EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000008371 (Gene tree)
Gene ID: 107087647
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 25968 bases
Position: chrKL652689.1:694008-719975
Accession: 107087647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000006732	AARP2CN	PF08142.12	5.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000004486	-	4725	XM_015379331	ENSCVAP00000006732	1194 (aa)	XP_015234817	UPI000742A6AF

Gene Model

Click here to download ENSCVAG00000008371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000008371's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000008371	bms1	97	67.901	ENSG00000165733	BMS1	80	75.362	Homo_sapiens
ENSCVAG00000008371	bms1	87	81.073	ENSAPOG00000002296	bms1	100	80.357	Acanthochromis_polyacanthus
ENSCVAG00000008371	bms1	90	74.142	ENSAMEG00000016834	BMS1	80	74.818	Ailuropoda_melanoleuca
ENSCVAG00000008371	bms1	99	78.002	ENSACIG00000002588	bms1	100	77.023	Amphilophus_citrinellus
ENSCVAG00000008371	bms1	100	81.633	ENSAOCG00000018088	bms1	100	81.663	Amphiprion_ocellaris
ENSCVAG00000008371	bms1	100	80.813	ENSAPEG00000014673	bms1	100	81.107	Amphiprion_percula
ENSCVAG00000008371	bms1	100	80.033	ENSATEG00000023465	bms1	100	79.787	Anabas_testudineus
ENSCVAG00000008371	bms1	90	71.555	ENSAPLG00000003759	BMS1	85	71.555	Anas_platyrhynchos
ENSCVAG00000008371	bms1	99	65.385	ENSACAG00000004537	-	80	75.000	Anolis_carolinensis
ENSCVAG00000008371	bms1	95	68.379	ENSANAG00000023432	BMS1	85	67.689	Aotus_nancymaae
ENSCVAG00000008371	bms1	100	79.270	ENSACLG00000001294	bms1	100	79.519	Astatotilapia_calliptera
ENSCVAG00000008371	bms1	52	76.763	ENSAMXG00000011236	bms1	50	76.763	Astyanax_mexicanus
ENSCVAG00000008371	bms1	99	68.726	ENSBTAG00000012878	BMS1	85	69.375	Bos_taurus
ENSCVAG00000008371	bms1	86	54.187	WBGene00022021	Y61A9LA.10	96	53.027	Caenorhabditis_elegans
ENSCVAG00000008371	bms1	97	67.852	ENSCJAG00000021705	BMS1	85	68.269	Callithrix_jacchus
ENSCVAG00000008371	bms1	96	68.462	ENSCAFG00000007114	BMS1	85	68.498	Canis_familiaris
ENSCVAG00000008371	bms1	96	68.462	ENSCAFG00020025282	BMS1	85	68.498	Canis_lupus_dingo
ENSCVAG00000008371	bms1	99	68.665	ENSCHIG00000023251	BMS1	85	69.712	Capra_hircus
ENSCVAG00000008371	bms1	99	66.477	ENSCAPG00000008652	BMS1	85	65.281	Cavia_aperea
ENSCVAG00000008371	bms1	99	67.424	ENSCPOG00000000502	BMS1	85	67.581	Cavia_porcellus
ENSCVAG00000008371	bms1	53	57.969	ENSCCAG00000024969	-	84	58.013	Cebus_capucinus
ENSCVAG00000008371	bms1	54	67.901	ENSCATG00000030625	-	85	69.082	Cercocebus_atys
ENSCVAG00000008371	bms1	83	53.922	ENSCATG00000008695	-	68	57.428	Cercocebus_atys
ENSCVAG00000008371	bms1	95	69.098	ENSCLAG00000002446	BMS1	80	74.879	Chinchilla_lanigera
ENSCVAG00000008371	bms1	97	67.901	ENSCSAG00000011118	BMS1	85	69.243	Chlorocebus_sabaeus
ENSCVAG00000008371	bms1	99	61.920	ENSCHOG00000011055	BMS1	85	68.710	Choloepus_hoffmanni
ENSCVAG00000008371	bms1	96	70.000	ENSCPBG00000025581	BMS1	84	69.887	Chrysemys_picta_bellii
ENSCVAG00000008371	bms1	84	62.217	ENSCING00000003181	-	96	60.848	Ciona_intestinalis
