EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000008369 (Gene tree)
Gene ID
107082597
Gene Symbol
si:ch211-219a4.3
Alias
zgc:113527
Full Name
poly
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
55252 bases
Position
chrKL652503.1:2263471-2318722
Accession
107082597
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000006771PARPPF00644.204.1e-2811
ENSCVAP00000024337PARPPF00644.207.7e-2811
ENSCVAP00000024334PARPPF00644.203.8e-2711
ENSCVAP00000024323PARPPF00644.206.4e-2511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000004498-5551XM_015371376ENSCVAP000000067311718 (aa)XP_015226862-
ENSCVAT00000004457-6522-ENSCVAP000000243341811 (aa)--
ENSCVAT00000004481-6288XM_015371393ENSCVAP000000243231811 (aa)XP_015226879UPI0007425292
ENSCVAT00000004414-6525XM_015371369ENSCVAP000000067711812 (aa)XP_015226855-
ENSCVAT00000004436-6522XM_015371401ENSCVAP000000243371811 (aa)XP_015226887UPI000742ADC5
Gene Model
Click here to download ENSCVAG00000008369's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000008369's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000008369si:ch211-219a4.39235.062ENSCVAG00000009352-9849.485
ENSCVAG00000008369si:ch211-219a4.36530.515ENSCVAG00000014299-7230.464
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000008369si:ch211-219a4.310033.659ENSG00000173193PARP149933.821Homo_sapiens
ENSCVAG00000008369si:ch211-219a4.39660.493ENSAPOG00000006513si:ch211-219a4.310060.493Acanthochromis_polyacanthus
ENSCVAG00000008369si:ch211-219a4.39932.757ENSAMEG00000004862PARP149932.865Ailuropoda_melanoleuca
ENSCVAG00000008369si:ch211-219a4.310055.495ENSACIG00000004252si:ch211-219a4.310063.636Amphilophus_citrinellus
ENSCVAG00000008369si:ch211-219a4.310056.844ENSACIG00000003944si:ch211-219a4.39466.834Amphilophus_citrinellus
ENSCVAG00000008369si:ch211-219a4.39956.938ENSACIG00000004115si:ch211-219a4.39956.938Amphilophus_citrinellus
ENSCVAG00000008369si:ch211-219a4.310061.327ENSAOCG00000012848si:ch211-219a4.310061.327Amphiprion_ocellaris
ENSCVAG00000008369si:ch211-219a4.310061.108ENSAPEG00000006205si:ch211-219a4.310061.108Amphiprion_percula
ENSCVAG00000008369si:ch211-219a4.35131.357ENSATEG00000002587-9334.568Anabas_testudineus
ENSCVAG00000008369si:ch211-219a4.310059.123ENSATEG00000010770si:ch211-219a4.310059.101Anabas_testudineus
ENSCVAG00000008369si:ch211-219a4.39734.373ENSAPLG00000010062-9934.373Anas_platyrhynchos
ENSCVAG00000008369si:ch211-219a4.39934.572ENSAPLG00000010410-9934.667Anas_platyrhynchos
ENSCVAG00000008369si:ch211-219a4.39935.199ENSACAG00000009769-9935.126Anolis_carolinensis
ENSCVAG00000008369si:ch211-219a4.310033.495ENSANAG00000030799PARP149933.514Aotus_nancymaae
ENSCVAG00000008369si:ch211-219a4.35646.143ENSACLG00000005418-9372.316Astatotilapia_calliptera
ENSCVAG00000008369si:ch211-219a4.36733.607ENSACLG00000013074-7233.607Astatotilapia_calliptera
