EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000007828 (Gene tree)
Gene ID: 107085475
Gene Symbol: cwc25
Alias: ccdc49|fc11a02|flj20291l|im:7140273|pate|pte|wu:fc11a02|zgc:55552
Full Name: CWC25 spliceosome associated protein homolog
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5703 bases
Position: chrKL652626.1:394544-400246
Accession: 107085475
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000006306	CWC25	PF12542.8	3.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000005213	-	2864	XM_015375798	ENSCVAP00000006306	398 (aa)	XP_015231284	UPI000742BAA8

Gene Model

Click here to download ENSCVAG00000007828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007828	cwc25	100	52.511	ENSAMEG00000004292	CWC25	100	49.336	Ailuropoda_melanoleuca
ENSCVAG00000007828	cwc25	100	83.831	ENSAPEG00000013237	cwc25	100	85.075	Amphiprion_percula
ENSCVAG00000007828	cwc25	100	80.100	ENSATEG00000000799	cwc25	100	80.100	Anabas_testudineus
ENSCVAG00000007828	cwc25	98	46.032	ENSAPLG00000003710	CWC25	99	45.080	Anas_platyrhynchos
ENSCVAG00000007828	cwc25	100	53.682	ENSACAG00000013140	CWC25	100	47.717	Anolis_carolinensis
ENSCVAG00000007828	cwc25	100	47.146	ENSANAG00000033550	CWC25	65	74.648	Aotus_nancymaae
ENSCVAG00000007828	cwc25	100	81.390	ENSACLG00000009352	cwc25	100	78.412	Astatotilapia_calliptera
ENSCVAG00000007828	cwc25	100	64.925	ENSAMXG00000035125	cwc25	99	62.720	Astyanax_mexicanus
ENSCVAG00000007828	cwc25	100	51.598	ENSBTAG00000030591	CWC25	86	74.648	Bos_taurus
ENSCVAG00000007828	cwc25	100	52.036	ENSCAFG00000016561	CWC25	100	52.546	Canis_familiaris
ENSCVAG00000007828	cwc25	100	52.036	ENSCAFG00020023017	CWC25	100	52.546	Canis_lupus_dingo
ENSCVAG00000007828	cwc25	100	51.826	ENSCHIG00000015063	CWC25	100	51.259	Capra_hircus
ENSCVAG00000007828	cwc25	99	51.756	ENSCAPG00000014542	CWC25	99	51.991	Cavia_aperea
ENSCVAG00000007828	cwc25	100	52.471	ENSCPOG00000015127	CWC25	100	53.957	Cavia_porcellus
ENSCVAG00000007828	cwc25	100	51.740	ENSCLAG00000017102	CWC25	86	75.352	Chinchilla_lanigera
ENSCVAG00000007828	cwc25	98	52.113	ENSCPBG00000027490	CWC25	88	50.588	Chrysemys_picta_bellii
ENSCVAG00000007828	cwc25	100	72.727	ENSCSEG00000016305	cwc25	100	71.253	Cynoglossus_semilaevis
ENSCVAG00000007828	cwc25	100	69.059	ENSDARG00000003382	cwc25	100	64.938	Danio_rerio
ENSCVAG00000007828	cwc25	100	47.317	ENSEBUG00000002947	cwc25	82	60.563	Eptatretus_burgeri
ENSCVAG00000007828	cwc25	62	63.008	ENSEASG00005001871	CWC25	100	48.894	Equus_asinus_asinus
ENSCVAG00000007828	cwc25	62	63.008	ENSECAG00000019122	CWC25	100	48.894	Equus_caballus
ENSCVAG00000007828	cwc25	100	69.471	ENSELUG00000009127	cwc25	100	68.434	Esox_lucius
