EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000007856 (Gene tree)
Gene ID: 107101438
Gene Symbol: akap1b
Alias: akap1|fa08b04|wu:fa08b04
Full Name: A-kinase anchoring protein 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 19189 bases
Position: chrKL653595.1:51900-71088
Accession: 107101438
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000006249	KH_1	PF00013.29	2.5e-08	1	1
ENSCVAP00000006279	KH_1	PF00013.29	3.2e-08	1	1
ENSCVAP00000006279	TUDOR	PF00567.24	3.7e-15	1	1
ENSCVAP00000006249	TUDOR	PF00567.24	3.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000005308	-	2172	-	ENSCVAP00000006249	723 (aa)	-	-
ENSCVAT00000005275	-	2325	XM_015400357	ENSCVAP00000006279	774 (aa)	XP_015255843	-

Gene Model

Click here to download ENSCVAG00000007856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007856	akap1b	57	52.778	ENSG00000121057	AKAP1	88	67.742	Homo_sapiens
ENSCVAG00000007856	akap1b	100	51.557	ENSAPOG00000015611	akap1b	100	51.034	Acanthochromis_polyacanthus
ENSCVAG00000007856	akap1b	59	45.921	ENSAMEG00000002704	AKAP1	54	45.833	Ailuropoda_melanoleuca
ENSCVAG00000007856	akap1b	100	50.233	ENSACIG00000011298	akap1b	100	49.650	Amphilophus_citrinellus
ENSCVAG00000007856	akap1b	100	50.750	ENSAOCG00000014786	akap1b	100	50.230	Amphiprion_ocellaris
ENSCVAG00000007856	akap1b	100	53.613	ENSAPEG00000007202	akap1b	99	58.612	Amphiprion_percula
ENSCVAG00000007856	akap1b	100	47.514	ENSATEG00000004754	akap1b	100	46.998	Anabas_testudineus
ENSCVAG00000007856	akap1b	53	45.093	ENSANAG00000032242	AKAP1	53	45.093	Aotus_nancymaae
ENSCVAG00000007856	akap1b	100	48.101	ENSACLG00000022390	akap1b	100	48.276	Astatotilapia_calliptera
ENSCVAG00000007856	akap1b	94	30.506	ENSAMXG00000033797	akap1a	53	42.063	Astyanax_mexicanus
ENSCVAG00000007856	akap1b	94	64.407	ENSAMXG00000024876	akap1b	82	64.407	Astyanax_mexicanus
ENSCVAG00000007856	akap1b	60	47.059	ENSCAFG00000017409	AKAP1	56	47.059	Canis_familiaris
ENSCVAG00000007856	akap1b	60	47.059	ENSCAFG00020025614	AKAP1	55	47.059	Canis_lupus_dingo
ENSCVAG00000007856	akap1b	59	51.282	ENSCAPG00000016471	AKAP1	56	57.143	Cavia_aperea
ENSCVAG00000007856	akap1b	78	44.681	ENSCPOG00000013327	AKAP1	57	44.681	Cavia_porcellus
ENSCVAG00000007856	akap1b	53	47.917	ENSCCAG00000023539	AKAP1	61	46.486	Cebus_capucinus
ENSCVAG00000007856	akap1b	60	46.512	ENSCATG00000043975	AKAP1	53	46.083	Cercocebus_atys
ENSCVAG00000007856	akap1b	59	46.512	ENSCSAG00000005628	AKAP1	52	46.083	Chlorocebus_sabaeus
ENSCVAG00000007856	akap1b	56	71.875	ENSCPBG00000010075	AKAP1	52	71.875	Chrysemys_picta_bellii
ENSCVAG00000007856	akap1b	52	45.977	ENSCANG00000042158	-	61	45.745	Colobus_angolensis_palliatus
ENSCVAG00000007856	akap1b	59	46.512	ENSCANG00000011430	-	53	46.083	Colobus_angolensis_palliatus
ENSCVAG00000007856	akap1b	99	45.809	ENSCSEG00000004730	akap1b	99	44.302	Cynoglossus_semilaevis
ENSCVAG00000007856	akap1b	95	66.102	ENSDARG00000006062	akap1b	83	66.102	Danio_rerio
ENSCVAG00000007856	akap1b	60	46.330	ENSDORG00000030157	Akap1	57	45.517	Dipodomys_ordii
ENSCVAG00000007856	akap1b	78	50.000	ENSEASG00005002989	AKAP1	72	50.000	Equus_asinus_asinus
ENSCVAG00000007856	akap1b	78	50.000	ENSECAG00000009841	AKAP1	73	50.000	Equus_caballus
ENSCVAG00000007856	akap1b	91	60.656	ENSELUG00000001045	akap1b	100	44.233	Esox_lucius