ENSCVAG00000008371	bms1	55	70.850	ENSCSAVG00000004113	-	92	51.828	Ciona_savignyi
ENSCVAG00000008371	bms1	97	67.901	ENSCANG00000011609	BMS1	85	69.243	Colobus_angolensis_palliatus
ENSCVAG00000008371	bms1	98	62.783	ENSCGRG00001019461	Bms1	80	75.362	Cricetulus_griseus_chok1gshd
ENSCVAG00000008371	bms1	98	62.940	ENSCGRG00000009016	Bms1	80	75.362	Cricetulus_griseus_crigri
ENSCVAG00000008371	bms1	100	76.171	ENSCSEG00000002469	bms1	100	76.252	Cynoglossus_semilaevis
ENSCVAG00000008371	bms1	99	73.105	ENSDARG00000054154	bms1	93	77.496	Danio_rerio
ENSCVAG00000008371	bms1	97	67.385	ENSDNOG00000015761	BMS1	80	74.057	Dasypus_novemcinctus
ENSCVAG00000008371	bms1	95	69.614	ENSDORG00000002982	Bms1	85	70.113	Dipodomys_ordii
ENSCVAG00000008371	bms1	84	68.750	ENSETEG00000009554	BMS1	70	72.464	Echinops_telfairi
ENSCVAG00000008371	bms1	96	68.025	ENSEASG00005006894	BMS1	87	68.429	Equus_asinus_asinus
ENSCVAG00000008371	bms1	96	68.069	ENSECAG00000001358	BMS1	85	68.269	Equus_caballus
ENSCVAG00000008371	bms1	100	73.458	ENSELUG00000001756	bms1	72	89.143	Esox_lucius
ENSCVAG00000008371	bms1	99	62.141	ENSFCAG00000011220	BMS1	85	68.921	Felis_catus
ENSCVAG00000008371	bms1	99	66.418	ENSFALG00000006882	BMS1	84	70.900	Ficedula_albicollis
ENSCVAG00000008371	bms1	99	61.845	ENSFDAG00000001422	BMS1	87	67.909	Fukomys_damarensis
ENSCVAG00000008371	bms1	100	88.462	ENSFHEG00000003367	bms1	100	87.782	Fundulus_heteroclitus
ENSCVAG00000008371	bms1	99	72.007	ENSGMOG00000000718	bms1	97	71.088	Gadus_morhua
ENSCVAG00000008371	bms1	99	70.323	ENSGALG00000002624	BMS1	86	70.048	Gallus_gallus
ENSCVAG00000008371	bms1	50	90.868	ENSGAFG00000009067	bms1	96	75.912	Gambusia_affinis
ENSCVAG00000008371	bms1	97	82.212	ENSGACG00000015334	bms1	89	81.731	Gasterosteus_aculeatus
ENSCVAG00000008371	bms1	97	70.227	ENSGAGG00000003467	BMS1	87	70.227	Gopherus_agassizii
ENSCVAG00000008371	bms1	100	79.734	ENSHBUG00000022628	bms1	100	79.402	Haplochromis_burtoni
ENSCVAG00000008371	bms1	98	67.868	ENSHGLG00000000477	BMS1	87	68.548	Heterocephalus_glaber_female
ENSCVAG00000008371	bms1	98	67.868	ENSHGLG00100002176	BMS1	87	68.548	Heterocephalus_glaber_male
ENSCVAG00000008371	bms1	99	78.824	ENSHCOG00000017604	bms1	99	78.729	Hippocampus_comes
ENSCVAG00000008371	bms1	99	71.316	ENSIPUG00000017855	bms1	99	71.120	Ictalurus_punctatus
ENSCVAG00000008371	bms1	99	68.279	ENSSTOG00000015063	BMS1	85	69.417	Ictidomys_tridecemlineatus
ENSCVAG00000008371	bms1	96	68.232	ENSJJAG00000017328	Bms1	87	68.323	Jaculus_jaculus
ENSCVAG00000008371	bms1	65	77.308	ENSKMAG00000021982	bms1	95	75.526	Kryptolebias_marmoratus
ENSCVAG00000008371	bms1	100	77.896	ENSLBEG00000028208	bms1	100	77.979	Labrus_bergylta
ENSCVAG00000008371	bms1	95	65.974	ENSLACG00000001600	BMS1	86	66.324	Latimeria_chalumnae
ENSCVAG00000008371	bms1	54	76.698	ENSLOCG00000012914	bms1	98	73.067	Lepisosteus_oculatus
ENSCVAG00000008371	bms1	98	66.462	ENSLAFG00000006250	BMS1	80	74.334	Loxodonta_africana
ENSCVAG00000008371	bms1	87	66.344	ENSMFAG00000037771	BMS1	93	67.635	Macaca_fascicularis
ENSCVAG00000008371	bms1	87	61.940	ENSMMUG00000007426	-	76	64.016	Macaca_mulatta
