EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000007907 (Gene tree)
Gene ID: 107087653
Gene Symbol: farsa
Alias: farsla|wu:fj21a11|zgc:136506|zgc:158185
Full Name: phenylalanyl-tRNA synthetase subunit alpha
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 13643 bases
Position: chrKL652690.1:161072-174714
Accession: 107087653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000006341	tRNA-synt_2d	PF01409.20	4.5e-90	1	1
ENSCVAP00000006332	tRNA-synt_2d	PF01409.20	3.8e-73	1	2
ENSCVAP00000006332	tRNA-synt_2d	PF01409.20	3.8e-73	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000005180	-	1413	-	ENSCVAP00000006332	470 (aa)	-	-
ENSCVAT00000005159	-	2659	XM_015379340	ENSCVAP00000006341	497 (aa)	XP_015234826	UPI00074280DE

Gene Model

Click here to download ENSCVAG00000007907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007907	farsa	100	75.855	ENSG00000179115	FARSA	99	76.048	Homo_sapiens
ENSCVAG00000007907	farsa	100	91.348	ENSAPOG00000011465	farsa	100	91.348	Acanthochromis_polyacanthus
ENSCVAG00000007907	farsa	100	75.252	ENSAMEG00000012446	FARSA	98	75.252	Ailuropoda_melanoleuca
ENSCVAG00000007907	farsa	100	91.277	ENSACIG00000020499	farsa	100	91.277	Amphilophus_citrinellus
ENSCVAG00000007907	farsa	100	91.952	ENSAOCG00000000581	farsa	100	91.952	Amphiprion_ocellaris
ENSCVAG00000007907	farsa	100	91.751	ENSAPEG00000017695	farsa	100	91.751	Amphiprion_percula
ENSCVAG00000007907	farsa	100	82.093	ENSATEG00000012807	farsa	100	82.093	Anabas_testudineus
ENSCVAG00000007907	farsa	100	80.679	ENSATEG00000012633	farsa	100	80.679	Anabas_testudineus
ENSCVAG00000007907	farsa	99	76.613	ENSACAG00000017166	FARSA	84	76.613	Anolis_carolinensis
ENSCVAG00000007907	farsa	100	75.050	ENSANAG00000037420	FARSA	98	75.050	Aotus_nancymaae
ENSCVAG00000007907	farsa	100	91.348	ENSACLG00000001716	farsa	100	91.348	Astatotilapia_calliptera
ENSCVAG00000007907	farsa	100	85.312	ENSAMXG00000037912	farsa	100	85.312	Astyanax_mexicanus
ENSCVAG00000007907	farsa	100	75.050	ENSBTAG00000021374	FARSA	98	75.050	Bos_taurus
ENSCVAG00000007907	farsa	96	62.105	WBGene00001497	fars-1	94	62.105	Caenorhabditis_elegans
ENSCVAG00000007907	farsa	99	74.597	ENSCJAG00000004686	FARSA	98	71.227	Callithrix_jacchus
ENSCVAG00000007907	farsa	100	75.855	ENSCAFG00000017096	FARSA	98	75.855	Canis_familiaris
ENSCVAG00000007907	farsa	100	75.855	ENSCAFG00020005315	FARSA	98	75.855	Canis_lupus_dingo
ENSCVAG00000007907	farsa	100	71.142	ENSCHIG00000022617	FARSA	98	71.142	Capra_hircus
ENSCVAG00000007907	farsa	92	72.052	ENSTSYG00000002595	FARSA	83	72.052	Carlito_syrichta
ENSCVAG00000007907	farsa	90	75.446	ENSCAPG00000011353	FARSA	95	75.446	Cavia_aperea
