EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000007942 (Gene tree)
Gene ID: 107098319
Gene Symbol: THUMPD2
Alias: C2orf8|MGC2454
Full Name: THUMP domain containing 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 6238 bases
Position: chrKL653268.1:355220-361457
Accession: 107098319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000024099	THUMP	PF02926.17	1.9e-05	1	1
ENSCVAP00000024099	MTS	PF05175.14	2.6e-06	1	1
ENSCVAP00000024099	UPF0020	PF01170.18	1e-24	1	1
ENSCVAP00000024099	Methyltransf_31	PF13847.6	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000005040	THUMPD2-201	1739	XM_015395942	ENSCVAP00000024099	437 (aa)	XP_015251428	UPI000742B369

Gene Model

Click here to download ENSCVAG00000007942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007942's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007942	THUMPD2	50	30.342	ENSG00000134077	THUMPD3	60	32.624	Homo_sapiens
ENSCVAG00000007942	THUMPD2	80	40.374	ENSG00000138050	THUMPD2	74	39.037	Homo_sapiens
ENSCVAG00000007942	THUMPD2	99	53.678	ENSAPOG00000001802	-	88	54.274	Acanthochromis_polyacanthus
ENSCVAG00000007942	THUMPD2	52	63.436	ENSACIG00000011677	THUMPD2	51	63.436	Amphilophus_citrinellus
ENSCVAG00000007942	THUMPD2	99	54.183	ENSAOCG00000000927	THUMPD2	86	53.386	Amphiprion_ocellaris
ENSCVAG00000007942	THUMPD2	99	53.984	ENSAPEG00000000981	thumpd2	86	54.183	Amphiprion_percula
ENSCVAG00000007942	THUMPD2	90	66.667	ENSATEG00000012329	thumpd2	66	64.798	Anabas_testudineus
ENSCVAG00000007942	THUMPD2	97	38.128	ENSAPLG00000008775	THUMPD2	68	41.076	Anas_platyrhynchos
ENSCVAG00000007942	THUMPD2	78	42.246	ENSACAG00000000538	THUMPD2	64	45.833	Anolis_carolinensis
ENSCVAG00000007942	THUMPD2	65	47.811	ENSANAG00000034298	THUMPD2	58	46.128	Aotus_nancymaae
ENSCVAG00000007942	THUMPD2	98	53.982	ENSACLG00000025840	thumpd2	76	84.946	Astatotilapia_calliptera
ENSCVAG00000007942	THUMPD2	71	41.987	ENSAMXG00000011080	thumpd2	71	42.405	Astyanax_mexicanus
ENSCVAG00000007942	THUMPD2	84	41.470	ENSBTAG00000004722	THUMPD2	74	40.157	Bos_taurus
ENSCVAG00000007942	THUMPD2	65	48.161	ENSCJAG00000014891	THUMPD2	58	46.823	Callithrix_jacchus
ENSCVAG00000007942	THUMPD2	65	47.826	ENSCAFG00000006471	THUMPD2	59	45.638	Canis_familiaris
ENSCVAG00000007942	THUMPD2	65	47.826	ENSCAFG00020021695	THUMPD2	62	46.309	Canis_lupus_dingo
ENSCVAG00000007942	THUMPD2	84	41.860	ENSCHIG00000013921	THUMPD2	74	40.310	Capra_hircus
ENSCVAG00000007942	THUMPD2	81	42.216	ENSTSYG00000010555	THUMPD2	69	48.601	Carlito_syrichta
ENSCVAG00000007942	THUMPD2	96	38.667	ENSCPOG00000003368	THUMPD2	62	42.254	Cavia_porcellus
ENSCVAG00000007942	THUMPD2	80	41.799	ENSCCAG00000034405	THUMPD2	74	40.741	Cebus_capucinus
ENSCVAG00000007942	THUMPD2	65	46.644	ENSCATG00000012396	THUMPD2	72	45.302	Cercocebus_atys
ENSCVAG00000007942	THUMPD2	95	37.558	ENSCLAG00000003029	THUMPD2	62	41.860	Chinchilla_lanigera
