.604	Gopherus_agassizii
ENSCVAG00000007679	-	90	63.017	ENSGAGG00000019164	PSPC1	91	64.151	Gopherus_agassizii
ENSCVAG00000007679	-	78	68.483	ENSGGOG00000003414	PSPC1	81	78.616	Gorilla_gorilla
ENSCVAG00000007679	-	100	78.530	ENSHBUG00000001139	pspc1	100	78.530	Haplochromis_burtoni
ENSCVAG00000007679	-	91	63.340	ENSHGLG00000018811	PSPC1	88	66.307	Heterocephalus_glaber_female
ENSCVAG00000007679	-	55	79.433	ENSHGLG00100007962	PSPC1	86	80.000	Heterocephalus_glaber_male
ENSCVAG00000007679	-	80	72.249	ENSHCOG00000013251	pspc1	99	67.261	Hippocampus_comes
ENSCVAG00000007679	-	100	63.277	ENSIPUG00000013192	pspc1	100	63.977	Ictalurus_punctatus
ENSCVAG00000007679	-	91	63.544	ENSSTOG00000026833	PSPC1	81	78.616	Ictidomys_tridecemlineatus
ENSCVAG00000007679	-	86	65.152	ENSJJAG00000018334	Pspc1	87	66.234	Jaculus_jaculus
ENSCVAG00000007679	-	100	64.272	ENSKMAG00000013525	-	98	70.986	Kryptolebias_marmoratus
ENSCVAG00000007679	-	99	68.539	ENSLBEG00000004474	pspc1	100	68.539	Labrus_bergylta
ENSCVAG00000007679	-	78	66.667	ENSLACG00000010762	PSPC1	87	64.655	Latimeria_chalumnae
ENSCVAG00000007679	-	100	63.296	ENSLOCG00000010832	pspc1	99	63.516	Lepisosteus_oculatus
ENSCVAG00000007679	-	86	65.443	ENSLAFG00000010968	PSPC1	92	64.476	Loxodonta_africana
ENSCVAG00000007679	-	78	68.246	ENSMFAG00000032728	PSPC1	89	78.616	Macaca_fascicularis
ENSCVAG00000007679	-	78	68.246	ENSMMUG00000020262	PSPC1	86	78.438	Macaca_mulatta
ENSCVAG00000007679	-	78	68.246	ENSMNEG00000027401	PSPC1	84	70.127	Macaca_nemestrina
ENSCVAG00000007679	-	67	67.760	ENSMLEG00000039043	PSPC1	94	65.602	Mandrillus_leucophaeus
ENSCVAG00000007679	-	100	72.744	ENSMAMG00000004333	pspc1	100	72.368	Mastacembelus_armatus
ENSCVAG00000007679	-	100	73.099	ENSMZEG00005005726	pspc1	100	72.287	Maylandia_zebra
ENSCVAG00000007679	-	77	62.679	ENSMGAG00000015134	PSPC1	100	64.303	Meleagris_gallopavo
ENSCVAG00000007679	-	79	62.233	ENSMAUG00000021067	Pspc1	84	61.809	Mesocricetus_auratus
ENSCVAG00000007679	-	86	67.026	ENSMICG00000013970	PSPC1	81	78.616	Microcebus_murinus
ENSCVAG00000007679	-	83	66.071	ENSMOCG00000006060	Pspc1	87	65.875	Microtus_ochrogaster
ENSCVAG00000007679	-	82	78.571	ENSMMOG00000004352	pspc1	72	78.571	Mola_mola
ENSCVAG00000007679	-	81	68.065	ENSMODG00000008029	PSPC1	65	70.471	Monodelphis_domestica
ENSCVAG00000007679	-	100	76.015	ENSMALG00000008914	pspc1	100	75.629	Monopterus_albus
ENSCVAG00000007679	-	81	67.442	MGP_CAROLIEiJ_G0019341	Pspc1	85	69.697	Mus_caroli
ENSCVAG00000007679	-	83	66.147	ENSMUSG00000021938	Pspc1	85	69.697	Mus_musculus
ENSCVAG00000007679	-	92	63.265	MGP_PahariEiJ_G0030359	Pspc1	85	69.697	Mus_pahari
