EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000007789 (Gene tree)
Gene ID: 107085474
Gene Symbol: -
Alias: -
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4161 bases
Position: chrKL652626.1:454369-458529
Accession: 107085474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000006281	RRM_1	PF00076.22	6.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000005262	-	1585	XM_015375797	ENSCVAP00000006281	242 (aa)	XP_015231283	UPI000742ADCA

Gene Model

Click here to download ENSCVAG00000007789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007789's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000007789	-	100	45.255	ENSCVAG00000014869	alyref	100	50.554

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007789	-	100	66.667	ENSAPOG00000000183	-	100	64.683	Acanthochromis_polyacanthus
ENSCVAG00000007789	-	100	56.410	ENSACIG00000020351	-	100	57.509	Amphilophus_citrinellus
ENSCVAG00000007789	-	97	45.421	ENSACIG00000006351	alyref	97	46.863	Amphilophus_citrinellus
ENSCVAG00000007789	-	100	46.043	ENSAOCG00000014012	alyref	100	48.540	Amphiprion_ocellaris
ENSCVAG00000007789	-	100	67.729	ENSAOCG00000019305	-	100	66.534	Amphiprion_ocellaris
ENSCVAG00000007789	-	100	46.043	ENSAPEG00000014603	alyref	100	48.540	Amphiprion_percula
ENSCVAG00000007789	-	100	68.127	ENSAPEG00000013527	-	100	66.534	Amphiprion_percula
ENSCVAG00000007789	-	75	49.510	ENSATEG00000004307	alyref	100	46.786	Anabas_testudineus
ENSCVAG00000007789	-	100	67.969	ENSATEG00000000382	-	100	65.217	Anabas_testudineus
ENSCVAG00000007789	-	50	51.111	ENSAPLG00000014745	-	98	52.593	Anas_platyrhynchos
ENSCVAG00000007789	-	100	62.500	ENSACLG00000010184	-	100	62.121	Astatotilapia_calliptera
ENSCVAG00000007789	-	100	46.237	ENSACLG00000008432	alyref	100	49.091	Astatotilapia_calliptera
ENSCVAG00000007789	-	100	45.965	ENSAMXG00000007359	alyref	100	47.872	Astyanax_mexicanus
ENSCVAG00000007789	-	98	40.075	ENSCING00000013568	-	99	42.085	Ciona_intestinalis
ENSCVAG00000007789	-	98	38.976	ENSCSAVG00000003324	-	99	42.000	Ciona_savignyi
ENSCVAG00000007789	-	100	45.421	ENSCSEG00000017800	alyref	100	50.000	Cynoglossus_semilaevis
ENSCVAG00000007789	-	100	46.154	ENSDARG00000077732	alyref	100	47.163	Danio_rerio
ENSCVAG00000007789	-	99	40.511	FBgn0010774	Ref1	100	37.184	Drosophila_melanogaster
ENSCVAG00000007789	-	100	41.833	ENSEBUG00000006305	alyref	100	40.927	Eptatretus_burgeri
ENSCVAG00000007789	-	98	44.231	ENSEBUG00000008253	alyref	95	43.182	Eptatretus_burgeri
ENSCVAG00000007789	-	100	45.652	ENSELUG00000017178	alyref	100	49.819	Esox_lucius
ENSCVAG00000007789	-	100	51.311	ENSELUG00000008849	-	100	52.809	Esox_lucius
ENSCVAG00000007789	-	59	55.128	ENSFALG00000011923	-	97	55.128	Ficedula_albicollis
ENSCVAG00000007789	-	100	47.955	ENSFHEG00000019426	alyref	100	48.014	Fundulus_heteroclitus
ENSCVAG00000007789	-	100	89.712	ENSFHEG00000004698	-	100	89.712	Fundulus_heteroclitus
ENSCVAG00000007789	-	100	47.778	ENSGMOG00000009882	alyref	100	46.909	Gadus_morhua
ENSCVAG00000007789	-	70	58.511	ENSGMOG00000013122	-	100	58.511	Gadus_morhua
ENSCVAG00000007789	-	100	83.471	ENSGAFG00000007573	-	100	81.818	Gambusia_affinis