ENSCVAG00000007907	farsa	100	74.447	ENSCPOG00000000787	FARSA	98	74.447	Cavia_porcellus
ENSCVAG00000007907	farsa	100	75.050	ENSCCAG00000028176	FARSA	98	75.050	Cebus_capucinus
ENSCVAG00000007907	farsa	99	74.395	ENSCLAG00000015489	FARSA	98	74.395	Chinchilla_lanigera
ENSCVAG00000007907	farsa	94	76.395	ENSCSAG00000006530	FARSA	98	76.395	Chlorocebus_sabaeus
ENSCVAG00000007907	farsa	96	80.376	ENSCPBG00000023915	FARSA	99	78.600	Chrysemys_picta_bellii
ENSCVAG00000007907	farsa	99	67.203	ENSCING00000002567	-	99	67.203	Ciona_intestinalis
ENSCVAG00000007907	farsa	99	68.410	ENSCSAVG00000010683	-	98	68.410	Ciona_savignyi
ENSCVAG00000007907	farsa	100	75.654	ENSCANG00000043649	-	98	75.654	Colobus_angolensis_palliatus
ENSCVAG00000007907	farsa	100	75.453	ENSCGRG00001019769	Farsa	98	75.453	Cricetulus_griseus_chok1gshd
ENSCVAG00000007907	farsa	100	75.453	ENSCGRG00000013415	Farsa	98	75.453	Cricetulus_griseus_crigri
ENSCVAG00000007907	farsa	100	89.537	ENSCSEG00000016214	farsa	96	89.537	Cynoglossus_semilaevis
ENSCVAG00000007907	farsa	100	87.525	ENSDARG00000098825	farsa	100	87.525	Danio_rerio
ENSCVAG00000007907	farsa	96	75.630	ENSDNOG00000032350	FARSA	98	75.630	Dasypus_novemcinctus
ENSCVAG00000007907	farsa	99	74.798	ENSDORG00000010118	Farsa	98	74.798	Dipodomys_ordii
ENSCVAG00000007907	farsa	99	65.789	FBgn0030007	alpha-PheRS	99	65.789	Drosophila_melanogaster
ENSCVAG00000007907	farsa	100	68.008	ENSETEG00000018673	FARSA	98	68.008	Echinops_telfairi
ENSCVAG00000007907	farsa	63	67.230	ENSEBUG00000008545	farsa	99	67.230	Eptatretus_burgeri
ENSCVAG00000007907	farsa	93	94.872	ENSEASG00005004093	FARSA	81	94.872	Equus_asinus_asinus
ENSCVAG00000007907	farsa	81	94.872	ENSECAG00000015139	FARSA	93	75.252	Equus_caballus
ENSCVAG00000007907	farsa	100	86.922	ENSELUG00000010183	farsa	100	86.922	Esox_lucius
ENSCVAG00000007907	farsa	100	75.252	ENSFCAG00000023511	FARSA	98	75.252	Felis_catus
ENSCVAG00000007907	farsa	99	74.194	ENSFDAG00000005987	FARSA	98	74.194	Fukomys_damarensis
ENSCVAG00000007907	farsa	100	93.159	ENSFHEG00000009382	farsa	94	93.159	Fundulus_heteroclitus
ENSCVAG00000007907	farsa	100	84.739	ENSGMOG00000018319	farsa	100	84.739	Gadus_morhua
ENSCVAG00000007907	farsa	99	72.177	ENSGALG00000040258	FARSA	87	72.177	Gallus_gallus
ENSCVAG00000007907	farsa	100	93.964	ENSGAFG00000014146	farsa	100	93.964	Gambusia_affinis
ENSCVAG00000007907	farsa	100	88.353	ENSGACG00000006278	farsa	100	88.353	Gasterosteus_aculeatus
ENSCVAG00000007907	farsa	100	78.600	ENSGAGG00000000753	FARSA	99	78.600	Gopherus_agassizii
ENSCVAG00000007907	farsa	100	75.855	ENSGGOG00000003418	FARSA	98	75.855	Gorilla_gorilla