ENSCVAG00000007679	-	83	66.147	MGP_SPRETEiJ_G0020232	Pspc1	85	69.697	Mus_spretus
ENSCVAG00000007679	-	78	68.483	ENSMPUG00000013347	PSPC1	87	66.739	Mustela_putorius_furo
ENSCVAG00000007679	-	86	64.530	ENSMLUG00000017663	PSPC1	90	64.669	Myotis_lucifugus
ENSCVAG00000007679	-	92	63.804	ENSNGAG00000011271	Pspc1	87	65.875	Nannospalax_galili
ENSCVAG00000007679	-	77	75.126	ENSNBRG00000014059	pspc1	93	71.891	Neolamprologus_brichardi
ENSCVAG00000007679	-	78	68.483	ENSNLEG00000001294	PSPC1	87	66.523	Nomascus_leucogenys
ENSCVAG00000007679	-	86	58.747	ENSODEG00000019012	-	87	60.907	Octodon_degus
ENSCVAG00000007679	-	86	56.803	ENSODEG00000007817	-	87	55.011	Octodon_degus
ENSCVAG00000007679	-	100	78.185	ENSONIG00000012010	pspc1	99	78.571	Oreochromis_niloticus
ENSCVAG00000007679	-	67	68.306	ENSOANG00000009017	-	100	65.111	Ornithorhynchus_anatinus
ENSCVAG00000007679	-	83	53.075	ENSOANG00000011381	-	98	49.899	Ornithorhynchus_anatinus
ENSCVAG00000007679	-	78	68.884	ENSOCUG00000006153	PSPC1	87	66.667	Oryctolagus_cuniculus
ENSCVAG00000007679	-	100	73.166	ENSORLG00000004232	-	100	69.808	Oryzias_latipes
ENSCVAG00000007679	-	100	73.745	ENSORLG00020000578	PSPC1	100	71.098	Oryzias_latipes_hni
ENSCVAG00000007679	-	100	73.938	ENSORLG00015017480	pspc1	100	70.577	Oryzias_latipes_hsok
ENSCVAG00000007679	-	83	66.518	ENSOGAG00000012643	PSPC1	87	66.523	Otolemur_garnettii
ENSCVAG00000007679	-	86	64.946	ENSOARG00000014163	PSPC1	94	65.591	Ovis_aries
ENSCVAG00000007679	-	64	77.108	ENSPPAG00000009836	PSPC1	94	77.108	Pan_paniscus
ENSCVAG00000007679	-	78	68.720	ENSPPRG00000008833	PSPC1	87	66.523	Panthera_pardus
ENSCVAG00000007679	-	67	67.486	ENSPTIG00000016917	PSPC1	84	65.602	Panthera_tigris_altaica
ENSCVAG00000007679	-	76	69.975	ENSPTRG00000005677	PSPC1	81	78.616	Pan_troglodytes
ENSCVAG00000007679	-	78	68.246	ENSPANG00000001992	PSPC1	87	78.616	Papio_anubis
ENSCVAG00000007679	-	100	61.624	ENSPKIG00000003578	pspc1	100	63.585	Paramormyrops_kingsleyae
ENSCVAG00000007679	-	89	62.786	ENSPSIG00000005168	PSPC1	90	64.033	Pelodiscus_sinensis
ENSCVAG00000007679	-	69	69.359	ENSPMGG00000015135	pspc1	98	68.539	Periophthalmus_magnuspinnatus
ENSCVAG00000007679	-	83	66.295	ENSPEMG00000015214	Pspc1	87	66.091	Peromyscus_maniculatus_bairdii
ENSCVAG00000007679	-	56	42.568	ENSPMAG00000004618	pspc1	80	45.038	Petromyzon_marinus
ENSCVAG00000007679	-	83	66.741	ENSPCIG00000017680	PSPC1	87	66.307	Phascolarctos_cinereus
ENSCVAG00000007679	-	99	83.752	ENSPFOG00000003362	pspc1	100	84.200	Poecilia_formosa
ENSCVAG00000007679	-	100	83.716	ENSPLAG00000011540	pspc1	100	84.160	Poecilia_latipinna
ENSCVAG00000007679	-	100	83.525	ENSPMEG00000008322	pspc1	100	83.969	Poecilia_mexicana
