EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000008168 (Gene tree)
Gene ID: 107088813
Gene Symbol: cnot3a
Alias: fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name: CCR4-NOT transcription complex subunit 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 11976 bases
Position: chrKL652729.1:750239-762214
Accession: 107088813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000006595	Not3	PF04065.15	1.9e-96	1	1
ENSCVAP00000006599	Not3	PF04065.15	1.9e-96	1	1
ENSCVAP00000006595	NOT2_3_5	PF04153.18	3.7e-38	1	1
ENSCVAP00000006599	NOT2_3_5	PF04153.18	3.8e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000004709	-	4837	XM_015381221	ENSCVAP00000006599	901 (aa)	XP_015236707	UPI000742B4FE
ENSCVAT00000004721	-	4780	XM_015381222	ENSCVAP00000006595	882 (aa)	XP_015236708	UPI00074261A0

Gene Model

Click here to download ENSCVAG00000008168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000008168's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000008168	cnot3a	69	88.103	ENSG00000088038	CNOT3	100	94.845	Homo_sapiens
ENSCVAG00000008168	cnot3a	59	88.256	ENSAPOG00000015499	CNOT3	92	88.256	Acanthochromis_polyacanthus
ENSCVAG00000008168	cnot3a	58	85.813	ENSAPOG00000015002	cnot3b	76	88.448	Acanthochromis_polyacanthus
ENSCVAG00000008168	cnot3a	69	88.424	ENSAMEG00000004528	CNOT3	91	89.836	Ailuropoda_melanoleuca
ENSCVAG00000008168	cnot3a	62	91.964	ENSACIG00000003652	cnot3b	98	91.964	Amphilophus_citrinellus
ENSCVAG00000008168	cnot3a	100	84.026	ENSACIG00000006635	cnot3a	100	98.718	Amphilophus_citrinellus
ENSCVAG00000008168	cnot3a	97	57.946	ENSAOCG00000018385	-	96	77.990	Amphiprion_ocellaris
ENSCVAG00000008168	cnot3a	99	81.980	ENSAOCG00000023769	cnot3a	99	84.667	Amphiprion_ocellaris
ENSCVAG00000008168	cnot3a	100	84.123	ENSAPEG00000006624	cnot3a	100	86.674	Amphiprion_percula
ENSCVAG00000008168	cnot3a	97	62.637	ENSAPEG00000002640	cnot3b	78	88.889	Amphiprion_percula
ENSCVAG00000008168	cnot3a	100	84.539	ENSATEG00000022737	cnot3a	100	85.746	Anabas_testudineus
ENSCVAG00000008168	cnot3a	65	88.746	ENSACAG00000016085	CNOT3	95	89.836	Anolis_carolinensis
ENSCVAG00000008168	cnot3a	69	88.103	ENSANAG00000025756	CNOT3	91	89.508	Aotus_nancymaae
ENSCVAG00000008168	cnot3a	100	65.328	ENSACLG00000016702	cnot3b	100	63.957	Astatotilapia_calliptera
ENSCVAG00000008168	cnot3a	100	87.596	ENSACLG00000021136	cnot3a	100	87.706	Astatotilapia_calliptera
ENSCVAG00000008168	cnot3a	100	65.717	ENSAMXG00000009447	cnot3b	70	89.730	Astyanax_mexicanus
ENSCVAG00000008168	cnot3a	100	71.199	ENSAMXG00000012359	cnot3a	100	72.629	Astyanax_mexicanus
ENSCVAG00000008168	cnot3a	69	88.424	ENSBTAG00000014900	CNOT3	91	89.508	Bos_taurus
ENSCVAG00000008168	cnot3a	69	88.103	ENSCJAG00000001094	CNOT3	91	89.508	Callithrix_jacchus