ENSCVAG00000008369si:ch211-219a4.310058.132ENSACLG00000005450si:ch211-219a4.310058.132Astatotilapia_calliptera
ENSCVAG00000008369si:ch211-219a4.36051.264ENSAMXG00000031852-9951.124Astyanax_mexicanus
ENSCVAG00000008369si:ch211-219a4.36048.451ENSAMXG00000043329-9948.310Astyanax_mexicanus
ENSCVAG00000008369si:ch211-219a4.38254.000ENSBTAG00000016656PARP149854.000Bos_taurus
ENSCVAG00000008369si:ch211-219a4.310033.297ENSCJAG00000007930PARP149933.297Callithrix_jacchus
ENSCVAG00000008369si:ch211-219a4.39932.413ENSCAFG00000011970PARP149932.576Canis_familiaris
ENSCVAG00000008369si:ch211-219a4.39932.738ENSCAFG00020005495PARP149932.792Canis_lupus_dingo
ENSCVAG00000008369si:ch211-219a4.310034.503ENSCHIG00000018391PARP149934.503Capra_hircus
ENSCVAG00000008369si:ch211-219a4.310033.532ENSTSYG00000005576PARP149933.496Carlito_syrichta
ENSCVAG00000008369si:ch211-219a4.39730.986ENSCAPG00000016922PARP149937.325Cavia_aperea
ENSCVAG00000008369si:ch211-219a4.39731.327ENSCPOG00000020020PARP149931.327Cavia_porcellus
ENSCVAG00000008369si:ch211-219a4.310033.261ENSCCAG00000028961PARP149933.225Cebus_capucinus
ENSCVAG00000008369si:ch211-219a4.310034.179ENSCATG00000033839PARP149934.250Cercocebus_atys
ENSCVAG00000008369si:ch211-219a4.39932.129ENSCLAG00000009862PARP149932.129Chinchilla_lanigera
ENSCVAG00000008369si:ch211-219a4.310034.161ENSCSAG00000007464PARP149934.232Chlorocebus_sabaeus
ENSCVAG00000008369si:ch211-219a4.38236.990ENSCHOG00000010569PARP148336.990Choloepus_hoffmanni
ENSCVAG00000008369si:ch211-219a4.39934.479ENSCPBG00000013908-9934.425Chrysemys_picta_bellii
ENSCVAG00000008369si:ch211-219a4.39936.279ENSCPBG00000013912-9936.220Chrysemys_picta_bellii
ENSCVAG00000008369si:ch211-219a4.310034.108ENSCANG00000040574PARP149934.179Colobus_angolensis_palliatus
ENSCVAG00000008369si:ch211-219a4.310034.524ENSCGRG00001006699Parp149934.434Cricetulus_griseus_chok1gshd
ENSCVAG00000008369si:ch211-219a4.310034.524ENSCGRG00000014558Parp149934.434Cricetulus_griseus_crigri
ENSCVAG00000008369si:ch211-219a4.38950.031ENSCSEG00000017936si:ch211-219a4.39966.667Cynoglossus_semilaevis
ENSCVAG00000008369si:ch211-219a4.39941.599ENSDARG00000040445si:ch211-219a4.39949.440Danio_rerio
ENSCVAG00000008369si:ch211-219a4.39933.333ENSDNOG00000015400PARP149933.333Dasypus_novemcinctus
ENSCVAG00000008369si:ch211-219a4.310033.423ENSDORG00000000690Parp149933.369Dipodomys_ordii
ENSCVAG00000008369si:ch211-219a4.39138.806ENSETEG00000002790PARP149538.951Echinops_telfairi
ENSCVAG00000008369si:ch211-219a4.310033.315ENSEASG00005016553PARP1410033.315Equus_asinus_asinus
ENSCVAG00000008369si:ch211-219a4.310038.728ENSECAG00000024988PARP149838.728Equus_caballus
ENSCVAG00000008369si:ch211-219a4.39133.788ENSEEUG00000002136PARP149933.749Erinaceus_europaeus
ENSCVAG00000008369si:ch211-219a4.39655.665ENSELUG00000009798si:ch211-219a4.310055.665Esox_lucius