ENSCVAG00000008371	bms1	81	53.137	ENSMLEG00000029084	-	75	56.443	Mandrillus_leucophaeus
ENSCVAG00000008371	bms1	100	78.501	ENSMAMG00000020855	bms1	100	77.558	Mastacembelus_armatus
ENSCVAG00000008371	bms1	100	79.187	ENSMZEG00005005663	bms1	100	79.436	Maylandia_zebra
ENSCVAG00000008371	bms1	91	70.323	ENSMGAG00000001170	BMS1	86	69.887	Meleagris_gallopavo
ENSCVAG00000008371	bms1	98	62.323	ENSMAUG00000002195	Bms1	80	74.638	Mesocricetus_auratus
ENSCVAG00000008371	bms1	99	61.443	ENSMICG00000009977	BMS1	85	68.447	Microcebus_murinus
ENSCVAG00000008371	bms1	96	67.127	ENSMOCG00000002038	Bms1	85	68.000	Microtus_ochrogaster
ENSCVAG00000008371	bms1	100	79.434	ENSMMOG00000000977	bms1	100	78.684	Mola_mola
ENSCVAG00000008371	bms1	99	62.672	ENSMODG00000001177	BMS1	79	76.812	Monodelphis_domestica
ENSCVAG00000008371	bms1	100	79.555	ENSMALG00000009680	bms1	99	79.549	Monopterus_albus
ENSCVAG00000008371	bms1	83	57.945	MGP_CAROLIEiJ_G0028785	-	61	77.836	Mus_caroli
ENSCVAG00000008371	bms1	98	63.139	ENSMUSG00000030138	Bms1	80	74.638	Mus_musculus
ENSCVAG00000008371	bms1	98	66.272	MGP_PahariEiJ_G0022539	Bms1	85	67.737	Mus_pahari
ENSCVAG00000008371	bms1	98	66.341	MGP_SPRETEiJ_G0029816	Bms1	85	67.040	Mus_spretus
ENSCVAG00000008371	bms1	97	68.527	ENSMPUG00000017276	BMS1	85	69.579	Mustela_putorius_furo
ENSCVAG00000008371	bms1	99	62.393	ENSMLUG00000003260	BMS1	80	74.038	Myotis_lucifugus
ENSCVAG00000008371	bms1	99	58.138	ENSNGAG00000015258	Bms1	83	67.702	Nannospalax_galili
ENSCVAG00000008371	bms1	97	65.741	ENSNLEG00000015791	BMS1	85	67.220	Nomascus_leucogenys
ENSCVAG00000008371	bms1	85	78.554	ENSOPRG00000005195	BMS1	77	79.467	Ochotona_princeps
ENSCVAG00000008371	bms1	96	68.008	ENSODEG00000005554	BMS1	85	68.944	Octodon_degus
ENSCVAG00000008371	bms1	100	79.950	ENSONIG00000007227	bms1	100	79.851	Oreochromis_niloticus
ENSCVAG00000008371	bms1	98	67.625	ENSOANG00000000662	-	80	75.663	Ornithorhynchus_anatinus
ENSCVAG00000008371	bms1	95	68.960	ENSOCUG00000005354	BMS1	85	69.453	Oryctolagus_cuniculus
ENSCVAG00000008371	bms1	99	80.400	ENSORLG00000014655	bms1	99	80.743	Oryzias_latipes
ENSCVAG00000008371	bms1	52	84.058	ENSORLG00020016246	bms1	99	77.640	Oryzias_latipes_hni
ENSCVAG00000008371	bms1	52	83.897	ENSORLG00015014183	bms1	99	78.760	Oryzias_latipes_hsok
ENSCVAG00000008371	bms1	99	81.537	ENSOMEG00000015042	bms1	99	81.218	Oryzias_melastigma
ENSCVAG00000008371	bms1	99	60.987	ENSOGAG00000006511	BMS1	85	68.659	Otolemur_garnettii
ENSCVAG00000008371	bms1	99	68.138	ENSOARG00000003900	BMS1	85	69.712	Ovis_aries
ENSCVAG00000008371	bms1	97	66.344	ENSPPAG00000027837	BMS1	79	75.121	Pan_paniscus
ENSCVAG00000008371	bms1	99	62.229	ENSPPRG00000001311	BMS1	85	68.810	Panthera_pardus
ENSCVAG00000008371	bms1	99	61.335	ENSPTIG00000009652	BMS1	85	66.828	Panthera_tigris_altaica
ENSCVAG00000008371	bms1	97	68.364	ENSPTRG00000002441	BMS1	80	75.121	Pan_troglodytes
ENSCVAG00000008371	bms1	97	77.866	ENSPKIG00000008165	bms1	85	77.920	Paramormyrops_kingsleyae
ENSCVAG00000008371	bms1	96	67.767	ENSPSIG00000006481	BMS1	84	69.391	Pelodiscus_sinensis