ENSCVAG00000008168	cnot3a	64	90.157	ENSCAFG00000002699	CNOT3	91	89.508	Canis_familiaris
ENSCVAG00000008168	cnot3a	64	90.157	ENSCAFG00020018359	CNOT3	91	89.508	Canis_lupus_dingo
ENSCVAG00000008168	cnot3a	64	86.452	ENSCHIG00000015302	CNOT3	91	87.500	Capra_hircus
ENSCVAG00000008168	cnot3a	69	88.103	ENSTSYG00000008058	CNOT3	91	89.508	Carlito_syrichta
ENSCVAG00000008168	cnot3a	74	79.063	ENSCAPG00000009533	CNOT3	91	89.508	Cavia_aperea
ENSCVAG00000008168	cnot3a	82	74.937	ENSCPOG00000020741	CNOT3	91	89.508	Cavia_porcellus
ENSCVAG00000008168	cnot3a	69	88.103	ENSCCAG00000036290	CNOT3	91	89.508	Cebus_capucinus
ENSCVAG00000008168	cnot3a	74	88.103	ENSCATG00000030324	CNOT3	91	89.508	Cercocebus_atys
ENSCVAG00000008168	cnot3a	75	88.424	ENSCLAG00000003302	CNOT3	100	85.366	Chinchilla_lanigera
ENSCVAG00000008168	cnot3a	74	88.103	ENSCSAG00000001900	CNOT3	91	89.508	Chlorocebus_sabaeus
ENSCVAG00000008168	cnot3a	70	88.103	ENSCPBG00000011655	CNOT3	89	89.508	Chrysemys_picta_bellii
ENSCVAG00000008168	cnot3a	67	69.008	ENSCING00000000293	-	71	69.008	Ciona_intestinalis
ENSCVAG00000008168	cnot3a	74	88.103	ENSCANG00000013408	CNOT3	91	89.508	Colobus_angolensis_palliatus
ENSCVAG00000008168	cnot3a	75	88.424	ENSCGRG00001000855	Cnot3	91	89.836	Cricetulus_griseus_chok1gshd
ENSCVAG00000008168	cnot3a	100	83.676	ENSCSEG00000003574	cnot3a	100	84.649	Cynoglossus_semilaevis
ENSCVAG00000008168	cnot3a	100	58.460	ENSCSEG00000016892	cnot3b	89	80.065	Cynoglossus_semilaevis
ENSCVAG00000008168	cnot3a	100	72.391	ENSDARG00000007135	cnot3a	100	72.283	Danio_rerio
ENSCVAG00000008168	cnot3a	74	87.781	ENSDNOG00000045972	CNOT3	91	89.180	Dasypus_novemcinctus
ENSCVAG00000008168	cnot3a	69	88.103	ENSDORG00000008021	Cnot3	91	89.508	Dipodomys_ordii
ENSCVAG00000008168	cnot3a	50	67.251	FBgn0033029	Not3	50	67.460	Drosophila_melanogaster
ENSCVAG00000008168	cnot3a	53	100.000	ENSETEG00000006305	CNOT3	63	100.000	Echinops_telfairi
ENSCVAG00000008168	cnot3a	63	76.378	ENSEBUG00000010437	cnot3a	65	75.984	Eptatretus_burgeri
ENSCVAG00000008168	cnot3a	69	88.103	ENSEASG00005021591	CNOT3	91	89.508	Equus_asinus_asinus
ENSCVAG00000008168	cnot3a	69	88.103	ENSECAG00000023181	CNOT3	91	89.508	Equus_caballus
ENSCVAG00000008168	cnot3a	100	77.219	ENSELUG00000014743	cnot3a	100	77.968	Esox_lucius
ENSCVAG00000008168	cnot3a	100	65.720	ENSELUG00000000953	cnot3b	100	64.873	Esox_lucius
ENSCVAG00000008168	cnot3a	77	75.063	ENSFCAG00000014042	CNOT3	91	89.508	Felis_catus
ENSCVAG00000008168	cnot3a	100	89.911	ENSFHEG00000023166	cnot3a	96	99.145	Fundulus_heteroclitus
ENSCVAG00000008168	cnot3a	94	76.362	ENSGMOG00000005365	cnot3a	98	74.130	Gadus_morhua
ENSCVAG00000008168	cnot3a	100	92.810	ENSGAFG00000013094	cnot3a	100	92.810	Gambusia_affinis