ENSCVAG00000007789	-	100	46.545	ENSGAFG00000006014	alyref	100	49.446	Gambusia_affinis
ENSCVAG00000007789	-	100	46.237	ENSHBUG00000020196	alyref	100	49.091	Haplochromis_burtoni
ENSCVAG00000007789	-	100	62.921	ENSHBUG00000001454	-	100	62.547	Haplochromis_burtoni
ENSCVAG00000007789	-	97	61.660	ENSHCOG00000012825	-	94	57.540	Hippocampus_comes
ENSCVAG00000007789	-	100	46.263	ENSIPUG00000009469	alyref	100	48.014	Ictalurus_punctatus
ENSCVAG00000007789	-	76	53.191	ENSSTOG00000016570	-	99	54.255	Ictidomys_tridecemlineatus
ENSCVAG00000007789	-	100	65.844	ENSKMAG00000006462	-	100	68.313	Kryptolebias_marmoratus
ENSCVAG00000007789	-	100	46.739	ENSKMAG00000008912	alyref	100	47.653	Kryptolebias_marmoratus
ENSCVAG00000007789	-	97	51.004	ENSLBEG00000023118	alyref	88	51.004	Labrus_bergylta
ENSCVAG00000007789	-	100	62.409	ENSLBEG00000005387	-	100	59.854	Labrus_bergylta
ENSCVAG00000007789	-	98	64.427	ENSLBEG00000012930	-	99	59.289	Labrus_bergylta
ENSCVAG00000007789	-	76	49.756	ENSLOCG00000013879	alyref	89	48.246	Lepisosteus_oculatus
ENSCVAG00000007789	-	100	45.324	ENSMAMG00000003034	alyref	100	46.975	Mastacembelus_armatus
ENSCVAG00000007789	-	100	66.798	ENSMAMG00000005464	-	100	64.822	Mastacembelus_armatus
ENSCVAG00000007789	-	100	46.237	ENSMZEG00005008639	alyref	100	49.091	Maylandia_zebra
ENSCVAG00000007789	-	100	62.121	ENSMZEG00005012096	-	100	61.742	Maylandia_zebra
ENSCVAG00000007789	-	99	59.363	ENSMMOG00000007032	-	98	57.317	Mola_mola
ENSCVAG00000007789	-	98	47.388	ENSMMOG00000012458	alyref	96	48.881	Mola_mola
ENSCVAG00000007789	-	100	65.399	ENSMALG00000006054	-	100	65.779	Monopterus_albus
ENSCVAG00000007789	-	100	44.444	ENSMLUG00000014372	-	100	46.667	Myotis_lucifugus
ENSCVAG00000007789	-	73	47.895	ENSMLUG00000028605	-	98	41.971	Myotis_lucifugus
ENSCVAG00000007789	-	97	42.697	ENSMLUG00000009247	-	98	42.803	Myotis_lucifugus
ENSCVAG00000007789	-	100	45.588	ENSMLUG00000006521	-	100	45.353	Myotis_lucifugus
ENSCVAG00000007789	-	100	44.286	ENSMLUG00000004098	-	100	46.241	Myotis_lucifugus
ENSCVAG00000007789	-	73	48.148	ENSMLUG00000022178	-	98	43.446	Myotis_lucifugus
ENSCVAG00000007789	-	97	43.321	ENSMLUG00000022467	-	98	43.636	Myotis_lucifugus
ENSCVAG00000007789	-	73	52.941	ENSMLUG00000030671	-	98	44.403	Myotis_lucifugus
ENSCVAG00000007789	-	100	50.980	ENSNGAG00000022014	-	100	52.778	Nannospalax_galili
ENSCVAG00000007789	-	100	45.907	ENSNBRG00000001747	alyref	100	49.097	Neolamprologus_brichardi
ENSCVAG00000007789	-	100	62.500	ENSNBRG00000017460	-	100	61.742	Neolamprologus_brichardi
ENSCVAG00000007789	-	100	44.718	ENSONIG00000019434	alyref	100	48.929	Oreochromis_niloticus
ENSCVAG00000007789	-	100	62.692	ENSONIG00000003296	-	100	63.077	Oreochromis_niloticus
ENSCVAG00000007789	-	98	56.954	ENSORLG00000001620	-	88	53.642	Oryzias_latipes
ENSCVAG00000007789	-	100	46.209	ENSORLG00020011942	alyref	100	49.265	Oryzias_latipes_hni
ENSCVAG00000007789	-	100	68.110	ENSORLG00020015673	-	100	66.929	Oryzias_latipes_hni
ENSCVAG00000007789	-	100	70.703	ENSORLG00015015143	-	100	66.797	Oryzias_latipes_hsok
ENSCVAG00000007789	-	100	47.636	ENSORLG00015022664	alyref	100	49.630	Oryzias_latipes_hsok