ENSCVAG00000008369si:ch211-219a4.39933.694ENSFCAG00000000930PARP149933.694Felis_catus
ENSCVAG00000008369si:ch211-219a4.39934.235ENSFALG00000013541-9634.216Ficedula_albicollis
ENSCVAG00000008369si:ch211-219a4.39833.498ENSFALG00000013545-9933.498Ficedula_albicollis
ENSCVAG00000008369si:ch211-219a4.310033.262ENSFDAG00000008689PARP149933.065Fukomys_damarensis
ENSCVAG00000008369si:ch211-219a4.39576.273ENSFHEG00000007383si:ch211-219a4.39876.273Fundulus_heteroclitus
ENSCVAG00000008369si:ch211-219a4.35433.803ENSGMOG00000011231-9751.351Gadus_morhua
ENSCVAG00000008369si:ch211-219a4.38463.158ENSGMOG00000009701-9063.158Gadus_morhua
ENSCVAG00000008369si:ch211-219a4.38864.912ENSGMOG00000008501-9964.912Gadus_morhua
ENSCVAG00000008369si:ch211-219a4.39933.210ENSGALG00000012072-9933.404Gallus_gallus
ENSCVAG00000008369si:ch211-219a4.39932.564ENSGALG00000026422-9932.780Gallus_gallus
ENSCVAG00000008369si:ch211-219a4.310071.625ENSGAFG00000009879si:ch211-219a4.39974.422Gambusia_affinis
ENSCVAG00000008369si:ch211-219a4.310056.202ENSGACG00000002353si:ch211-219a4.39867.677Gasterosteus_aculeatus
ENSCVAG00000008369si:ch211-219a4.39135.263ENSGAGG00000000808-9934.859Gopherus_agassizii
ENSCVAG00000008369si:ch211-219a4.39434.571ENSGAGG00000017725-9937.267Gopherus_agassizii
ENSCVAG00000008369si:ch211-219a4.310033.713ENSGGOG00000001623PARP149933.713Gorilla_gorilla
ENSCVAG00000008369si:ch211-219a4.310032.814ENSHGLG00000001930PARP149932.868Heterocephalus_glaber_female
ENSCVAG00000008369si:ch211-219a4.310032.377ENSHGLG00100018459PARP149932.557Heterocephalus_glaber_male
ENSCVAG00000008369si:ch211-219a4.39942.383ENSIPUG00000003936si:ch211-219a4.39942.274Ictalurus_punctatus
ENSCVAG00000008369si:ch211-219a4.310033.604ENSSTOG00000019423PARP1410033.658Ictidomys_tridecemlineatus
ENSCVAG00000008369si:ch211-219a4.310064.780ENSKMAG00000019118si:ch211-219a4.310064.909Kryptolebias_marmoratus
ENSCVAG00000008369si:ch211-219a4.39154.973ENSLBEG00000025830si:ch211-219a4.310054.973Labrus_bergylta
ENSCVAG00000008369si:ch211-219a4.310036.315ENSLACG00000012073PARP149936.037Latimeria_chalumnae
ENSCVAG00000008369si:ch211-219a4.39939.721ENSLOCG00000003463-9939.721Lepisosteus_oculatus
ENSCVAG00000008369si:ch211-219a4.310042.849ENSLOCG00000003430si:ch211-219a4.310043.205Lepisosteus_oculatus
ENSCVAG00000008369si:ch211-219a4.36130.265ENSLOCG00000000239si:cabz01030277.19930.177Lepisosteus_oculatus
ENSCVAG00000008369si:ch211-219a4.39131.775ENSLOCG00000001612-9731.232Lepisosteus_oculatus
ENSCVAG00000008369si:ch211-219a4.39732.045ENSLAFG00000021607PARP149932.045Loxodonta_africana
ENSCVAG00000008369si:ch211-219a4.310034.215ENSMFAG00000038097PARP149934.286Macaca_fascicularis
ENSCVAG00000008369si:ch211-219a4.310034.161ENSMMUG00000022569PARP149934.232Macaca_mulatta
ENSCVAG00000008369si:ch211-219a4.310034.269ENSMNEG00000035861PARP149934.340Macaca_nemestrina