ENSCVAG00000008371	bms1	52	58.199	ENSPEMG00000022467	Bms1	84	67.983	Peromyscus_maniculatus_bairdii
ENSCVAG00000008371	bms1	99	66.817	ENSPCIG00000001339	BMS1	79	75.895	Phascolarctos_cinereus
ENSCVAG00000008371	bms1	96	87.762	ENSPFOG00000015180	bms1	99	84.615	Poecilia_formosa
ENSCVAG00000008371	bms1	99	86.695	ENSPMEG00000023176	bms1	94	85.941	Poecilia_mexicana
ENSCVAG00000008371	bms1	99	86.505	ENSPREG00000002695	bms1	99	86.085	Poecilia_reticulata
ENSCVAG00000008371	bms1	54	65.957	ENSPPYG00000002836	-	67	75.061	Pongo_abelii
ENSCVAG00000008371	bms1	73	76.712	ENSPCAG00000014528	BMS1	68	74.402	Procavia_capensis
ENSCVAG00000008371	bms1	94	66.167	ENSPCOG00000023834	-	80	72.938	Propithecus_coquereli
ENSCVAG00000008371	bms1	99	62.217	ENSPVAG00000000725	BMS1	85	68.233	Pteropus_vampyrus
ENSCVAG00000008371	bms1	100	78.460	ENSPNYG00000018866	bms1	100	77.641	Pundamilia_nyererei
ENSCVAG00000008371	bms1	54	78.694	ENSPNAG00000000676	bms1	87	79.968	Pygocentrus_nattereri
ENSCVAG00000008371	bms1	80	60.153	ENSRNOG00000006576	Bms1	82	69.689	Rattus_norvegicus
ENSCVAG00000008371	bms1	97	67.692	ENSRROG00000040101	BMS1	85	69.082	Rhinopithecus_roxellana
ENSCVAG00000008371	bms1	80	47.484	YPL217C	-	83	49.282	Saccharomyces_cerevisiae
ENSCVAG00000008371	bms1	52	69.181	ENSSBOG00000035778	BMS1	85	68.429	Saimiri_boliviensis_boliviensis
ENSCVAG00000008371	bms1	99	65.746	ENSSHAG00000005062	BMS1	78	76.627	Sarcophilus_harrisii
ENSCVAG00000008371	bms1	54	78.438	ENSSFOG00015022313	bms1	90	78.365	Scleropages_formosus
ENSCVAG00000008371	bms1	100	78.082	ENSSMAG00000019966	bms1	100	78.055	Scophthalmus_maximus
ENSCVAG00000008371	bms1	100	80.081	ENSSDUG00000016875	bms1	100	78.785	Seriola_dumerili
ENSCVAG00000008371	bms1	100	80.178	ENSSLDG00000015199	bms1	100	79.049	Seriola_lalandi_dorsalis
ENSCVAG00000008371	bms1	52	75.000	ENSSARG00000014407	BMS1	66	75.000	Sorex_araneus
ENSCVAG00000008371	bms1	99	67.994	ENSSPUG00000014454	BMS1	85	69.293	Sphenodon_punctatus
ENSCVAG00000008371	bms1	54	68.161	ENSSSCG00000010198	BMS1	85	69.726	Sus_scrofa
ENSCVAG00000008371	bms1	95	70.692	ENSTGUG00000006302	-	79	75.418	Taeniopygia_guttata
ENSCVAG00000008371	bms1	99	73.435	ENSTRUG00000008028	bms1	98	73.524	Takifugu_rubripes
ENSCVAG00000008371	bms1	98	74.116	ENSTNIG00000006216	bms1	87	75.080	Tetraodon_nigroviridis
ENSCVAG00000008371	bms1	65	70.234	ENSTBEG00000001673	-	63	68.667	Tupaia_belangeri
ENSCVAG00000008371	bms1	99	61.820	ENSTTRG00000007983	BMS1	77	80.541	Tursiops_truncatus
ENSCVAG00000008371	bms1	96	68.372	ENSUAMG00000023996	BMS1	85	69.417	Ursus_americanus
ENSCVAG00000008371	bms1	96	68.062	ENSUMAG00000016523	BMS1	85	69.094	Ursus_maritimus
ENSCVAG00000008371	bms1	79	73.053	ENSVPAG00000007477	BMS1	79	74.130	Vicugna_pacos
ENSCVAG00000008371	bms1	96	68.462	ENSVVUG00000021305	BMS1	87	68.498	Vulpes_vulpes
ENSCVAG00000008371	bms1	98	62.500	ENSXETG00000008158	bms1	87	65.800	Xenopus_tropicalis
ENSCVAG00000008371	bms1	99	84.043	ENSXCOG00000000506	bms1	94	92.947	Xiphophorus_couchianus
ENSCVAG00000008371	bms1	99	86.756	ENSXMAG00000014236	bms1	99	85.666	Xiphophorus_maculatus