ENSCVAG00000007942	THUMPD2	65	46.644	ENSCSAG00000012431	THUMPD2	72	45.302	Chlorocebus_sabaeus
ENSCVAG00000007942	THUMPD2	96	38.462	ENSCPBG00000018272	THUMPD2	62	42.330	Chrysemys_picta_bellii
ENSCVAG00000007942	THUMPD2	80	40.741	ENSCANG00000032596	THUMPD2	74	39.683	Colobus_angolensis_palliatus
ENSCVAG00000007942	THUMPD2	65	49.648	ENSDARG00000093070	thumpd2	83	39.907	Danio_rerio
ENSCVAG00000007942	THUMPD2	65	44.966	ENSDNOG00000019834	THUMPD2	58	44.966	Dasypus_novemcinctus
ENSCVAG00000007942	THUMPD2	85	33.756	ENSETEG00000001300	THUMPD2	52	41.767	Echinops_telfairi
ENSCVAG00000007942	THUMPD2	62	38.652	ENSEBUG00000010906	THUMPD2	85	38.790	Eptatretus_burgeri
ENSCVAG00000007942	THUMPD2	65	45.302	ENSEASG00005005106	THUMPD2	66	38.442	Equus_asinus_asinus
ENSCVAG00000007942	THUMPD2	97	44.009	ENSELUG00000003735	thumpd2	78	44.045	Esox_lucius
ENSCVAG00000007942	THUMPD2	65	49.000	ENSFCAG00000006809	THUMPD2	80	37.813	Felis_catus
ENSCVAG00000007942	THUMPD2	94	39.277	ENSFALG00000008655	THUMPD2	76	39.518	Ficedula_albicollis
ENSCVAG00000007942	THUMPD2	100	71.141	ENSFHEG00000011402	thumpd2	85	70.917	Fundulus_heteroclitus
ENSCVAG00000007942	THUMPD2	56	41.224	ENSGMOG00000002236	-	78	40.000	Gadus_morhua
ENSCVAG00000007942	THUMPD2	85	39.541	ENSGALG00000009119	THUMPD2	93	39.541	Gallus_gallus
ENSCVAG00000007942	THUMPD2	100	70.946	ENSGAFG00000012683	thumpd2	90	71.396	Gambusia_affinis
ENSCVAG00000007942	THUMPD2	80	40.107	ENSGGOG00000001608	THUMPD2	74	38.770	Gorilla_gorilla
ENSCVAG00000007942	THUMPD2	75	63.143	ENSHBUG00000011780	-	98	50.791	Haplochromis_burtoni
ENSCVAG00000007942	THUMPD2	97	37.020	ENSHGLG00000019145	THUMPD2	81	36.343	Heterocephalus_glaber_female
ENSCVAG00000007942	THUMPD2	72	43.949	ENSIPUG00000015283	thumpd2	71	42.994	Ictalurus_punctatus
ENSCVAG00000007942	THUMPD2	99	37.277	ENSSTOG00000027472	THUMPD2	83	37.277	Ictidomys_tridecemlineatus
ENSCVAG00000007942	THUMPD2	80	64.000	ENSLBEG00000007585	THUMPD2	87	48.654	Labrus_bergylta
ENSCVAG00000007942	THUMPD2	65	51.000	ENSLOCG00000015747	THUMPD2	72	52.083	Lepisosteus_oculatus
ENSCVAG00000007942	THUMPD2	65	46.644	ENSMFAG00000031464	THUMPD2	58	45.302	Macaca_fascicularis
ENSCVAG00000007942	THUMPD2	65	46.644	ENSMMUG00000011841	THUMPD2	58	45.302	Macaca_mulatta
ENSCVAG00000007942	THUMPD2	65	46.644	ENSMNEG00000037438	THUMPD2	58	45.302	Macaca_nemestrina
ENSCVAG00000007942	THUMPD2	65	46.644	ENSMLEG00000031490	THUMPD2	64	45.302	Mandrillus_leucophaeus
ENSCVAG00000007942	THUMPD2	74	66.926	ENSMAMG00000022090	thumpd2	68	73.214	Mastacembelus_armatus
ENSCVAG00000007942	THUMPD2	94	62.222	ENSMZEG00005027354	-	86	48.417	Maylandia_zebra
ENSCVAG00000007942	THUMPD2	78	40.556	ENSMGAG00000007605	THUMPD2	75	40.833	Meleagris_gallopavo
ENSCVAG00000007942	THUMPD2	95	35.730	ENSMAUG00000012866	Thumpd2	58	40.000	Mesocricetus_auratus
