EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000007707 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 11829 bases
Position: chrKL652599.1:1094359-1106187
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000006229	RVT_1	PF00078.27	8.8e-42	1	1
ENSCVAP00000006229	RVT_2	PF07727.14	4.3e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000005388	-	2022	-	ENSCVAP00000006229	673 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000007707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007707's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000007707	-	52	34.734	ENSCVAG00000018360	-	85	34.734
ENSCVAG00000007707	-	50	33.333	ENSCVAG00000009961	-	67	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007707	-	51	33.056	ENSACIG00000020849	-	86	33.056	Amphilophus_citrinellus
ENSCVAG00000007707	-	53	31.579	ENSAOCG00000019069	-	98	31.579	Amphiprion_ocellaris
ENSCVAG00000007707	-	53	31.844	ENSAOCG00000012592	-	76	31.844	Amphiprion_ocellaris
ENSCVAG00000007707	-	64	31.544	ENSAOCG00000014605	-	89	31.544	Amphiprion_ocellaris
ENSCVAG00000007707	-	63	30.184	ENSAPEG00000002696	-	50	30.184	Amphiprion_percula
ENSCVAG00000007707	-	63	30.184	ENSAPEG00000003065	-	50	30.184	Amphiprion_percula
ENSCVAG00000007707	-	50	33.994	ENSACAG00000010816	-	97	33.994	Anolis_carolinensis
ENSCVAG00000007707	-	54	33.424	ENSACLG00000011319	-	96	33.424	Astatotilapia_calliptera
ENSCVAG00000007707	-	53	38.655	ENSACLG00000011312	-	52	38.655	Astatotilapia_calliptera
ENSCVAG00000007707	-	53	34.711	ENSACLG00000013571	-	89	34.711	Astatotilapia_calliptera
ENSCVAG00000007707	-	64	35.294	ENSACLG00000015899	-	58	35.294	Astatotilapia_calliptera
ENSCVAG00000007707	-	72	30.060	ENSACLG00000014178	-	53	30.060	Astatotilapia_calliptera
ENSCVAG00000007707	-	50	31.322	ENSAMXG00000040763	-	86	31.322	Astyanax_mexicanus
ENSCVAG00000007707	-	64	32.819	ENSAMXG00000040121	-	53	32.819	Astyanax_mexicanus
ENSCVAG00000007707	-	55	32.976	ENSAMXG00000038901	-	77	32.976	Astyanax_mexicanus
ENSCVAG00000007707	-	59	34.010	ENSAMXG00000032036	-	52	34.010	Astyanax_mexicanus
ENSCVAG00000007707	-	53	33.426	ENSGAGG00000013921	-	96	33.426	Gopherus_agassizii
ENSCVAG00000007707	-	53	32.597	ENSHBUG00000007736	-	87	33.058	Haplochromis_burtoni
ENSCVAG00000007707	-	61	36.842	ENSHBUG00000020853	-	54	36.842	Haplochromis_burtoni
ENSCVAG00000007707	-	53	35.000	ENSKMAG00000014393	-	84	35.000	Kryptolebias_marmoratus
ENSCVAG00000007707	-	63	33.796	ENSKMAG00000014872	-	51	33.796	Kryptolebias_marmoratus
ENSCVAG00000007707	-	53	33.609	ENSLBEG00000015758	-	53	33.609	Labrus_bergylta
ENSCVAG00000007707	-	59	31.017	ENSLACG00000022265	-	52	31.017	Latimeria_chalumnae
ENSCVAG00000007707	-	64	30.290	ENSLOCG00000000437	-	50	30.290	Lepisosteus_oculatus
ENSCVAG00000007707	-	59	33.090	ENSMZEG00005011529	-	76	33.090	Maylandia_zebra
ENSCVAG00000007707	-	57	33.247	ENSMZEG00005025877	-	91	33.247	Maylandia_zebra
ENSCVAG00000007707	-	59	33.090	ENSMZEG00005017030	-	77	33.090	Maylandia_zebra
