EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000007894 (Gene tree)
Gene ID: 107094431
Gene Symbol: esf1
Alias: fe06g12|im:7138472|wu:fe06g12|zgc:66241
Full Name: ESF1 nucleolar pre-rRNA processing protein homolog
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 6779 bases
Position: chrKL652981.1:897962-904740
Accession: 107094431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000006340	NUC153	PF08159.12	6.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000005164	-	2130	XM_015390018	ENSCVAP00000006340	709 (aa)	XP_015245504	-

Gene Model

Click here to download ENSCVAG00000007894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007894's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007894	esf1	91	74.648	ENSG00000089048	ESF1	72	75.385	Homo_sapiens
ENSCVAG00000007894	esf1	72	71.374	ENSAPOG00000003004	esf1	99	72.328	Acanthochromis_polyacanthus
ENSCVAG00000007894	esf1	91	68.056	ENSAMEG00000008830	ESF1	73	75.385	Ailuropoda_melanoleuca
ENSCVAG00000007894	esf1	99	72.727	ENSACIG00000018305	esf1	99	73.554	Amphilophus_citrinellus
ENSCVAG00000007894	esf1	99	67.385	ENSAOCG00000006033	esf1	99	74.708	Amphiprion_ocellaris
ENSCVAG00000007894	esf1	99	69.029	ENSAPEG00000022385	esf1	99	67.900	Amphiprion_percula
ENSCVAG00000007894	esf1	94	74.324	ENSATEG00000016321	esf1	85	74.324	Anabas_testudineus
ENSCVAG00000007894	esf1	92	64.103	ENSAPLG00000012113	ESF1	78	62.803	Anas_platyrhynchos
ENSCVAG00000007894	esf1	93	66.667	ENSACAG00000000963	ESF1	75	65.278	Anolis_carolinensis
ENSCVAG00000007894	esf1	93	69.620	ENSANAG00000036778	ESF1	73	73.846	Aotus_nancymaae
ENSCVAG00000007894	esf1	99	68.792	ENSACLG00000002972	esf1	99	68.924	Astatotilapia_calliptera
ENSCVAG00000007894	esf1	81	65.979	ENSAMXG00000001172	esf1	99	63.165	Astyanax_mexicanus
ENSCVAG00000007894	esf1	91	66.667	ENSBTAG00000007130	ESF1	72	73.846	Bos_taurus
ENSCVAG00000007894	esf1	99	55.775	ENSCJAG00000004640	ESF1	73	73.846	Callithrix_jacchus
ENSCVAG00000007894	esf1	91	66.667	ENSCAFG00000005587	ESF1	73	73.846	Canis_familiaris
ENSCVAG00000007894	esf1	91	66.667	ENSCAFG00020027530	ESF1	73	73.846	Canis_lupus_dingo
ENSCVAG00000007894	esf1	95	66.667	ENSCHIG00000021188	ESF1	74	73.846	Capra_hircus
ENSCVAG00000007894	esf1	94	74.603	ENSTSYG00000009956	ESF1	73	73.846	Carlito_syrichta
ENSCVAG00000007894	esf1	99	54.039	ENSCAPG00000010333	-	99	52.368	Cavia_aperea
ENSCVAG00000007894	esf1	90	73.016	ENSCAPG00000010466	-	50	72.308	Cavia_aperea
ENSCVAG00000007894	esf1	90	71.429	ENSCPOG00000014027	-	74	70.769	Cavia_porcellus
ENSCVAG00000007894	esf1	99	69.620	ENSCCAG00000024521	ESF1	73	73.846	Cebus_capucinus
ENSCVAG00000007894	esf1	90	74.603	ENSCATG00000042792	ESF1	73	73.846	Cercocebus_atys