ENSCVAG00000007942	THUMPD2	97	38.161	ENSMICG00000008042	THUMPD2	81	37.471	Microcebus_murinus
ENSCVAG00000007942	THUMPD2	68	60.502	ENSMMOG00000007356	thumpd2	75	59.875	Mola_mola
ENSCVAG00000007942	THUMPD2	65	47.351	ENSMODG00000009129	THUMPD2	65	44.051	Monodelphis_domestica
ENSCVAG00000007942	THUMPD2	77	61.885	ENSMALG00000020471	thumpd2	81	62.041	Monopterus_albus
ENSCVAG00000007942	THUMPD2	72	43.333	ENSMLUG00000009688	THUMPD2	66	41.420	Myotis_lucifugus
ENSCVAG00000007942	THUMPD2	65	45.973	ENSNLEG00000016562	THUMPD2	58	44.295	Nomascus_leucogenys
ENSCVAG00000007942	THUMPD2	65	45.270	ENSMEUG00000014815	THUMPD2	64	44.932	Notamacropus_eugenii
ENSCVAG00000007942	THUMPD2	59	30.258	ENSOPRG00000002020	THUMPD3	62	30.258	Ochotona_princeps
ENSCVAG00000007942	THUMPD2	97	32.880	ENSOPRG00000013478	THUMPD2	69	36.080	Ochotona_princeps
ENSCVAG00000007942	THUMPD2	87	57.662	ENSONIG00000001165	thumpd2	82	56.997	Oreochromis_niloticus
ENSCVAG00000007942	THUMPD2	67	39.796	ENSOANG00000004028	-	72	39.796	Ornithorhynchus_anatinus
ENSCVAG00000007942	THUMPD2	54	30.830	ENSOCUG00000010921	THUMPD3	52	30.830	Oryctolagus_cuniculus
ENSCVAG00000007942	THUMPD2	80	40.633	ENSOCUG00000003257	THUMPD2	68	46.043	Oryctolagus_cuniculus
ENSCVAG00000007942	THUMPD2	97	55.479	ENSORLG00000002138	thumpd2	83	54.795	Oryzias_latipes
ENSCVAG00000007942	THUMPD2	97	54.318	ENSORLG00020018792	thumpd2	98	53.864	Oryzias_latipes_hni
ENSCVAG00000007942	THUMPD2	99	53.795	ENSORLG00015005237	thumpd2	82	54.110	Oryzias_latipes_hsok
ENSCVAG00000007942	THUMPD2	96	43.936	ENSOMEG00000023563	thumpd2	73	63.043	Oryzias_melastigma
ENSCVAG00000007942	THUMPD2	96	37.296	ENSOGAG00000010890	THUMPD2	87	36.620	Otolemur_garnettii
ENSCVAG00000007942	THUMPD2	84	39.332	ENSOARG00000007841	THUMPD2	75	37.789	Ovis_aries
ENSCVAG00000007942	THUMPD2	80	40.800	ENSPPAG00000033850	THUMPD2	75	39.467	Pan_paniscus
ENSCVAG00000007942	THUMPD2	65	47.811	ENSPPRG00000003874	THUMPD2	80	36.468	Panthera_pardus
ENSCVAG00000007942	THUMPD2	56	30.888	ENSPTIG00000017923	THUMPD3	51	30.888	Panthera_tigris_altaica
ENSCVAG00000007942	THUMPD2	65	47.811	ENSPTIG00000004118	THUMPD2	73	42.090	Panthera_tigris_altaica
ENSCVAG00000007942	THUMPD2	80	40.800	ENSPTRG00000011860	THUMPD2	74	39.467	Pan_troglodytes
ENSCVAG00000007942	THUMPD2	65	46.309	ENSPANG00000004807	THUMPD2	58	44.966	Papio_anubis
ENSCVAG00000007942	THUMPD2	65	50.704	ENSPKIG00000022207	THUMPD2	55	50.352	Paramormyrops_kingsleyae
ENSCVAG00000007942	THUMPD2	97	38.009	ENSPSIG00000003159	THUMPD2	88	38.009	Pelodiscus_sinensis
ENSCVAG00000007942	THUMPD2	79	37.714	ENSPMAG00000006922	thumpd2	84	37.714	Petromyzon_marinus
ENSCVAG00000007942	THUMPD2	76	38.439	ENSPCIG00000022621	THUMPD2	64	37.861	Phascolarctos_cinereus
ENSCVAG00000007942	THUMPD2	100	67.342	ENSPFOG00000006461	thumpd2	84	67.793	Poecilia_formosa