ENSCVAG00000008168	cnot3a	94	76.690	ENSGACG00000011489	cnot3a	98	77.506	Gasterosteus_aculeatus
ENSCVAG00000008168	cnot3a	67	88.235	ENSGAGG00000012677	CNOT3	95	86.697	Gopherus_agassizii
ENSCVAG00000008168	cnot3a	69	88.103	ENSGGOG00000012996	CNOT3	91	89.508	Gorilla_gorilla
ENSCVAG00000008168	cnot3a	100	87.596	ENSHBUG00000005275	cnot3a	100	87.706	Haplochromis_burtoni
ENSCVAG00000008168	cnot3a	69	88.424	ENSHGLG00000008821	CNOT3	92	89.508	Heterocephalus_glaber_female
ENSCVAG00000008168	cnot3a	62	84.291	ENSHGLG00100006181	CNOT3	100	80.460	Heterocephalus_glaber_male
ENSCVAG00000008168	cnot3a	100	80.357	ENSHCOG00000020968	cnot3a	100	82.589	Hippocampus_comes
ENSCVAG00000008168	cnot3a	92	95.299	ENSIPUG00000000167	cnot3	100	66.302	Ictalurus_punctatus
ENSCVAG00000008168	cnot3a	74	88.103	ENSSTOG00000028248	CNOT3	91	89.508	Ictidomys_tridecemlineatus
ENSCVAG00000008168	cnot3a	69	88.424	ENSJJAG00000014594	Cnot3	91	89.836	Jaculus_jaculus
ENSCVAG00000008168	cnot3a	100	88.840	ENSKMAG00000004863	cnot3a	100	97.006	Kryptolebias_marmoratus
ENSCVAG00000008168	cnot3a	82	93.213	ENSLBEG00000017296	cnot3a	68	95.699	Labrus_bergylta
ENSCVAG00000008168	cnot3a	96	64.751	ENSLBEG00000018278	cnot3b	99	65.432	Labrus_bergylta
ENSCVAG00000008168	cnot3a	70	84.783	ENSLACG00000009742	CNOT3	91	87.869	Latimeria_chalumnae
ENSCVAG00000008168	cnot3a	55	94.611	ENSLOCG00000000005	cnot3b	79	92.308	Lepisosteus_oculatus
ENSCVAG00000008168	cnot3a	69	87.500	ENSLAFG00000022133	CNOT3	70	88.889	Loxodonta_africana
ENSCVAG00000008168	cnot3a	74	88.103	ENSMFAG00000040073	CNOT3	91	89.508	Macaca_fascicularis
ENSCVAG00000008168	cnot3a	68	92.857	ENSMMUG00000009698	CNOT3	100	96.078	Macaca_mulatta
ENSCVAG00000008168	cnot3a	74	88.103	ENSMNEG00000036750	CNOT3	91	89.508	Macaca_nemestrina
ENSCVAG00000008168	cnot3a	74	88.103	ENSMLEG00000036579	CNOT3	91	89.508	Mandrillus_leucophaeus
ENSCVAG00000008168	cnot3a	100	85.291	ENSMAMG00000019397	cnot3a	100	85.181	Mastacembelus_armatus
ENSCVAG00000008168	cnot3a	100	65.748	ENSMZEG00005002466	cnot3b	100	66.524	Maylandia_zebra
ENSCVAG00000008168	cnot3a	100	87.596	ENSMZEG00005016304	cnot3a	100	87.706	Maylandia_zebra
ENSCVAG00000008168	cnot3a	69	88.424	ENSMAUG00000014996	Cnot3	91	89.836	Mesocricetus_auratus
ENSCVAG00000008168	cnot3a	69	88.103	ENSMICG00000002370	CNOT3	91	89.508	Microcebus_murinus
ENSCVAG00000008168	cnot3a	100	81.908	ENSMMOG00000016446	cnot3a	100	82.018	Mola_mola
ENSCVAG00000008168	cnot3a	62	89.744	ENSMMOG00000013086	cnot3b	99	86.345	Mola_mola
ENSCVAG00000008168	cnot3a	60	89.508	ENSMODG00000004066	CNOT3	73	89.508	Monodelphis_domestica
ENSCVAG00000008168	cnot3a	100	84.615	ENSMALG00000009204	cnot3a	100	83.864	Monopterus_albus
ENSCVAG00000008168	cnot3a	59	86.149	ENSMALG00000004936	cnot3b	74	85.859	Monopterus_albus