ENSCVAG00000007789	-	100	44.863	ENSOMEG00000019176	alyref	100	49.815	Oryzias_melastigma
ENSCVAG00000007789	-	100	71.713	ENSOMEG00000007158	-	99	68.127	Oryzias_melastigma
ENSCVAG00000007789	-	69	53.933	ENSPPAG00000036403	-	67	57.303	Pan_paniscus
ENSCVAG00000007789	-	100	48.561	ENSPKIG00000007070	alyref	100	52.290	Paramormyrops_kingsleyae
ENSCVAG00000007789	-	98	48.496	ENSPKIG00000006233	-	80	51.181	Paramormyrops_kingsleyae
ENSCVAG00000007789	-	69	58.721	ENSPMGG00000012994	-	93	59.302	Periophthalmus_magnuspinnatus
ENSCVAG00000007789	-	97	45.693	ENSPMGG00000016600	alyref	89	48.669	Periophthalmus_magnuspinnatus
ENSCVAG00000007789	-	100	51.004	ENSPEMG00000016628	-	100	52.191	Peromyscus_maniculatus_bairdii
ENSCVAG00000007789	-	100	88.066	ENSPFOG00000017094	-	100	88.066	Poecilia_formosa
ENSCVAG00000007789	-	100	45.126	ENSPFOG00000022825	alyref	99	49.270	Poecilia_formosa
ENSCVAG00000007789	-	100	88.066	ENSPLAG00000014380	-	100	88.066	Poecilia_latipinna
ENSCVAG00000007789	-	100	45.652	ENSPLAG00000006948	alyref	100	50.183	Poecilia_latipinna
ENSCVAG00000007789	-	100	45.126	ENSPMEG00000003547	alyref	100	49.270	Poecilia_mexicana
ENSCVAG00000007789	-	100	88.066	ENSPMEG00000023039	-	100	88.066	Poecilia_mexicana
ENSCVAG00000007789	-	100	45.652	ENSPREG00000015795	alyref	100	50.183	Poecilia_reticulata
ENSCVAG00000007789	-	100	84.337	ENSPREG00000003649	-	100	84.337	Poecilia_reticulata
ENSCVAG00000007789	-	98	60.465	ENSPNYG00000002879	-	98	59.690	Pundamilia_nyererei
ENSCVAG00000007789	-	100	46.237	ENSPNYG00000017498	alyref	100	49.091	Pundamilia_nyererei
ENSCVAG00000007789	-	100	46.043	ENSPNAG00000002531	alyref	100	46.350	Pygocentrus_nattereri
ENSCVAG00000007789	-	72	55.135	ENSSBOG00000030924	-	84	57.297	Saimiri_boliviensis_boliviensis
ENSCVAG00000007789	-	99	43.015	ENSSHAG00000012866	-	100	41.985	Sarcophilus_harrisii
ENSCVAG00000007789	-	97	46.058	ENSSHAG00000000609	-	98	43.775	Sarcophilus_harrisii
ENSCVAG00000007789	-	76	57.292	ENSSFOG00015003923	alyref	71	55.135	Scleropages_formosus
ENSCVAG00000007789	-	70	53.552	ENSSFOG00015003678	alyref	83	53.333	Scleropages_formosus
ENSCVAG00000007789	-	100	45.878	ENSSMAG00000009283	alyref	100	47.273	Scophthalmus_maximus
ENSCVAG00000007789	-	100	66.920	ENSSMAG00000011169	-	100	65.399	Scophthalmus_maximus
ENSCVAG00000007789	-	100	46.403	ENSSDUG00000016158	alyref	100	49.270	Seriola_dumerili
ENSCVAG00000007789	-	100	45.161	ENSSLDG00000017803	alyref	100	48.727	Seriola_lalandi_dorsalis
ENSCVAG00000007789	-	98	66.135	ENSSPAG00000017028	-	96	64.542	Stegastes_partitus
ENSCVAG00000007789	-	100	59.316	ENSTRUG00000003051	-	100	56.489	Takifugu_rubripes
ENSCVAG00000007789	-	100	62.000	ENSTNIG00000014136	-	100	57.143	Tetraodon_nigroviridis
ENSCVAG00000007789	-	100	47.212	ENSTNIG00000011595	alyref	100	48.106	Tetraodon_nigroviridis
ENSCVAG00000007789	-	73	54.301	ENSVVUG00000000272	-	90	55.446	Vulpes_vulpes
ENSCVAG00000007789	-	98	45.756	ENSXCOG00000018047	alyref	98	47.940	Xiphophorus_couchianus
ENSCVAG00000007789	-	98	45.756	ENSXMAG00000012218	alyref	98	48.689	Xiphophorus_maculatus
ENSCVAG00000007789	-	100	88.430	ENSXMAG00000018086	-	100	88.430	Xiphophorus_maculatus