ENSCVAG00000007907	farsa	100	91.549	ENSHBUG00000019852	farsa	100	91.549	Haplochromis_burtoni
ENSCVAG00000007907	farsa	99	73.992	ENSHGLG00000005213	FARSA	98	73.992	Heterocephalus_glaber_female
ENSCVAG00000007907	farsa	99	74.194	ENSHGLG00100009586	FARSA	98	74.194	Heterocephalus_glaber_male
ENSCVAG00000007907	farsa	100	89.537	ENSHCOG00000019548	farsa	100	89.537	Hippocampus_comes
ENSCVAG00000007907	farsa	100	87.123	ENSIPUG00000007635	farsa	100	87.123	Ictalurus_punctatus
ENSCVAG00000007907	farsa	100	74.648	ENSSTOG00000008748	FARSA	98	74.648	Ictidomys_tridecemlineatus
ENSCVAG00000007907	farsa	100	89.537	ENSKMAG00000010698	farsa	100	89.537	Kryptolebias_marmoratus
ENSCVAG00000007907	farsa	100	90.141	ENSLBEG00000006757	-	100	90.141	Labrus_bergylta
ENSCVAG00000007907	farsa	86	88.941	ENSLBEG00000001258	farsa	97	88.941	Labrus_bergylta
ENSCVAG00000007907	farsa	93	83.153	ENSLOCG00000008389	farsa	96	83.153	Lepisosteus_oculatus
ENSCVAG00000007907	farsa	100	75.252	ENSLAFG00000016154	FARSA	98	75.252	Loxodonta_africana
ENSCVAG00000007907	farsa	100	75.453	ENSMFAG00000030595	FARSA	98	75.453	Macaca_fascicularis
ENSCVAG00000007907	farsa	100	75.453	ENSMMUG00000004390	FARSA	98	75.453	Macaca_mulatta
ENSCVAG00000007907	farsa	100	75.453	ENSMNEG00000043866	FARSA	98	75.453	Macaca_nemestrina
ENSCVAG00000007907	farsa	100	75.301	ENSMLEG00000029157	FARSA	98	75.301	Mandrillus_leucophaeus
ENSCVAG00000007907	farsa	100	88.732	ENSMAMG00000010636	farsa	100	88.732	Mastacembelus_armatus
ENSCVAG00000007907	farsa	100	91.348	ENSMZEG00005002319	farsa	100	91.348	Maylandia_zebra
ENSCVAG00000007907	farsa	100	76.056	ENSMAUG00000009188	Farsa	98	76.056	Mesocricetus_auratus
ENSCVAG00000007907	farsa	100	75.050	ENSMICG00000016272	FARSA	98	75.050	Microcebus_murinus
ENSCVAG00000007907	farsa	99	75.806	ENSMOCG00000011399	Farsa	98	75.806	Microtus_ochrogaster
ENSCVAG00000007907	farsa	100	86.922	ENSMMOG00000006287	farsa	100	86.922	Mola_mola
ENSCVAG00000007907	farsa	99	75.605	ENSMODG00000011519	FARSA	100	75.605	Monodelphis_domestica
ENSCVAG00000007907	farsa	100	85.111	ENSMALG00000001972	farsa	100	85.111	Monopterus_albus
ENSCVAG00000007907	farsa	99	75.806	MGP_CAROLIEiJ_G0031312	Farsa	98	75.806	Mus_caroli
ENSCVAG00000007907	farsa	99	76.008	ENSMUSG00000003808	Farsa	98	76.008	Mus_musculus
ENSCVAG00000007907	farsa	99	75.403	MGP_PahariEiJ_G0022917	Farsa	98	75.403	Mus_pahari
ENSCVAG00000007907	farsa	99	76.008	MGP_SPRETEiJ_G0032431	Farsa	98	76.008	Mus_spretus
ENSCVAG00000007907	farsa	100	75.855	ENSMPUG00000004400	FARSA	98	75.855	Mustela_putorius_furo
ENSCVAG00000007907	farsa	100	75.453	ENSMLUG00000012767	FARSA	98	75.453	Myotis_lucifugus