ENSCVAG00000007894	esf1	90	74.603	ENSCLAG00000013266	-	74	73.846	Chinchilla_lanigera
ENSCVAG00000007894	esf1	90	74.603	ENSCSAG00000011777	ESF1	73	73.846	Chlorocebus_sabaeus
ENSCVAG00000007894	esf1	89	38.520	ENSCING00000020446	-	77	39.104	Ciona_intestinalis
ENSCVAG00000007894	esf1	76	46.078	ENSCSAVG00000009015	-	90	43.516	Ciona_savignyi
ENSCVAG00000007894	esf1	90	74.603	ENSCANG00000030674	ESF1	72	73.846	Colobus_angolensis_palliatus
ENSCVAG00000007894	esf1	91	66.667	ENSCGRG00001018257	Esf1	74	73.846	Cricetulus_griseus_chok1gshd
ENSCVAG00000007894	esf1	81	69.329	ENSCSEG00000001159	esf1	97	64.533	Cynoglossus_semilaevis
ENSCVAG00000007894	esf1	91	63.889	ENSDNOG00000019409	ESF1	73	70.769	Dasypus_novemcinctus
ENSCVAG00000007894	esf1	91	68.571	ENSDORG00000016313	Esf1	74	73.846	Dipodomys_ordii
ENSCVAG00000007894	esf1	98	38.859	FBgn0024364	CG11417	94	38.462	Drosophila_melanogaster
ENSCVAG00000007894	esf1	91	70.270	ENSEBUG00000015161	esf1	76	70.769	Eptatretus_burgeri
ENSCVAG00000007894	esf1	91	66.667	ENSEASG00005001777	ESF1	73	73.846	Equus_asinus_asinus
ENSCVAG00000007894	esf1	91	66.667	ENSECAG00000019188	ESF1	73	73.846	Equus_caballus
ENSCVAG00000007894	esf1	72	49.065	ENSEEUG00000015837	-	75	48.357	Erinaceus_europaeus
ENSCVAG00000007894	esf1	81	68.046	ENSELUG00000000408	esf1	85	68.212	Esox_lucius
ENSCVAG00000007894	esf1	90	75.806	ENSFCAG00000000919	ESF1	72	75.385	Felis_catus
ENSCVAG00000007894	esf1	91	69.014	ENSFALG00000010914	ESF1	77	63.258	Ficedula_albicollis
ENSCVAG00000007894	esf1	95	74.603	ENSFDAG00000014777	ESF1	75	73.846	Fukomys_damarensis
ENSCVAG00000007894	esf1	72	74.857	ENSFHEG00000014984	esf1	100	75.810	Fundulus_heteroclitus
ENSCVAG00000007894	esf1	92	65.385	ENSGALG00000034768	ESF1	74	64.865	Gallus_gallus
ENSCVAG00000007894	esf1	100	67.862	ENSGAFG00000000540	esf1	100	69.262	Gambusia_affinis
ENSCVAG00000007894	esf1	90	76.190	ENSGGOG00000006692	ESF1	72	75.385	Gorilla_gorilla
ENSCVAG00000007894	esf1	99	69.894	ENSHBUG00000001890	esf1	99	69.098	Haplochromis_burtoni
ENSCVAG00000007894	esf1	90	73.016	ENSHGLG00000011505	ESF1	75	72.308	Heterocephalus_glaber_female
ENSCVAG00000007894	esf1	90	73.016	ENSHGLG00100015045	ESF1	75	72.308	Heterocephalus_glaber_male
ENSCVAG00000007894	esf1	81	62.988	ENSIPUG00000006507	esf1	76	64.686	Ictalurus_punctatus
ENSCVAG00000007894	esf1	96	74.603	ENSSTOG00000009846	ESF1	74	73.846	Ictidomys_tridecemlineatus
ENSCVAG00000007894	esf1	90	77.778	ENSJJAG00000012570	Esf1	73	76.923	Jaculus_jaculus
ENSCVAG00000007894	esf1	92	70.000	ENSLACG00000016439	ESF1	74	71.233	Latimeria_chalumnae
ENSCVAG00000007894	esf1	93	67.857	ENSLOCG00000015979	esf1	85	66.156	Lepisosteus_oculatus
ENSCVAG00000007894	esf1	99	65.278	ENSLAFG00000005479	ESF1	78	72.308	Loxodonta_africana
