EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000008324 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 1659 bases
Position: chrKL652584.1:869017-870675
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000024312	RRM_1	PF00076.22	8.4e-30	1	2
ENSCVAP00000024312	RRM_1	PF00076.22	8.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000004514	-	699	-	ENSCVAP00000024312	232 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000008324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000008324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000008324	-	83	51.813	ENSCVAG00000018995	hnrnpa3	52	52.514
ENSCVAG00000008324	-	81	37.158	ENSCVAG00000017075	msi2a	55	37.059
ENSCVAG00000008324	-	87	37.321	ENSCVAG00000019790	hnrnpd	52	36.842
ENSCVAG00000008324	-	73	39.412	ENSCVAG00000019772	hnrnpaba	51	40.000
ENSCVAG00000008324	-	77	55.307	ENSCVAG00000012637	hnrnpa1a	66	49.099
ENSCVAG00000008324	-	86	38.537	ENSCVAG00000009100	MSI1	52	37.931
ENSCVAG00000008324	-	73	37.059	ENSCVAG00000002489	-	62	37.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000008324	-	84	90.769	ENSAOCG00000015914	-	70	90.769	Amphiprion_ocellaris
ENSCVAG00000008324	-	76	73.292	ENSAOCG00000015951	-	96	73.292	Amphiprion_ocellaris
ENSCVAG00000008324	-	93	86.977	ENSAPEG00000002224	-	82	90.769	Amphiprion_percula
ENSCVAG00000008324	-	76	73.292	ENSAPEG00000002274	-	96	73.292	Amphiprion_percula
ENSCVAG00000008324	-	83	90.155	ENSACLG00000008978	-	89	89.231	Astatotilapia_calliptera
ENSCVAG00000008324	-	76	34.416	ENSEBUG00000010003	-	80	35.849	Eptatretus_burgeri
ENSCVAG00000008324	-	76	75.152	ENSELUG00000014407	-	98	75.152	Esox_lucius
ENSCVAG00000008324	-	83	90.155	ENSHBUG00000023867	-	89	89.231	Haplochromis_burtoni
ENSCVAG00000008324	-	77	76.536	ENSHCOG00000007180	-	76	76.536	Hippocampus_comes
ENSCVAG00000008324	-	76	87.349	ENSLBEG00000006362	-	79	87.349	Labrus_bergylta
ENSCVAG00000008324	-	70	74.107	ENSLOCG00000012121	-	61	74.107	Lepisosteus_oculatus
ENSCVAG00000008324	-	84	90.722	ENSMAMG00000017728	-	74	90.256	Mastacembelus_armatus
ENSCVAG00000008324	-	78	89.503	ENSMZEG00005001063	-	81	90.000	Maylandia_zebra
ENSCVAG00000008324	-	76	72.222	ENSMMOG00000004242	-	98	72.222	Mola_mola
ENSCVAG00000008324	-	89	40.191	ENSMEUG00000003051	-	55	42.045	Notamacropus_eugenii
ENSCVAG00000008324	-	78	58.427	ENSORLG00000023176	-	58	59.538	Oryzias_latipes
ENSCVAG00000008324	-	79	58.470	ENSORLG00000030284	-	63	55.303	Oryzias_latipes
ENSCVAG00000008324	-	78	58.101	ENSORLG00000023542	-	61	59.195	Oryzias_latipes
ENSCVAG00000008324	-	85	56.364	ENSORLG00020007084	-	77	56.364	Oryzias_latipes_hni
ENSCVAG00000008324	-	76	57.803	ENSORLG00020006029	-	60	57.803	Oryzias_latipes_hni
ENSCVAG00000008324	-	76	91.954	ENSORLG00020007171	-	97	91.954	Oryzias_latipes_hni
ENSCVAG00000008324	-	89	55.556	ENSOMEG00000002084	-	70	67.073	Oryzias_melastigma
ENSCVAG00000008324	-	89	60.000	ENSOMEG00000002000	-	69	60.000	Oryzias_melastigma
ENSCVAG00000008324	-	76	53.614	ENSOMEG00000009566	-	87	53.614	Oryzias_melastigma
ENSCVAG00000008324	-	99	57.219	ENSOMEG00000023475	-	72	57.778	Oryzias_melastigma
ENSCVAG00000008324	-	74	48.851	ENSOMEG00000006327	-	60	48.851	Oryzias_melastigma
ENSCVAG00000008324	-	90	52.252	ENSOMEG00000006903	-	69	58.333	Oryzias_melastigma
ENSCVAG00000008324	-	91	51.818	ENSOMEG00000012368	-	67	57.778	Oryzias_melastigma
ENSCVAG00000008324	-	98	49.145	ENSOMEG00000002509	-	76	56.667	Oryzias_melastigma
ENSCVAG00000008324	-	99	51.802	ENSOMEG00000021030	-	81	51.163	Oryzias_melastigma
ENSCVAG00000008324	-	91	100.000	ENSPREG00000010603	-	70	100.000	Poecilia_reticulata
ENSCVAG00000008324	-	83	90.155	ENSPNYG00000020763	-	89	89.231	Pundamilia_nyererei
ENSCVAG00000008324	-	75	70.370	ENSPNAG00000018051	-	81	70.370	Pygocentrus_nattereri
ENSCVAG00000008324	-	79	60.795	ENSSHAG00000015609	-	81	60.795	Sarcophilus_harrisii
ENSCVAG00000008324	-	76	91.566	ENSSDUG00000002394	-	87	91.566	Seriola_dumerili
ENSCVAG00000008324	-	75	74.342	ENSSLDG00000024685	-	86	74.342	Seriola_lalandi_dorsalis