ENSCVAG00000008369si:ch211-219a4.310034.125ENSMLEG00000041852PARP149934.196Mandrillus_leucophaeus
ENSCVAG00000008369si:ch211-219a4.36639.024ENSMAMG00000014821si:cabz01030277.17139.024Mastacembelus_armatus
ENSCVAG00000008369si:ch211-219a4.310058.342ENSMAMG00000012417si:ch211-219a4.310058.397Mastacembelus_armatus
ENSCVAG00000008369si:ch211-219a4.310058.516ENSMZEG00005016195si:ch211-219a4.310058.516Maylandia_zebra
ENSCVAG00000008369si:ch211-219a4.310054.675ENSMZEG00005025678si:ch211-219a4.310068.182Maylandia_zebra
ENSCVAG00000008369si:ch211-219a4.39233.893ENSMGAG00000012246-9933.970Meleagris_gallopavo
ENSCVAG00000008369si:ch211-219a4.310033.207ENSMICG00000049225PARP149633.225Microcebus_murinus
ENSCVAG00000008369si:ch211-219a4.37539.444ENSMOCG00000021121Parp148839.444Microtus_ochrogaster
ENSCVAG00000008369si:ch211-219a4.35259.242ENSMMOG00000005282-9860.393Mola_mola
ENSCVAG00000008369si:ch211-219a4.35258.294ENSMMOG00000005277-9859.411Mola_mola
ENSCVAG00000008369si:ch211-219a4.39731.025ENSMODG00000018308-9730.970Monodelphis_domestica
ENSCVAG00000008369si:ch211-219a4.39933.747ENSMODG00000018318-9933.621Monodelphis_domestica
ENSCVAG00000008369si:ch211-219a4.310034.233MGP_CAROLIEiJ_G0020706Parp149934.233Mus_caroli
ENSCVAG00000008369si:ch211-219a4.310033.871ENSMUSG00000034422Parp149933.888Mus_musculus
ENSCVAG00000008369si:ch211-219a4.310034.212MGP_PahariEiJ_G0016409Parp149934.229Mus_pahari
ENSCVAG00000008369si:ch211-219a4.310034.266MGP_SPRETEiJ_G0021604Parp149934.266Mus_spretus
ENSCVAG00000008369si:ch211-219a4.39932.776ENSMPUG00000004629PARP149932.758Mustela_putorius_furo
ENSCVAG00000008369si:ch211-219a4.39233.373ENSMLUG00000008047-9933.353Myotis_lucifugus
ENSCVAG00000008369si:ch211-219a4.310033.854ENSMLUG00000030765-9933.819Myotis_lucifugus
ENSCVAG00000008369si:ch211-219a4.310033.820ENSMLUG00000023256-9933.928Myotis_lucifugus
ENSCVAG00000008369si:ch211-219a4.38634.029ENSMLUG00000022755-9933.987Myotis_lucifugus
ENSCVAG00000008369si:ch211-219a4.310038.202ENSNGAG00000024058Parp1410038.289Nannospalax_galili
ENSCVAG00000008369si:ch211-219a4.39733.072ENSNLEG00000000311PARP149933.240Nomascus_leucogenys
ENSCVAG00000008369si:ch211-219a4.39031.709ENSMEUG00000003239-9631.709Notamacropus_eugenii
ENSCVAG00000008369si:ch211-219a4.39442.781ENSOPRG00000013872PARP148642.781Ochotona_princeps
ENSCVAG00000008369si:ch211-219a4.310032.356ENSODEG00000008430PARP149932.337Octodon_degus
ENSCVAG00000008369si:ch211-219a4.35636.220ENSONIG00000007870-9936.220Oreochromis_niloticus
ENSCVAG00000008369si:ch211-219a4.39759.144ENSONIG00000004515si:ch211-219a4.310059.144Oreochromis_niloticus
ENSCVAG00000008369si:ch211-219a4.39732.369ENSOCUG00000003418PARP149732.369Oryctolagus_cuniculus
ENSCVAG00000008369si:ch211-219a4.35260.629ENSORLG00000008781-10060.180Oryzias_latipes