ENSCVAG00000007856	akap1b	59	45.455	ENSFDAG00000014839	AKAP1	56	45.455	Fukomys_damarensis
ENSCVAG00000007856	akap1b	91	62.681	ENSFHEG00000020302	akap1b	98	61.518	Fundulus_heteroclitus
ENSCVAG00000007856	akap1b	91	84.286	ENSGMOG00000015334	akap1b	83	61.429	Gadus_morhua
ENSCVAG00000007856	akap1b	71	43.655	ENSGALG00000005575	AKAP1	65	43.147	Gallus_gallus
ENSCVAG00000007856	akap1b	100	61.198	ENSGAFG00000010957	akap1b	100	60.697	Gambusia_affinis
ENSCVAG00000007856	akap1b	90	74.074	ENSGACG00000013633	akap1b	100	46.363	Gasterosteus_aculeatus
ENSCVAG00000007856	akap1b	56	71.875	ENSGAGG00000016534	AKAP1	52	71.875	Gopherus_agassizii
ENSCVAG00000007856	akap1b	57	52.778	ENSGGOG00000011719	AKAP1	68	52.778	Gorilla_gorilla
ENSCVAG00000007856	akap1b	75	58.065	ENSHGLG00000014384	AKAP1	72	58.065	Heterocephalus_glaber_female
ENSCVAG00000007856	akap1b	71	37.217	ENSHGLG00100002765	AKAP1	70	37.316	Heterocephalus_glaber_male
ENSCVAG00000007856	akap1b	100	45.751	ENSHCOG00000012771	akap1b	100	45.771	Hippocampus_comes
ENSCVAG00000007856	akap1b	90	56.667	ENSIPUG00000003688	akap1b	83	56.667	Ictalurus_punctatus
ENSCVAG00000007856	akap1b	100	51.469	ENSKMAG00000013600	akap1b	100	51.054	Kryptolebias_marmoratus
ENSCVAG00000007856	akap1b	100	50.246	ENSLBEG00000016545	akap1b	100	50.431	Labrus_bergylta
ENSCVAG00000007856	akap1b	77	56.098	ENSLACG00000016864	AKAP1	72	56.098	Latimeria_chalumnae
ENSCVAG00000007856	akap1b	100	43.434	ENSLOCG00000004703	akap1b	100	39.866	Lepisosteus_oculatus
ENSCVAG00000007856	akap1b	81	55.319	ENSLAFG00000015929	AKAP1	73	55.319	Loxodonta_africana
ENSCVAG00000007856	akap1b	59	46.512	ENSMFAG00000042936	AKAP1	52	46.083	Macaca_fascicularis
ENSCVAG00000007856	akap1b	57	46.190	ENSMMUG00000012644	AKAP1	66	67.500	Macaca_mulatta
ENSCVAG00000007856	akap1b	59	46.512	ENSMNEG00000001016	AKAP1	52	46.083	Macaca_nemestrina
ENSCVAG00000007856	akap1b	59	46.512	ENSMLEG00000036269	AKAP1	53	46.083	Mandrillus_leucophaeus
ENSCVAG00000007856	akap1b	100	51.223	ENSMAMG00000003966	akap1b	100	49.483	Mastacembelus_armatus
ENSCVAG00000007856	akap1b	100	48.101	ENSMZEG00005000637	akap1b	100	48.276	Maylandia_zebra
ENSCVAG00000007856	akap1b	71	43.993	ENSMGAG00000008300	AKAP1	64	43.486	Meleagris_gallopavo
ENSCVAG00000007856	akap1b	100	49.584	ENSMMOG00000010029	akap1b	100	52.564	Mola_mola
ENSCVAG00000007856	akap1b	94	85.000	ENSMALG00000000761	akap1b	100	48.907	Monopterus_albus
ENSCVAG00000007856	akap1b	54	50.000	ENSMPUG00000015380	AKAP1	55	50.000	Mustela_putorius_furo
ENSCVAG00000007856	akap1b	54	47.917	ENSMLUG00000010820	AKAP1	54	47.917	Myotis_lucifugus
ENSCVAG00000007856	akap1b	100	47.641	ENSNBRG00000006439	akap1b	100	47.816	Neolamprologus_brichardi
ENSCVAG00000007856	akap1b	60	46.275	ENSNLEG00000031371	AKAP1	54	45.638	Nomascus_leucogenys
ENSCVAG00000007856	akap1b	60	67.416	ENSMEUG00000003844	AKAP1	53	67.416	Notamacropus_eugenii
ENSCVAG00000007856	akap1b	92	61.379	ENSONIG00000014829	akap1b	99	61.697	Oreochromis_niloticus
ENSCVAG00000007856	akap1b	57	67.568	ENSOANG00000005674	AKAP1	54	67.568	Ornithorhynchus_anatinus
ENSCVAG00000007856	akap1b	59	45.266	ENSOCUG00000017563	AKAP1	54	44.444	Oryctolagus_cuniculus
ENSCVAG00000007856	akap1b	100	49.175	ENSORLG00020007559	akap1b	83	71.667	Oryzias_latipes_hni