ENSCVAG00000007942	THUMPD2	69	70.418	ENSPLAG00000010700	THUMPD2	69	70.740	Poecilia_latipinna
ENSCVAG00000007942	THUMPD2	81	70.950	ENSPMEG00000009573	-	78	71.229	Poecilia_mexicana
ENSCVAG00000007942	THUMPD2	69	75.081	ENSPREG00000001603	THUMPD2	74	76.699	Poecilia_reticulata
ENSCVAG00000007942	THUMPD2	65	45.151	ENSPPYG00000012470	THUMPD2	72	44.631	Pongo_abelii
ENSCVAG00000007942	THUMPD2	50	31.466	ENSPCAG00000015398	THUMPD3	55	31.466	Procavia_capensis
ENSCVAG00000007942	THUMPD2	96	33.641	ENSPCOG00000028456	-	81	33.180	Propithecus_coquereli
ENSCVAG00000007942	THUMPD2	96	38.532	ENSPCOG00000000396	-	80	38.194	Propithecus_coquereli
ENSCVAG00000007942	THUMPD2	68	67.094	ENSPNYG00000009804	THUMPD2	76	65.517	Pundamilia_nyererei
ENSCVAG00000007942	THUMPD2	98	41.244	ENSPNAG00000023224	thumpd2	82	41.324	Pygocentrus_nattereri
ENSCVAG00000007942	THUMPD2	65	46.980	ENSRBIG00000034978	THUMPD2	64	45.638	Rhinopithecus_bieti
ENSCVAG00000007942	THUMPD2	80	40.909	ENSRROG00000031707	THUMPD2	78	39.840	Rhinopithecus_roxellana
ENSCVAG00000007942	THUMPD2	65	48.173	ENSSBOG00000015419	THUMPD2	58	46.844	Saimiri_boliviensis_boliviensis
ENSCVAG00000007942	THUMPD2	65	46.488	ENSSHAG00000010785	THUMPD2	63	46.154	Sarcophilus_harrisii
ENSCVAG00000007942	THUMPD2	55	53.112	ENSSFOG00015006959	THUMPD2	71	53.112	Scleropages_formosus
ENSCVAG00000007942	THUMPD2	63	62.500	ENSSMAG00000019604	-	51	62.500	Scophthalmus_maximus
ENSCVAG00000007942	THUMPD2	99	50.476	ENSSDUG00000019898	THUMPD2	87	48.411	Seriola_dumerili
ENSCVAG00000007942	THUMPD2	99	50.476	ENSSLDG00000016788	-	87	50.286	Seriola_lalandi_dorsalis
ENSCVAG00000007942	THUMPD2	65	45.000	ENSSPUG00000006316	THUMPD2	94	36.977	Sphenodon_punctatus
ENSCVAG00000007942	THUMPD2	65	46.512	ENSSSCG00000008470	THUMPD2	74	41.161	Sus_scrofa
ENSCVAG00000007942	THUMPD2	80	42.407	ENSTGUG00000012782	THUMPD2	83	42.407	Taeniopygia_guttata
ENSCVAG00000007942	THUMPD2	99	51.299	ENSTRUG00000022712	THUMPD2	85	50.216	Takifugu_rubripes
ENSCVAG00000007942	THUMPD2	56	46.748	ENSTNIG00000009817	-	80	46.748	Tetraodon_nigroviridis
ENSCVAG00000007942	THUMPD2	60	35.612	ENSTBEG00000008269	-	58	33.574	Tupaia_belangeri
ENSCVAG00000007942	THUMPD2	65	48.495	ENSTTRG00000005603	THUMPD2	62	46.980	Tursiops_truncatus
ENSCVAG00000007942	THUMPD2	96	37.946	ENSUAMG00000011048	THUMPD2	61	41.011	Ursus_americanus
ENSCVAG00000007942	THUMPD2	96	36.830	ENSUMAG00000013316	THUMPD2	70	39.286	Ursus_maritimus
ENSCVAG00000007942	THUMPD2	66	42.857	ENSVPAG00000007570	THUMPD2	65	42.857	Vicugna_pacos
ENSCVAG00000007942	THUMPD2	65	47.826	ENSVVUG00000018628	THUMPD2	62	44.586	Vulpes_vulpes
ENSCVAG00000007942	THUMPD2	96	37.176	ENSXETG00000018494	thumpd2	82	37.176	Xenopus_tropicalis
ENSCVAG00000007942	THUMPD2	75	77.289	ENSXCOG00000013456	-	80	78.755	Xiphophorus_couchianus
ENSCVAG00000007942	THUMPD2	100	71.171	ENSXMAG00000017249	thumpd2	85	72.297	Xiphophorus_maculatus