EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000007986 (Gene tree)
Gene ID: 107088828
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 21947 bases
Position: chrKL652729.1:832504-854450
Accession: 107088828
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000024122	Fox-1_C	PF12414.8	2.3e-34	1	1
ENSCVAP00000024122	RRM_1	PF00076.22	7.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000004984	-	3182	XM_015381252	ENSCVAP00000024122	381 (aa)	XP_015236738	UPI0007428C6D

Gene Model

Click here to download ENSCVAG00000007986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000007986's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000007986	rbfox1l	54	61.062	ENSCVAG00000004491	rbfox2	100	61.333
ENSCVAG00000007986	rbfox1l	63	54.231	ENSCVAG00000016503	-	82	50.000
ENSCVAG00000007986	rbfox1l	85	59.146	ENSCVAG00000006882	rbfox3b	78	61.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000007986	rbfox1l	97	89.973	ENSAPOG00000016304	rbfox1l	98	89.973	Acanthochromis_polyacanthus
ENSCVAG00000007986	rbfox1l	100	81.723	ENSACIG00000006441	rbfox1l	100	82.245	Amphilophus_citrinellus
ENSCVAG00000007986	rbfox1l	88	85.970	ENSAOCG00000020938	rbfox1l	99	85.970	Amphiprion_ocellaris
ENSCVAG00000007986	rbfox1l	100	90.551	ENSAPEG00000008232	rbfox1l	100	90.551	Amphiprion_percula
ENSCVAG00000007986	rbfox1l	100	85.117	ENSATEG00000022649	rbfox1l	100	85.640	Anabas_testudineus
ENSCVAG00000007986	rbfox1l	69	69.630	ENSACAG00000011931	-	97	70.000	Anolis_carolinensis
ENSCVAG00000007986	rbfox1l	100	86.945	ENSACLG00000021394	rbfox1l	100	87.990	Astatotilapia_calliptera
ENSCVAG00000007986	rbfox1l	100	83.938	ENSAMXG00000010470	rbfox1l	100	83.938	Astyanax_mexicanus
ENSCVAG00000007986	rbfox1l	100	55.499	ENSCPBG00000010944	-	100	58.779	Chrysemys_picta_bellii
ENSCVAG00000007986	rbfox1l	100	86.198	ENSCSEG00000018898	rbfox1l	100	85.938	Cynoglossus_semilaevis
ENSCVAG00000007986	rbfox1l	100	81.606	ENSDARG00000021184	rbfox1l	100	82.902	Danio_rerio
ENSCVAG00000007986	rbfox1l	100	79.644	ENSELUG00000015077	rbfox1l	100	82.443	Esox_lucius
ENSCVAG00000007986	rbfox1l	79	97.561	ENSFHEG00000016557	rbfox1l	95	97.561	Fundulus_heteroclitus
ENSCVAG00000007986	rbfox1l	100	81.201	ENSGMOG00000005040	rbfox1l	100	81.462	Gadus_morhua
ENSCVAG00000007986	rbfox1l	92	93.220	ENSGAFG00000013211	rbfox1l	97	93.220	Gambusia_affinis
ENSCVAG00000007986	rbfox1l	100	87.206	ENSGACG00000010757	rbfox1l	100	87.467	Gasterosteus_aculeatus
ENSCVAG00000007986	rbfox1l	65	69.565	ENSGAGG00000012440	-	87	72.047	Gopherus_agassizii
ENSCVAG00000007986	rbfox1l	100	86.945	ENSHBUG00000013406	rbfox1l	100	87.990	Haplochromis_burtoni
ENSCVAG00000007986	rbfox1l	100	83.073	ENSHCOG00000020771	rbfox1l	100	84.896	Hippocampus_comes