ENSCVAG00000007828	cwc25	100	52.511	ENSFCAG00000028119	CWC25	100	51.030	Felis_catus
ENSCVAG00000007828	cwc25	100	89.027	ENSFHEG00000004754	cwc25	100	88.529	Fundulus_heteroclitus
ENSCVAG00000007828	cwc25	67	89.873	ENSGMOG00000013001	cwc25	68	89.759	Gadus_morhua
ENSCVAG00000007828	cwc25	100	51.147	ENSGALG00000001624	CWC25	100	49.531	Gallus_gallus
ENSCVAG00000007828	cwc25	100	87.781	ENSGAFG00000007492	cwc25	100	83.668	Gambusia_affinis
ENSCVAG00000007828	cwc25	100	69.811	ENSGACG00000018153	cwc25	100	73.759	Gasterosteus_aculeatus
ENSCVAG00000007828	cwc25	100	80.645	ENSHBUG00000001392	cwc25	100	77.667	Haplochromis_burtoni
ENSCVAG00000007828	cwc25	100	55.324	ENSHGLG00000014785	CWC25	100	52.752	Heterocephalus_glaber_female
ENSCVAG00000007828	cwc25	100	75.500	ENSHCOG00000002434	cwc25	100	75.500	Hippocampus_comes
ENSCVAG00000007828	cwc25	100	65.423	ENSIPUG00000012581	CWC25	100	65.174	Ictalurus_punctatus
ENSCVAG00000007828	cwc25	100	80.549	ENSKMAG00000015418	cwc25	99	77.250	Kryptolebias_marmoratus
ENSCVAG00000007828	cwc25	100	56.429	ENSLOCG00000013707	cwc25	100	57.619	Lepisosteus_oculatus
ENSCVAG00000007828	cwc25	100	80.151	ENSMAMG00000005194	cwc25	100	76.884	Mastacembelus_armatus
ENSCVAG00000007828	cwc25	100	81.390	ENSMZEG00005012421	cwc25	100	78.412	Maylandia_zebra
ENSCVAG00000007828	cwc25	99	50.350	ENSMGAG00000005158	CWC25	99	50.234	Meleagris_gallopavo
ENSCVAG00000007828	cwc25	100	53.103	ENSMODG00000012627	CWC25	100	48.989	Monodelphis_domestica
ENSCVAG00000007828	cwc25	100	76.773	ENSMALG00000005638	cwc25	100	74.447	Monopterus_albus
ENSCVAG00000007828	cwc25	100	52.347	MGP_CAROLIEiJ_G0017064	Cwc25	100	49.661	Mus_caroli
ENSCVAG00000007828	cwc25	100	52.914	MGP_PahariEiJ_G0018193	Cwc25	69	74.648	Mus_pahari
ENSCVAG00000007828	cwc25	100	52.448	MGP_SPRETEiJ_G0017910	Cwc25	79	74.648	Mus_spretus
ENSCVAG00000007828	cwc25	100	51.157	ENSMPUG00000015077	CWC25	100	48.770	Mustela_putorius_furo
ENSCVAG00000007828	cwc25	100	52.392	ENSMLUG00000029653	CWC25	100	48.678	Myotis_lucifugus
ENSCVAG00000007828	cwc25	100	53.425	ENSNGAG00000007394	Cwc25	100	47.672	Nannospalax_galili
ENSCVAG00000007828	cwc25	98	51.282	ENSMEUG00000004156	CWC25	100	47.836	Notamacropus_eugenii
ENSCVAG00000007828	cwc25	100	53.865	ENSODEG00000017487	CWC25	100	52.830	Octodon_degus
ENSCVAG00000007828	cwc25	100	81.390	ENSONIG00000003251	cwc25	100	78.412	Oreochromis_niloticus
ENSCVAG00000007828	cwc25	100	73.618	ENSORLG00000018569	cwc25	100	73.116	Oryzias_latipes
ENSCVAG00000007828	cwc25	100	75.126	ENSORLG00020012087	cwc25	100	74.623	Oryzias_latipes_hni
ENSCVAG00000007828	cwc25	100	75.126	ENSORLG00015011062	cwc25	100	72.613	Oryzias_latipes_hsok