ENSCVAG00000007894	esf1	90	74.603	ENSMFAG00000036841	ESF1	73	73.846	Macaca_fascicularis
ENSCVAG00000007894	esf1	90	74.603	ENSMNEG00000044042	ESF1	73	73.846	Macaca_nemestrina
ENSCVAG00000007894	esf1	90	73.016	ENSMLEG00000037121	ESF1	73	72.308	Mandrillus_leucophaeus
ENSCVAG00000007894	esf1	100	69.841	ENSMAMG00000018648	esf1	100	73.218	Mastacembelus_armatus
ENSCVAG00000007894	esf1	72	73.256	ENSMZEG00005013912	esf1	99	72.287	Maylandia_zebra
ENSCVAG00000007894	esf1	96	65.385	ENSMGAG00000004291	ESF1	77	64.187	Meleagris_gallopavo
ENSCVAG00000007894	esf1	91	66.667	ENSMAUG00000015975	Esf1	74	73.846	Mesocricetus_auratus
ENSCVAG00000007894	esf1	90	74.603	ENSMICG00000010711	ESF1	72	73.846	Microcebus_murinus
ENSCVAG00000007894	esf1	91	66.667	ENSMOCG00000005902	Esf1	74	73.846	Microtus_ochrogaster
ENSCVAG00000007894	esf1	72	74.480	ENSMMOG00000018693	esf1	100	74.237	Mola_mola
ENSCVAG00000007894	esf1	91	71.831	ENSMODG00000005066	ESF1	75	70.769	Monodelphis_domestica
ENSCVAG00000007894	esf1	94	65.585	ENSMALG00000007338	esf1	95	65.162	Monopterus_albus
ENSCVAG00000007894	esf1	91	68.056	MGP_CAROLIEiJ_G0024365	Esf1	73	74.242	Mus_caroli
ENSCVAG00000007894	esf1	91	69.444	ENSMUSG00000045624	Esf1	73	75.758	Mus_musculus
ENSCVAG00000007894	esf1	91	68.056	MGP_PahariEiJ_G0025810	Esf1	73	74.242	Mus_pahari
ENSCVAG00000007894	esf1	91	69.444	MGP_SPRETEiJ_G0025285	Esf1	73	75.758	Mus_spretus
ENSCVAG00000007894	esf1	91	68.056	ENSMPUG00000001450	ESF1	73	75.385	Mustela_putorius_furo
ENSCVAG00000007894	esf1	90	73.016	ENSMLUG00000013080	ESF1	73	72.308	Myotis_lucifugus
ENSCVAG00000007894	esf1	90	76.190	ENSNLEG00000014563	ESF1	72	75.385	Nomascus_leucogenys
ENSCVAG00000007894	esf1	74	57.467	ENSOPRG00000004862	ESF1	99	57.278	Ochotona_princeps
ENSCVAG00000007894	esf1	96	66.667	ENSODEG00000006824	ESF1	76	73.846	Octodon_degus
ENSCVAG00000007894	esf1	95	76.623	ENSONIG00000006804	esf1	82	75.676	Oreochromis_niloticus
ENSCVAG00000007894	esf1	94	59.487	ENSOANG00000008432	-	77	64.045	Ornithorhynchus_anatinus
ENSCVAG00000007894	esf1	90	74.603	ENSOCUG00000005414	ESF1	74	73.846	Oryctolagus_cuniculus
ENSCVAG00000007894	esf1	72	68.251	ENSORLG00000018625	esf1	100	68.762	Oryzias_latipes
ENSCVAG00000007894	esf1	100	67.843	ENSORLG00015022826	esf1	100	68.263	Oryzias_latipes_hsok
ENSCVAG00000007894	esf1	72	68.609	ENSOMEG00000009311	esf1	99	69.737	Oryzias_melastigma
ENSCVAG00000007894	esf1	90	71.429	ENSOGAG00000016912	ESF1	75	70.769	Otolemur_garnettii
ENSCVAG00000007894	esf1	91	66.667	ENSOARG00000011158	ESF1	70	73.846	Ovis_aries
ENSCVAG00000007894	esf1	90	74.603	ENSPPAG00000024379	ESF1	73	73.846	Pan_paniscus
ENSCVAG00000007894	esf1	90	75.806	ENSPPRG00000012007	ESF1	73	75.385	Panthera_pardus