ENSCVAG00000007907	farsa	74	75.068	ENSNGAG00000018353	Farsa	100	75.068	Nannospalax_galili
ENSCVAG00000007907	farsa	100	91.147	ENSNBRG00000010063	farsa	100	91.147	Neolamprologus_brichardi
ENSCVAG00000007907	farsa	100	75.453	ENSNLEG00000012899	FARSA	98	75.453	Nomascus_leucogenys
ENSCVAG00000007907	farsa	100	75.453	ENSMEUG00000014253	FARSA	100	75.453	Notamacropus_eugenii
ENSCVAG00000007907	farsa	100	74.245	ENSOPRG00000005004	FARSA	98	74.245	Ochotona_princeps
ENSCVAG00000007907	farsa	99	74.798	ENSODEG00000010433	FARSA	98	74.798	Octodon_degus
ENSCVAG00000007907	farsa	100	91.549	ENSONIG00000008075	farsa	100	91.549	Oreochromis_niloticus
ENSCVAG00000007907	farsa	100	89.537	ENSORLG00000016406	farsa	90	89.537	Oryzias_latipes
ENSCVAG00000007907	farsa	100	89.738	ENSORLG00020021978	farsa	100	89.738	Oryzias_latipes_hni
ENSCVAG00000007907	farsa	100	89.336	ENSORLG00015015045	farsa	100	89.336	Oryzias_latipes_hsok
ENSCVAG00000007907	farsa	100	89.537	ENSOMEG00000017367	farsa	97	89.537	Oryzias_melastigma
ENSCVAG00000007907	farsa	100	75.050	ENSOGAG00000012243	FARSA	98	75.050	Otolemur_garnettii
ENSCVAG00000007907	farsa	100	75.252	ENSOARG00000009991	FARSA	92	75.252	Ovis_aries
ENSCVAG00000007907	farsa	100	75.654	ENSPPAG00000034266	FARSA	98	75.654	Pan_paniscus
ENSCVAG00000007907	farsa	100	75.252	ENSPPRG00000000346	FARSA	98	75.252	Panthera_pardus
ENSCVAG00000007907	farsa	92	76.906	ENSPTIG00000011502	FARSA	94	76.906	Panthera_tigris_altaica
ENSCVAG00000007907	farsa	100	75.654	ENSPTRG00000010550	FARSA	98	75.654	Pan_troglodytes
ENSCVAG00000007907	farsa	100	75.252	ENSPANG00000010978	FARSA	98	71.630	Papio_anubis
ENSCVAG00000007907	farsa	100	86.117	ENSPKIG00000007170	farsa	100	86.117	Paramormyrops_kingsleyae
ENSCVAG00000007907	farsa	90	73.846	ENSPSIG00000012701	FARSA	97	75.223	Pelodiscus_sinensis
ENSCVAG00000007907	farsa	100	88.110	ENSPMGG00000001401	farsa	100	88.110	Periophthalmus_magnuspinnatus
ENSCVAG00000007907	farsa	100	75.654	ENSPEMG00000012560	Farsa	98	75.654	Peromyscus_maniculatus_bairdii
ENSCVAG00000007907	farsa	100	77.465	ENSPMAG00000008453	farsa	100	77.465	Petromyzon_marinus
ENSCVAG00000007907	farsa	100	75.855	ENSPCIG00000019294	FARSA	100	75.855	Phascolarctos_cinereus
ENSCVAG00000007907	farsa	100	93.561	ENSPFOG00000001201	farsa	100	93.561	Poecilia_formosa
ENSCVAG00000007907	farsa	100	93.561	ENSPLAG00000018191	farsa	100	93.561	Poecilia_latipinna
ENSCVAG00000007907	farsa	100	93.763	ENSPMEG00000013547	farsa	100	93.763	Poecilia_mexicana
ENSCVAG00000007907	farsa	100	92.781	ENSPREG00000013620	farsa	100	92.781	Poecilia_reticulata
ENSCVAG00000007907	farsa	100	75.453	ENSPPYG00000009615	FARSA	98	75.453	Pongo_abelii