ENSCVAG00000008168	cnot3a	69	88.424	MGP_CAROLIEiJ_G0029095	Cnot3	100	98.000	Mus_caroli
ENSCVAG00000008168	cnot3a	69	88.424	ENSMUSG00000035632	Cnot3	100	98.000	Mus_musculus
ENSCVAG00000008168	cnot3a	69	88.424	MGP_PahariEiJ_G0020964	Cnot3	100	98.000	Mus_pahari
ENSCVAG00000008168	cnot3a	69	88.424	MGP_SPRETEiJ_G0030148	Cnot3	100	98.000	Mus_spretus
ENSCVAG00000008168	cnot3a	69	88.424	ENSMPUG00000010352	CNOT3	91	89.508	Mustela_putorius_furo
ENSCVAG00000008168	cnot3a	69	88.103	ENSNGAG00000013266	Cnot3	91	89.508	Nannospalax_galili
ENSCVAG00000008168	cnot3a	88	77.326	ENSNBRG00000003336	cnot3b	96	89.381	Neolamprologus_brichardi
ENSCVAG00000008168	cnot3a	100	87.444	ENSNBRG00000002401	cnot3a	100	87.556	Neolamprologus_brichardi
ENSCVAG00000008168	cnot3a	78	73.333	ENSNLEG00000006272	CNOT3	67	90.361	Nomascus_leucogenys
ENSCVAG00000008168	cnot3a	69	88.103	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSCVAG00000008168	cnot3a	100	86.309	ENSONIG00000006568	cnot3a	100	86.747	Oreochromis_niloticus
ENSCVAG00000008168	cnot3a	69	90.157	ENSOCUG00000007691	CNOT3	91	89.508	Oryctolagus_cuniculus
ENSCVAG00000008168	cnot3a	100	86.188	ENSORLG00000011174	cnot3a	100	86.298	Oryzias_latipes
ENSCVAG00000008168	cnot3a	100	85.336	ENSORLG00020008009	cnot3a	100	85.667	Oryzias_latipes_hni
ENSCVAG00000008168	cnot3a	100	85.967	ENSORLG00015013729	cnot3a	100	85.525	Oryzias_latipes_hsok
ENSCVAG00000008168	cnot3a	100	65.668	ENSORLG00015019021	cnot3b	54	61.145	Oryzias_latipes_hsok
ENSCVAG00000008168	cnot3a	100	85.210	ENSOMEG00000010309	cnot3a	100	85.982	Oryzias_melastigma
ENSCVAG00000008168	cnot3a	83	75.190	ENSOGAG00000006945	CNOT3	91	89.508	Otolemur_garnettii
ENSCVAG00000008168	cnot3a	69	88.103	ENSPPAG00000002748	CNOT3	91	89.508	Pan_paniscus
ENSCVAG00000008168	cnot3a	77	75.063	ENSPPRG00000011705	CNOT3	91	89.508	Panthera_pardus
ENSCVAG00000008168	cnot3a	62	89.933	ENSPTIG00000008781	CNOT3	96	89.933	Panthera_tigris_altaica
ENSCVAG00000008168	cnot3a	69	88.103	ENSPTRG00000011444	CNOT3	91	89.508	Pan_troglodytes
ENSCVAG00000008168	cnot3a	69	88.103	ENSPTRG00000046717	-	91	89.508	Pan_troglodytes
ENSCVAG00000008168	cnot3a	74	88.103	ENSPANG00000009375	CNOT3	91	89.508	Papio_anubis
ENSCVAG00000008168	cnot3a	100	65.579	ENSPKIG00000011733	CNOT3	73	58.111	Paramormyrops_kingsleyae
ENSCVAG00000008168	cnot3a	68	94.444	ENSPKIG00000015967	-	99	94.444	Paramormyrops_kingsleyae
ENSCVAG00000008168	cnot3a	74	88.424	ENSPEMG00000024185	Cnot3	91	89.836	Peromyscus_maniculatus_bairdii
ENSCVAG00000008168	cnot3a	73	89.180	ENSPCIG00000023018	CNOT3	96	89.180	Phascolarctos_cinereus
ENSCVAG00000008168	cnot3a	100	92.605	ENSPFOG00000008693	cnot3a	93	97.697	Poecilia_formosa