ENSCVAG00000007894	esf1	90	75.806	ENSPTIG00000020063	ESF1	73	75.385	Panthera_tigris_altaica
ENSCVAG00000007894	esf1	90	74.603	ENSPTRG00000013258	ESF1	72	73.846	Pan_troglodytes
ENSCVAG00000007894	esf1	92	69.512	ENSPKIG00000024448	esf1	78	71.622	Paramormyrops_kingsleyae
ENSCVAG00000007894	esf1	96	80.000	ENSPMGG00000016911	esf1	82	78.378	Periophthalmus_magnuspinnatus
ENSCVAG00000007894	esf1	91	66.197	ENSPCIG00000019331	ESF1	76	65.753	Phascolarctos_cinereus
ENSCVAG00000007894	esf1	100	63.589	ENSPFOG00000010101	esf1	79	71.761	Poecilia_formosa
ENSCVAG00000007894	esf1	72	73.837	ENSPLAG00000006452	esf1	100	74.225	Poecilia_latipinna
ENSCVAG00000007894	esf1	100	68.792	ENSPMEG00000000713	esf1	79	74.411	Poecilia_mexicana
ENSCVAG00000007894	esf1	100	68.331	ENSPREG00000004431	esf1	77	73.862	Poecilia_reticulata
ENSCVAG00000007894	esf1	90	76.190	ENSPPYG00000010715	ESF1	72	75.385	Pongo_abelii
ENSCVAG00000007894	esf1	91	66.667	ENSPVAG00000001295	ESF1	66	73.846	Pteropus_vampyrus
ENSCVAG00000007894	esf1	99	70.400	ENSPNYG00000015735	esf1	99	68.400	Pundamilia_nyererei
ENSCVAG00000007894	esf1	91	71.622	ENSPNAG00000014721	esf1	83	75.385	Pygocentrus_nattereri
ENSCVAG00000007894	esf1	91	68.056	ENSRNOG00000004777	Esf1	73	74.242	Rattus_norvegicus
ENSCVAG00000007894	esf1	90	74.603	ENSRBIG00000035763	ESF1	73	73.846	Rhinopithecus_bieti
ENSCVAG00000007894	esf1	90	74.603	ENSRROG00000032022	ESF1	72	73.846	Rhinopithecus_roxellana
ENSCVAG00000007894	esf1	90	74.603	ENSSBOG00000030387	ESF1	72	73.846	Saimiri_boliviensis_boliviensis
ENSCVAG00000007894	esf1	98	63.889	ENSSHAG00000000449	ESF1	78	70.769	Sarcophilus_harrisii
ENSCVAG00000007894	esf1	100	71.508	ENSSDUG00000019460	esf1	100	72.917	Seriola_dumerili
ENSCVAG00000007894	esf1	93	66.250	ENSSPUG00000012635	ESF1	80	64.773	Sphenodon_punctatus
ENSCVAG00000007894	esf1	99	67.613	ENSSPAG00000019077	esf1	99	68.509	Stegastes_partitus
ENSCVAG00000007894	esf1	91	68.056	ENSSSCG00000007077	ESF1	72	75.385	Sus_scrofa
ENSCVAG00000007894	esf1	90	71.429	ENSTGUG00000002450	ESF1	72	70.769	Taeniopygia_guttata
ENSCVAG00000007894	esf1	99	63.930	ENSTRUG00000009445	esf1	77	68.924	Takifugu_rubripes
ENSCVAG00000007894	esf1	62	59.643	ENSTBEG00000008552	ESF1	52	61.594	Tupaia_belangeri
ENSCVAG00000007894	esf1	91	65.278	ENSTTRG00000005335	ESF1	72	72.308	Tursiops_truncatus
ENSCVAG00000007894	esf1	91	66.667	ENSUMAG00000008579	ESF1	73	73.846	Ursus_maritimus
ENSCVAG00000007894	esf1	82	69.076	ENSVPAG00000005291	ESF1	65	75.385	Vicugna_pacos
ENSCVAG00000007894	esf1	91	66.667	ENSVVUG00000014318	ESF1	68	73.846	Vulpes_vulpes
ENSCVAG00000007894	esf1	91	59.459	ENSXETG00000008079	esf1	78	66.154	Xenopus_tropicalis
ENSCVAG00000007894	esf1	100	66.938	ENSXMAG00000017651	esf1	100	66.304	Xiphophorus_maculatus