ENSCVAG00000008369si:ch211-219a4.35331.597ENSORLG00000007845-8931.597Oryzias_latipes
ENSCVAG00000008369si:ch211-219a4.36733.673ENSORLG00020005938-7233.673Oryzias_latipes_hni
ENSCVAG00000008369si:ch211-219a4.310061.499ENSORLG00015021971si:ch211-219a4.39470.256Oryzias_latipes_hsok
ENSCVAG00000008369si:ch211-219a4.39356.209ENSOMEG00000019715si:ch211-219a4.39572.727Oryzias_melastigma
ENSCVAG00000008369si:ch211-219a4.37539.130ENSOGAG00000012454PARP147339.130Otolemur_garnettii
ENSCVAG00000008369si:ch211-219a4.310034.270ENSOARG00000020160PARP149934.270Ovis_aries
ENSCVAG00000008369si:ch211-219a4.310033.730ENSPPAG00000039852PARP149933.893Pan_paniscus
ENSCVAG00000008369si:ch211-219a4.39933.640ENSPPRG00000002799PARP149933.749Panthera_pardus
ENSCVAG00000008369si:ch211-219a4.39933.694ENSPTIG00000011462PARP149933.803Panthera_tigris_altaica
ENSCVAG00000008369si:ch211-219a4.310033.713ENSPTRG00000015297PARP149933.983Pan_troglodytes
ENSCVAG00000008369si:ch211-219a4.310034.071ENSPANG00000000522PARP149934.142Papio_anubis
ENSCVAG00000008369si:ch211-219a4.37438.272ENSPKIG00000022431-9038.272Paramormyrops_kingsleyae
ENSCVAG00000008369si:ch211-219a4.35642.757ENSPKIG00000004027-9942.757Paramormyrops_kingsleyae
ENSCVAG00000008369si:ch211-219a4.39935.745ENSPSIG00000003516PARP149935.764Pelodiscus_sinensis
ENSCVAG00000008369si:ch211-219a4.310034.916ENSPEMG00000008286Parp149934.933Peromyscus_maniculatus_bairdii
ENSCVAG00000008369si:ch211-219a4.38737.500ENSPMAG00000001173-8537.500Petromyzon_marinus
ENSCVAG00000008369si:ch211-219a4.35333.846ENSPFOG00000000012-9933.846Poecilia_formosa
ENSCVAG00000008369si:ch211-219a4.310076.445ENSPFOG00000016743si:ch211-219a4.310080.571Poecilia_formosa
ENSCVAG00000008369si:ch211-219a4.37233.871ENSPFOG00000005470-9234.872Poecilia_formosa
ENSCVAG00000008369si:ch211-219a4.310074.270ENSPLAG00000023145si:ch211-219a4.310074.270Poecilia_latipinna
ENSCVAG00000008369si:ch211-219a4.310075.881ENSPMEG00000000483si:ch211-219a4.310075.826Poecilia_mexicana
ENSCVAG00000008369si:ch211-219a4.35045.455ENSPMEG00000004328-5545.455Poecilia_mexicana
ENSCVAG00000008369si:ch211-219a4.35673.684ENSPREG00000019242-10073.684Poecilia_reticulata
ENSCVAG00000008369si:ch211-219a4.35655.204ENSPREG00000019182-8875.281Poecilia_reticulata
ENSCVAG00000008369si:ch211-219a4.38634.068ENSPPYG00000013479PARP149934.068Pongo_abelii
ENSCVAG00000008369si:ch211-219a4.37254.605ENSPCAG00000005805-6654.605Procavia_capensis
ENSCVAG00000008369si:ch211-219a4.310033.135ENSPCOG00000007904PARP149933.153Propithecus_coquereli
ENSCVAG00000008369si:ch211-219a4.38538.343ENSPVAG00000012722PARP149538.343Pteropus_vampyrus
ENSCVAG00000008369si:ch211-219a4.35258.838ENSPNYG00000001714-9673.377Pundamilia_nyererei
ENSCVAG00000008369si:ch211-219a4.35660.900ENSPNYG00000013937-10067.677Pundamilia_nyererei