ENSCVAG00000007986	rbfox1l	99	78.215	ENSIPUG00000000065	rbfox1l	99	81.232	Ictalurus_punctatus
ENSCVAG00000007986	rbfox1l	100	88.052	ENSKMAG00000005146	rbfox1l	100	89.091	Kryptolebias_marmoratus
ENSCVAG00000007986	rbfox1l	100	90.339	ENSLBEG00000017089	rbfox1l	100	90.601	Labrus_bergylta
ENSCVAG00000007986	rbfox1l	100	89.034	ENSMAMG00000019480	rbfox1l	100	89.556	Mastacembelus_armatus
ENSCVAG00000007986	rbfox1l	100	86.945	ENSMZEG00005016374	rbfox1l	100	87.990	Maylandia_zebra
ENSCVAG00000007986	rbfox1l	100	87.467	ENSMMOG00000016530	rbfox1l	100	87.990	Mola_mola
ENSCVAG00000007986	rbfox1l	100	84.073	ENSMALG00000009384	rbfox1l	100	84.334	Monopterus_albus
ENSCVAG00000007986	rbfox1l	100	87.206	ENSNBRG00000003346	rbfox1l	100	87.728	Neolamprologus_brichardi
ENSCVAG00000007986	rbfox1l	100	87.467	ENSONIG00000012754	rbfox1l	100	88.512	Oreochromis_niloticus
ENSCVAG00000007986	rbfox1l	100	90.289	ENSORLG00000011269	rbfox1l	100	90.289	Oryzias_latipes
ENSCVAG00000007986	rbfox1l	100	90.551	ENSORLG00020000162	rbfox1l	100	90.551	Oryzias_latipes_hni
ENSCVAG00000007986	rbfox1l	100	90.551	ENSORLG00015013464	rbfox1l	100	90.551	Oryzias_latipes_hsok
ENSCVAG00000007986	rbfox1l	100	90.289	ENSOMEG00000010584	rbfox1l	100	90.289	Oryzias_melastigma
ENSCVAG00000007986	rbfox1l	100	84.635	ENSPKIG00000012029	rbfox1l	100	85.156	Paramormyrops_kingsleyae
ENSCVAG00000007986	rbfox1l	100	81.937	ENSPMGG00000012082	rbfox1l	100	81.201	Periophthalmus_magnuspinnatus
ENSCVAG00000007986	rbfox1l	100	93.211	ENSPFOG00000009338	rbfox1l	100	93.211	Poecilia_formosa
ENSCVAG00000007986	rbfox1l	85	83.792	ENSPLAG00000012816	rbfox1l	99	83.792	Poecilia_latipinna
ENSCVAG00000007986	rbfox1l	100	89.295	ENSPMEG00000017597	rbfox1l	100	89.295	Poecilia_mexicana
ENSCVAG00000007986	rbfox1l	100	90.078	ENSPREG00000007940	rbfox1l	100	90.078	Poecilia_reticulata
ENSCVAG00000007986	rbfox1l	100	86.945	ENSPNYG00000002098	rbfox1l	100	87.990	Pundamilia_nyererei
ENSCVAG00000007986	rbfox1l	100	81.137	ENSPNAG00000001620	rbfox1l	100	83.204	Pygocentrus_nattereri
ENSCVAG00000007986	rbfox1l	100	80.260	ENSSFOG00015000675	rbfox1l	100	82.078	Scleropages_formosus
ENSCVAG00000007986	rbfox1l	100	87.206	ENSSMAG00000013090	rbfox1l	100	87.467	Scophthalmus_maximus
ENSCVAG00000007986	rbfox1l	100	84.833	ENSSDUG00000008705	rbfox1l	100	85.604	Seriola_dumerili
ENSCVAG00000007986	rbfox1l	100	86.082	ENSSLDG00000022256	rbfox1l	100	86.082	Seriola_lalandi_dorsalis
ENSCVAG00000007986	rbfox1l	100	90.551	ENSSPAG00000016620	rbfox1l	100	90.551	Stegastes_partitus
ENSCVAG00000007986	rbfox1l	96	82.432	ENSTRUG00000015905	rbfox1l	100	82.973	Takifugu_rubripes
ENSCVAG00000007986	rbfox1l	65	80.297	ENSTNIG00000008088	rbfox1l	100	82.900	Tetraodon_nigroviridis
ENSCVAG00000007986	rbfox1l	100	93.734	ENSXMAG00000023471	rbfox1l	100	93.734	Xiphophorus_maculatus