ENSCVAG00000007679	-	100	82.634	ENSPREG00000007786	pspc1	100	83.397	Poecilia_reticulata
ENSCVAG00000007679	-	78	68.009	ENSPPYG00000005186	PSPC1	83	70.380	Pongo_abelii
ENSCVAG00000007679	-	92	64.682	ENSPCOG00000014364	PSPC1	86	66.377	Propithecus_coquereli
ENSCVAG00000007679	-	86	64.579	ENSPVAG00000005036	PSPC1	91	64.375	Pteropus_vampyrus
ENSCVAG00000007679	-	100	73.489	ENSPNYG00000008893	pspc1	100	72.674	Pundamilia_nyererei
ENSCVAG00000007679	-	100	64.595	ENSPNAG00000016511	pspc1	100	64.925	Pygocentrus_nattereri
ENSCVAG00000007679	-	92	62.986	ENSRNOG00000020782	Pspc1	85	69.873	Rattus_norvegicus
ENSCVAG00000007679	-	78	68.483	ENSRBIG00000036057	PSPC1	89	78.616	Rhinopithecus_bieti
ENSCVAG00000007679	-	78	68.009	ENSRROG00000036334	PSPC1	81	78.616	Rhinopithecus_roxellana
ENSCVAG00000007679	-	77	56.174	ENSSBOG00000028172	PSPC1	89	78.889	Saimiri_boliviensis_boliviensis
ENSCVAG00000007679	-	83	61.556	ENSSHAG00000004696	PSPC1	87	61.290	Sarcophilus_harrisii
ENSCVAG00000007679	-	86	65.605	ENSSFOG00015001395	pspc1	99	67.804	Scleropages_formosus
ENSCVAG00000007679	-	100	74.102	ENSSMAG00000001761	pspc1	100	73.913	Scophthalmus_maximus
ENSCVAG00000007679	-	100	74.122	ENSSDUG00000010651	pspc1	100	75.601	Seriola_dumerili
ENSCVAG00000007679	-	100	71.930	ENSSLDG00000004284	pspc1	100	70.849	Seriola_lalandi_dorsalis
ENSCVAG00000007679	-	78	62.559	ENSSARG00000000888	PSPC1	88	60.475	Sorex_araneus
ENSCVAG00000007679	-	90	55.000	ENSSPUG00000008550	PSPC1	99	53.084	Sphenodon_punctatus
ENSCVAG00000007679	-	100	76.460	ENSSPAG00000001921	pspc1	100	76.460	Stegastes_partitus
ENSCVAG00000007679	-	78	68.483	ENSSSCG00000009569	PSPC1	83	77.570	Sus_scrofa
ENSCVAG00000007679	-	86	64.440	ENSTGUG00000011295	PSPC1	98	65.577	Taeniopygia_guttata
ENSCVAG00000007679	-	100	69.112	ENSTRUG00000011335	pspc1	100	68.533	Takifugu_rubripes
ENSCVAG00000007679	-	100	69.439	ENSTNIG00000010358	pspc1	100	69.439	Tetraodon_nigroviridis
ENSCVAG00000007679	-	86	56.893	ENSTBEG00000002361	PSPC1	87	56.455	Tupaia_belangeri
ENSCVAG00000007679	-	92	62.118	ENSTTRG00000003343	PSPC1	88	66.307	Tursiops_truncatus
ENSCVAG00000007679	-	69	68.362	ENSUAMG00000012309	PSPC1	80	80.000	Ursus_americanus
ENSCVAG00000007679	-	78	68.246	ENSUMAG00000013993	PSPC1	89	78.302	Ursus_maritimus
ENSCVAG00000007679	-	75	64.373	ENSVPAG00000010029	PSPC1	100	65.602	Vicugna_pacos
ENSCVAG00000007679	-	78	68.483	ENSVVUG00000006414	PSPC1	83	78.616	Vulpes_vulpes
ENSCVAG00000007679	-	77	87.154	ENSXCOG00000017438	pspc1	94	87.154	Xiphophorus_couchianus
ENSCVAG00000007679	-	77	87.657	ENSXMAG00000007929	pspc1	94	87.657	Xiphophorus_maculatus