ENSCVAG00000007707	-	57	33.247	ENSMZEG00005008304	-	91	33.247	Maylandia_zebra
ENSCVAG00000007707	-	53	33.609	ENSNBRG00000012595	-	82	33.609	Neolamprologus_brichardi
ENSCVAG00000007707	-	58	30.380	ENSNBRG00000001934	-	83	30.380	Neolamprologus_brichardi
ENSCVAG00000007707	-	55	35.185	ENSNBRG00000000972	-	98	33.831	Neolamprologus_brichardi
ENSCVAG00000007707	-	64	36.036	ENSONIG00000021275	-	58	36.036	Oreochromis_niloticus
ENSCVAG00000007707	-	51	31.503	ENSORLG00000024236	-	91	31.503	Oryzias_latipes
ENSCVAG00000007707	-	59	30.097	ENSORLG00000024464	-	69	30.097	Oryzias_latipes
ENSCVAG00000007707	-	63	31.713	ENSORLG00000023604	-	53	31.713	Oryzias_latipes
ENSCVAG00000007707	-	60	30.657	ENSORLG00000025901	-	50	30.657	Oryzias_latipes
ENSCVAG00000007707	-	63	30.913	ENSORLG00000028313	-	50	30.913	Oryzias_latipes
ENSCVAG00000007707	-	63	30.115	ENSORLG00000030415	-	53	30.115	Oryzias_latipes
ENSCVAG00000007707	-	55	34.715	ENSORLG00000023713	-	96	34.715	Oryzias_latipes
ENSCVAG00000007707	-	50	33.235	ENSORLG00000028706	-	68	33.235	Oryzias_latipes
ENSCVAG00000007707	-	63	31.075	ENSORLG00020003980	-	51	31.075	Oryzias_latipes_hni
ENSCVAG00000007707	-	63	31.090	ENSORLG00020001651	-	50	31.090	Oryzias_latipes_hni
ENSCVAG00000007707	-	63	31.724	ENSORLG00020014626	-	80	31.724	Oryzias_latipes_hni
ENSCVAG00000007707	-	50	31.858	ENSORLG00020010425	-	59	31.858	Oryzias_latipes_hni
ENSCVAG00000007707	-	50	31.268	ENSORLG00020007779	-	90	31.268	Oryzias_latipes_hni
ENSCVAG00000007707	-	50	31.858	ENSORLG00020018629	-	89	31.858	Oryzias_latipes_hni
ENSCVAG00000007707	-	51	32.584	ENSORLG00015020895	-	91	32.584	Oryzias_latipes_hsok
ENSCVAG00000007707	-	50	31.563	ENSORLG00015007703	-	86	31.563	Oryzias_latipes_hsok
ENSCVAG00000007707	-	62	32.629	ENSORLG00015021206	-	81	32.629	Oryzias_latipes_hsok
ENSCVAG00000007707	-	63	31.279	ENSPFOG00000024463	-	55	31.279	Poecilia_formosa
ENSCVAG00000007707	-	52	35.775	ENSPLAG00000015080	-	85	35.775	Poecilia_latipinna
ENSCVAG00000007707	-	60	32.048	ENSPMEG00000010792	-	52	32.048	Poecilia_mexicana
ENSCVAG00000007707	-	62	30.374	ENSPREG00000006501	-	75	30.374	Poecilia_reticulata
ENSCVAG00000007707	-	51	35.057	ENSPREG00000004933	-	87	35.057	Poecilia_reticulata
ENSCVAG00000007707	-	56	36.294	ENSPREG00000010319	-	90	36.294	Poecilia_reticulata
ENSCVAG00000007707	-	57	33.333	ENSPNAG00000024749	-	92	33.333	Pygocentrus_nattereri
ENSCVAG00000007707	-	57	35.969	ENSPNAG00000002786	-	95	35.969	Pygocentrus_nattereri
ENSCVAG00000007707	-	50	36.232	ENSPNAG00000014375	-	83	36.232	Pygocentrus_nattereri
ENSCVAG00000007707	-	52	33.148	ENSSMAG00000014015	-	78	33.148	Scophthalmus_maximus
ENSCVAG00000007707	-	54	30.928	ENSSPUG00000015446	-	87	30.928	Sphenodon_punctatus
ENSCVAG00000007707	-	53	35.440	ENSSPAG00000000151	-	77	35.440	Stegastes_partitus
ENSCVAG00000007707	-	61	33.133	ENSXETG00000034134	-	55	33.133	Xenopus_tropicalis
ENSCVAG00000007707	-	63	35.465	ENSXETG00000030860	-	54	35.465	Xenopus_tropicalis
ENSCVAG00000007707	-	52	33.711	ENSXMAG00000023211	-	79	33.711	Xiphophorus_maculatus