ENSCVAG00000007856	akap1b	100	48.763	ENSOMEG00000013912	akap1b	82	66.667	Oryzias_melastigma
ENSCVAG00000007856	akap1b	63	46.460	ENSOGAG00000011014	AKAP1	54	58.065	Otolemur_garnettii
ENSCVAG00000007856	akap1b	52	52.367	ENSOARG00000007626	AKAP1	54	51.632	Ovis_aries
ENSCVAG00000007856	akap1b	57	52.778	ENSPPAG00000031095	AKAP1	53	52.778	Pan_paniscus
ENSCVAG00000007856	akap1b	54	47.059	ENSPTIG00000016355	AKAP1	54	47.059	Panthera_tigris_altaica
ENSCVAG00000007856	akap1b	57	52.778	ENSPTRG00000009436	AKAP1	53	52.778	Pan_troglodytes
ENSCVAG00000007856	akap1b	59	46.512	ENSPANG00000022318	AKAP1	52	46.083	Papio_anubis
ENSCVAG00000007856	akap1b	90	56.667	ENSPKIG00000017133	akap1b	84	56.667	Paramormyrops_kingsleyae
ENSCVAG00000007856	akap1b	77	71.875	ENSPSIG00000007675	AKAP1	69	71.875	Pelodiscus_sinensis
ENSCVAG00000007856	akap1b	100	46.341	ENSPMGG00000011644	akap1b	100	46.252	Periophthalmus_magnuspinnatus
ENSCVAG00000007856	akap1b	63	49.309	ENSPCIG00000006037	AKAP1	57	48.730	Phascolarctos_cinereus
ENSCVAG00000007856	akap1b	100	62.515	ENSPFOG00000005623	akap1b	100	62.019	Poecilia_formosa
ENSCVAG00000007856	akap1b	100	62.635	ENSPLAG00000005425	akap1b	100	62.139	Poecilia_latipinna
ENSCVAG00000007856	akap1b	100	62.395	ENSPMEG00000016287	akap1b	100	61.899	Poecilia_mexicana
ENSCVAG00000007856	akap1b	100	62.515	ENSPREG00000014531	akap1b	100	61.538	Poecilia_reticulata
ENSCVAG00000007856	akap1b	60	46.275	ENSPPYG00000008245	AKAP1	54	45.638	Pongo_abelii
ENSCVAG00000007856	akap1b	58	55.814	ENSPCAG00000013847	AKAP1	53	55.814	Procavia_capensis
ENSCVAG00000007856	akap1b	100	48.216	ENSPNYG00000020264	akap1b	100	48.391	Pundamilia_nyererei
ENSCVAG00000007856	akap1b	100	44.023	ENSPNAG00000000820	akap1b	100	40.934	Pygocentrus_nattereri
ENSCVAG00000007856	akap1b	97	31.475	ENSPNAG00000014984	akap1a	99	31.415	Pygocentrus_nattereri
ENSCVAG00000007856	akap1b	59	46.512	ENSRBIG00000033113	AKAP1	52	46.083	Rhinopithecus_bieti
ENSCVAG00000007856	akap1b	71	46.512	ENSRROG00000010936	AKAP1	52	46.083	Rhinopithecus_roxellana
ENSCVAG00000007856	akap1b	67	46.799	ENSSHAG00000013278	AKAP1	61	46.256	Sarcophilus_harrisii
ENSCVAG00000007856	akap1b	95	51.852	ENSSFOG00015012205	akap1	100	41.921	Scleropages_formosus
ENSCVAG00000007856	akap1b	100	48.280	ENSSMAG00000015934	akap1b	100	47.581	Scophthalmus_maximus
ENSCVAG00000007856	akap1b	100	52.982	ENSSDUG00000019393	akap1b	100	53.036	Seriola_dumerili
ENSCVAG00000007856	akap1b	100	53.265	ENSSLDG00000001859	akap1b	100	52.517	Seriola_lalandi_dorsalis
ENSCVAG00000007856	akap1b	100	52.079	ENSSPAG00000005133	akap1b	100	51.554	Stegastes_partitus
ENSCVAG00000007856	akap1b	59	46.759	ENSSSCG00000034994	AKAP1	54	46.000	Sus_scrofa
ENSCVAG00000007856	akap1b	100	47.522	ENSTRUG00000005669	akap1	100	48.030	Takifugu_rubripes
ENSCVAG00000007856	akap1b	100	45.165	ENSTNIG00000004987	akap1b	100	45.489	Tetraodon_nigroviridis
ENSCVAG00000007856	akap1b	72	37.308	ENSTTRG00000002188	AKAP1	70	36.177	Tursiops_truncatus
ENSCVAG00000007856	akap1b	55	50.000	ENSUAMG00000007244	AKAP1	52	50.000	Ursus_americanus
ENSCVAG00000007856	akap1b	60	47.059	ENSVVUG00000011740	AKAP1	55	47.059	Vulpes_vulpes
ENSCVAG00000007856	akap1b	100	61.317	ENSXCOG00000005417	akap1b	100	60.577	Xiphophorus_couchianus
ENSCVAG00000007856	akap1b	100	61.078	ENSXMAG00000012222	akap1b	100	60.337	Xiphophorus_maculatus