ENSCVAG00000008168	cnot3a	100	92.920	ENSPLAG00000013324	cnot3a	100	92.920	Poecilia_latipinna
ENSCVAG00000008168	cnot3a	100	92.376	ENSPMEG00000017718	cnot3a	100	92.928	Poecilia_mexicana
ENSCVAG00000008168	cnot3a	100	89.474	ENSPREG00000007592	cnot3a	100	95.181	Poecilia_reticulata
ENSCVAG00000008168	cnot3a	69	87.781	ENSPPYG00000010372	CNOT3	91	89.180	Pongo_abelii
ENSCVAG00000008168	cnot3a	55	93.220	ENSPCAG00000011999	CNOT3	56	93.220	Procavia_capensis
ENSCVAG00000008168	cnot3a	69	88.103	ENSPCOG00000017673	CNOT3	91	89.508	Propithecus_coquereli
ENSCVAG00000008168	cnot3a	77	74.430	ENSPVAG00000015564	CNOT3	70	88.852	Pteropus_vampyrus
ENSCVAG00000008168	cnot3a	100	87.486	ENSPNYG00000002282	cnot3a	100	87.596	Pundamilia_nyererei
ENSCVAG00000008168	cnot3a	100	72.168	ENSPNAG00000017679	cnot3a	100	72.932	Pygocentrus_nattereri
ENSCVAG00000008168	cnot3a	69	88.424	ENSRNOG00000053234	Cnot3	91	89.836	Rattus_norvegicus
ENSCVAG00000008168	cnot3a	88	73.580	ENSRBIG00000031025	CNOT3	91	89.508	Rhinopithecus_bieti
ENSCVAG00000008168	cnot3a	88	73.827	ENSRROG00000003872	CNOT3	92	89.508	Rhinopithecus_roxellana
ENSCVAG00000008168	cnot3a	74	88.103	ENSSBOG00000030268	CNOT3	91	89.508	Saimiri_boliviensis_boliviensis
ENSCVAG00000008168	cnot3a	100	67.275	ENSSFOG00015000248	cnot3	100	69.121	Scleropages_formosus
ENSCVAG00000008168	cnot3a	100	68.988	ENSSFOG00015019203	-	100	69.770	Scleropages_formosus
ENSCVAG00000008168	cnot3a	100	85.621	ENSSMAG00000013235	cnot3a	100	85.294	Scophthalmus_maximus
ENSCVAG00000008168	cnot3a	100	87.090	ENSSDUG00000008181	cnot3a	100	98.291	Seriola_dumerili
ENSCVAG00000008168	cnot3a	96	87.727	ENSSLDG00000014733	cnot3a	99	87.386	Seriola_lalandi_dorsalis
ENSCVAG00000008168	cnot3a	82	83.776	ENSSPUG00000008510	CNOT3	89	89.508	Sphenodon_punctatus
ENSCVAG00000008168	cnot3a	96	86.023	ENSSPAG00000003858	cnot3a	93	96.454	Stegastes_partitus
ENSCVAG00000008168	cnot3a	69	88.103	ENSSSCG00000003264	CNOT3	91	89.508	Sus_scrofa
ENSCVAG00000008168	cnot3a	100	84.048	ENSTRUG00000015732	cnot3a	100	84.818	Takifugu_rubripes
ENSCVAG00000008168	cnot3a	94	80.930	ENSTNIG00000008082	cnot3a	100	79.677	Tetraodon_nigroviridis
ENSCVAG00000008168	cnot3a	69	88.424	ENSUAMG00000005234	CNOT3	91	89.836	Ursus_americanus
ENSCVAG00000008168	cnot3a	57	93.277	ENSUMAG00000010934	CNOT3	89	93.277	Ursus_maritimus
ENSCVAG00000008168	cnot3a	77	74.559	ENSVVUG00000008239	CNOT3	90	89.508	Vulpes_vulpes
ENSCVAG00000008168	cnot3a	70	85.759	ENSXETG00000003166	cnot3	89	87.419	Xenopus_tropicalis
ENSCVAG00000008168	cnot3a	100	85.430	ENSXCOG00000019460	cnot3a	98	95.142	Xiphophorus_couchianus
ENSCVAG00000008168	cnot3a	100	92.027	ENSXMAG00000012273	cnot3a	100	90.376	Xiphophorus_maculatus
ENSCVAG00000008168	cnot3a	100	63.191	ENSXMAG00000014176	cnot3b	100	63.113	Xiphophorus_maculatus