ENSCVAG00000008369si:ch211-219a4.39956.112ENSPNYG00000001481si:ch211-219a4.39962.963Pundamilia_nyererei
ENSCVAG00000008369si:ch211-219a4.39244.017ENSPNAG00000028188si:ch211-219a4.39943.983Pygocentrus_nattereri
ENSCVAG00000008369si:ch211-219a4.310034.287ENSRNOG00000023334Parp149934.341Rattus_norvegicus
ENSCVAG00000008369si:ch211-219a4.310033.963ENSRBIG00000042403PARP149934.035Rhinopithecus_bieti
ENSCVAG00000008369si:ch211-219a4.310034.017ENSRROG00000042264PARP149934.088Rhinopithecus_roxellana
ENSCVAG00000008369si:ch211-219a4.310034.483ENSSBOG00000032798PARP149939.765Saimiri_boliviensis_boliviensis
ENSCVAG00000008369si:ch211-219a4.39934.056ENSSHAG00000002478PARP149933.876Sarcophilus_harrisii
ENSCVAG00000008369si:ch211-219a4.39241.652ENSSFOG00015022852si:ch211-219a4.39941.359Scleropages_formosus
ENSCVAG00000008369si:ch211-219a4.39939.951ENSSFOG00015001605-9255.921Scleropages_formosus
ENSCVAG00000008369si:ch211-219a4.310057.166ENSSMAG00000003869si:ch211-219a4.310057.166Scophthalmus_maximus
ENSCVAG00000008369si:ch211-219a4.310060.022ENSSDUG00000009289si:ch211-219a4.310060.022Seriola_dumerili
ENSCVAG00000008369si:ch211-219a4.310060.242ENSSLDG00000020946si:ch211-219a4.310060.242Seriola_lalandi_dorsalis
ENSCVAG00000008369si:ch211-219a4.39137.607ENSSARG00000011299PARP149537.607Sorex_araneus
ENSCVAG00000008369si:ch211-219a4.39237.298ENSSPUG00000016288-9837.319Sphenodon_punctatus
ENSCVAG00000008369si:ch211-219a4.39135.110ENSSPUG00000016301-9935.030Sphenodon_punctatus
ENSCVAG00000008369si:ch211-219a4.39859.553ENSSPAG00000009605si:ch211-219a4.39959.553Stegastes_partitus
ENSCVAG00000008369si:ch211-219a4.310033.261ENSSSCG00000011874PARP149933.207Sus_scrofa
ENSCVAG00000008369si:ch211-219a4.38534.630ENSTGUG00000003925PARP1410034.419Taeniopygia_guttata
ENSCVAG00000008369si:ch211-219a4.35054.688ENSTRUG00000004579-9468.462Takifugu_rubripes
ENSCVAG00000008369si:ch211-219a4.39932.615ENSUMAG00000025217PARP149932.507Ursus_maritimus
ENSCVAG00000008369si:ch211-219a4.37552.284ENSVPAG00000002158PARP148052.284Vicugna_pacos
ENSCVAG00000008369si:ch211-219a4.39740.526ENSVVUG00000022533PARP149940.314Vulpes_vulpes
ENSCVAG00000008369si:ch211-219a4.39935.517ENSXETG00000023399parp14.29935.320Xenopus_tropicalis
ENSCVAG00000008369si:ch211-219a4.35840.594ENSXETG00000023400-9941.602Xenopus_tropicalis
ENSCVAG00000008369si:ch211-219a4.38434.554ENSXETG00000023401-9934.467Xenopus_tropicalis
ENSCVAG00000008369si:ch211-219a4.35674.671ENSXCOG00000014707-9681.046Xiphophorus_couchianus
ENSCVAG00000008369si:ch211-219a4.39873.711ENSXMAG00000026293-9973.711Xiphophorus_maculatus
ENSCVAG00000008369si:ch211-219a4.310075.413ENSXMAG00000007367si:ch211-219a4.310075.413Xiphophorus_maculatus
ENSCVAG00000008369si:ch211-219a4.310073.638ENSXMAG00000026958si:ch211-219a4.310073.638Xiphophorus_maculatus

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