ENSCVAG00000007907	farsa	100	74.849	ENSPCAG00000015721	FARSA	98	74.849	Procavia_capensis
ENSCVAG00000007907	farsa	100	75.050	ENSPCOG00000014412	FARSA	98	75.050	Propithecus_coquereli
ENSCVAG00000007907	farsa	85	85.238	ENSPVAG00000014714	FARSA	83	85.238	Pteropus_vampyrus
ENSCVAG00000007907	farsa	100	91.549	ENSPNYG00000002144	farsa	100	91.549	Pundamilia_nyererei
ENSCVAG00000007907	farsa	100	86.519	ENSPNAG00000000869	farsa	100	86.519	Pygocentrus_nattereri
ENSCVAG00000007907	farsa	99	75.806	ENSRNOG00000003149	Farsa	98	75.806	Rattus_norvegicus
ENSCVAG00000007907	farsa	100	75.654	ENSRBIG00000025585	FARSA	98	75.654	Rhinopithecus_bieti
ENSCVAG00000007907	farsa	100	75.654	ENSRROG00000040046	FARSA	98	72.032	Rhinopithecus_roxellana
ENSCVAG00000007907	farsa	98	49.899	YFL022C	FRS2	98	49.899	Saccharomyces_cerevisiae
ENSCVAG00000007907	farsa	100	75.252	ENSSBOG00000031362	FARSA	98	75.252	Saimiri_boliviensis_boliviensis
ENSCVAG00000007907	farsa	90	76.063	ENSSHAG00000015006	FARSA	100	76.063	Sarcophilus_harrisii
ENSCVAG00000007907	farsa	100	82.897	ENSSFOG00015014864	farsa	100	82.897	Scleropages_formosus
ENSCVAG00000007907	farsa	100	89.738	ENSSMAG00000002358	farsa	100	89.738	Scophthalmus_maximus
ENSCVAG00000007907	farsa	100	90.141	ENSSDUG00000008631	farsa	100	90.141	Seriola_dumerili
ENSCVAG00000007907	farsa	100	89.537	ENSSLDG00000017108	farsa	100	89.537	Seriola_lalandi_dorsalis
ENSCVAG00000007907	farsa	71	97.059	ENSSARG00000006579	-	68	97.059	Sorex_araneus
ENSCVAG00000007907	farsa	90	68.610	ENSSPUG00000012509	FARSA	98	68.053	Sphenodon_punctatus
ENSCVAG00000007907	farsa	100	91.348	ENSSPAG00000018292	farsa	92	91.348	Stegastes_partitus
ENSCVAG00000007907	farsa	100	75.453	ENSSSCG00000013745	FARSA	98	75.453	Sus_scrofa
ENSCVAG00000007907	farsa	100	76.459	ENSTRUG00000010624	farsa	100	76.459	Takifugu_rubripes
ENSCVAG00000007907	farsa	100	81.087	ENSTNIG00000008330	farsa	100	81.087	Tetraodon_nigroviridis
ENSCVAG00000007907	farsa	90	72.768	ENSTBEG00000000396	FARSA	98	72.768	Tupaia_belangeri
ENSCVAG00000007907	farsa	92	94.118	ENSTTRG00000003599	FARSA	85	94.118	Tursiops_truncatus
ENSCVAG00000007907	farsa	100	75.453	ENSUAMG00000010230	FARSA	98	75.453	Ursus_americanus
ENSCVAG00000007907	farsa	100	75.453	ENSUMAG00000006110	FARSA	98	75.453	Ursus_maritimus
ENSCVAG00000007907	farsa	100	75.855	ENSVVUG00000024145	FARSA	98	75.855	Vulpes_vulpes
ENSCVAG00000007907	farsa	100	79.000	ENSXETG00000007936	farsa	100	79.000	Xenopus_tropicalis
ENSCVAG00000007907	farsa	100	84.739	ENSXCOG00000015512	farsa	100	84.739	Xiphophorus_couchianus
ENSCVAG00000007907	farsa	100	92.958	ENSXMAG00000008832	farsa	100	92.958	Xiphophorus_maculatus