ENSCVAG00000007828	cwc25	100	73.869	ENSOMEG00000019365	cwc25	100	73.869	Oryzias_melastigma
ENSCVAG00000007828	cwc25	100	53.598	ENSOGAG00000008785	CWC25	100	53.598	Otolemur_garnettii
ENSCVAG00000007828	cwc25	100	51.370	ENSOARG00000009937	CWC25	100	51.716	Ovis_aries
ENSCVAG00000007828	cwc25	100	52.511	ENSPPRG00000005029	CWC25	100	51.259	Panthera_pardus
ENSCVAG00000007828	cwc25	100	52.511	ENSPTIG00000020264	CWC25	100	51.259	Panthera_tigris_altaica
ENSCVAG00000007828	cwc25	100	61.750	ENSPKIG00000007116	cwc25	100	60.199	Paramormyrops_kingsleyae
ENSCVAG00000007828	cwc25	100	87.781	ENSPFOG00000017152	cwc25	100	83.668	Poecilia_formosa
ENSCVAG00000007828	cwc25	96	87.273	ENSPLAG00000004535	cwc25	100	82.984	Poecilia_latipinna
ENSCVAG00000007828	cwc25	100	87.531	ENSPMEG00000023752	cwc25	100	83.417	Poecilia_mexicana
ENSCVAG00000007828	cwc25	98	51.852	ENSPVAG00000002273	CWC25	54	62.979	Pteropus_vampyrus
ENSCVAG00000007828	cwc25	100	66.418	ENSPNAG00000028668	cwc25	100	63.433	Pygocentrus_nattereri
ENSCVAG00000007828	cwc25	100	53.953	ENSRNOG00000004091	Cwc25	100	51.011	Rattus_norvegicus
ENSCVAG00000007828	cwc25	100	51.716	ENSRBIG00000033457	CWC25	100	50.221	Rhinopithecus_bieti
ENSCVAG00000007828	cwc25	100	51.716	ENSRROG00000039968	CWC25	100	49.779	Rhinopithecus_roxellana
ENSCVAG00000007828	cwc25	100	52.326	ENSSHAG00000017267	CWC25	100	48.874	Sarcophilus_harrisii
ENSCVAG00000007828	cwc25	100	61.179	ENSSFOG00015003449	cwc25	100	58.738	Scleropages_formosus
ENSCVAG00000007828	cwc25	100	80.348	ENSSMAG00000010953	cwc25	100	80.348	Scophthalmus_maximus
ENSCVAG00000007828	cwc25	100	83.333	ENSSDUG00000004302	cwc25	100	83.333	Seriola_dumerili
ENSCVAG00000007828	cwc25	100	82.587	ENSSLDG00000005761	cwc25	100	82.587	Seriola_lalandi_dorsalis
ENSCVAG00000007828	cwc25	100	54.699	ENSSSCG00000021478	CWC25	100	51.069	Sus_scrofa
ENSCVAG00000007828	cwc25	100	77.307	ENSTRUG00000004650	cwc25	100	75.377	Takifugu_rubripes
ENSCVAG00000007828	cwc25	100	72.886	ENSTNIG00000014143	cwc25	100	70.927	Tetraodon_nigroviridis
ENSCVAG00000007828	cwc25	69	75.625	ENSTBEG00000013187	CWC25	66	75.625	Tupaia_belangeri
ENSCVAG00000007828	cwc25	100	52.283	ENSUAMG00000005592	CWC25	100	48.894	Ursus_americanus
ENSCVAG00000007828	cwc25	100	51.598	ENSUMAG00000017097	CWC25	100	48.894	Ursus_maritimus
ENSCVAG00000007828	cwc25	68	76.101	ENSVPAG00000005680	CWC25	66	76.101	Vicugna_pacos
ENSCVAG00000007828	cwc25	100	52.036	ENSVVUG00000002182	CWC25	100	52.546	Vulpes_vulpes
ENSCVAG00000007828	cwc25	98	58.690	ENSXETG00000023722	cwc25	100	56.962	Xenopus_tropicalis
ENSCVAG00000007828	cwc25	100	86.534	ENSXMAG00000018113	cwc25	100	82.915	Xiphophorus_maculatus