EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000008501 (Gene tree)
Gene ID
107087087
Gene Symbol
-
Alias
-
Full Name
HMG box-containing protein 1-like
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
10393 bases
Position
chrKL652672.1:334898-345290
Accession
107087087
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000006896AXHPF08517.121.5e-3411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000004206-3304XM_015378451ENSCVAP00000006896487 (aa)XP_015233937UPI000742C41C
Gene Model
Click here to download ENSCVAG00000008501's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000008501's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000008501-9360.917ENSCVAG00000008930hbp19962.227
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000008501-9953.537ENSG00000105856HBP19762.500Homo_sapiens
ENSCVAG00000008501-9360.044ENSAPOG00000015816hbp19961.790Acanthochromis_polyacanthus
ENSCVAG00000008501-9952.874ENSAMEG00000013492HBP19952.874Ailuropoda_melanoleuca
ENSCVAG00000008501-9975.103ENSACIG00000019093-9674.897Amphilophus_citrinellus
ENSCVAG00000008501-9161.778ENSACIG00000018873hbp19063.111Amphilophus_citrinellus
ENSCVAG00000008501-9360.262ENSAOCG00000010889hbp19962.009Amphiprion_ocellaris
ENSCVAG00000008501-9975.937ENSAOCG00000001429-9977.318Amphiprion_ocellaris
ENSCVAG00000008501-9360.262ENSAPEG00000002330hbp19962.009Amphiprion_percula
ENSCVAG00000008501-9976.634ENSAPEG00000022589-9977.228Amphiprion_percula
ENSCVAG00000008501-9975.654ENSATEG00000003902-9877.021Anabas_testudineus
ENSCVAG00000008501-9360.262ENSATEG00000016411hbp19961.572Anabas_testudineus
ENSCVAG00000008501-9951.243ENSAPLG00000007110HBP19951.434Anas_platyrhynchos
ENSCVAG00000008501-9953.077ENSACAG00000015023HBP19953.077Anolis_carolinensis
ENSCVAG00000008501-9953.612ENSANAG00000022302HBP19463.855Aotus_nancymaae
ENSCVAG00000008501-9460.215ENSACLG00000004758hbp19661.505Astatotilapia_calliptera
ENSCVAG00000008501-9975.446ENSACLG00000003606HBP110075.446Astatotilapia_calliptera
ENSCVAG00000008501-9961.414ENSAMXG00000017678hbp19761.414Astyanax_mexicanus
ENSCVAG00000008501-9953.654ENSBTAG00000005524HBP19853.654Bos_taurus
ENSCVAG00000008501-9953.422ENSCJAG00000016260HBP19563.855Callithrix_jacchus
ENSCVAG00000008501-9952.772ENSCAFG00000003939HBP19852.772Canis_familiaris
ENSCVAG00000008501-9952.772ENSCAFG00020023119HBP19852.772Canis_lupus_dingo
ENSCVAG00000008501-9953.462ENSCHIG00000024405HBP19953.462Capra_hircus
ENSCVAG00000008501-9954.095ENSTSYG00000010057HBP19953.131Carlito_syrichta
ENSCVAG00000008501-9953.179ENSCAPG00000017460HBP19953.179Cavia_aperea
ENSCVAG00000008501-9953.179ENSCPOG00000002375HBP19853.179Cavia_porcellus
ENSCVAG00000008501-9953.612ENSCCAG00000026359HBP19463.855Cebus_capucinus
ENSCVAG00000008501-9953.728ENSCATG00000021910HBP19953.640Cercocebus_atys
ENSCVAG00000008501-9952.964ENSCLAG00000005170HBP19953.257Chinchilla_lanigera
ENSCVAG00000008501-9953.728ENSCSAG00000011395HBP19853.640Chlorocebus_sabaeus
ENSCVAG00000008501-7080.000ENSCHOG00000006820HBP16980.000Choloepus_hoffmanni
ENSCVAG00000008501-9953.346ENSCPBG00000000954HBP19752.772Chrysemys_picta_bellii
ENSCVAG00000008501-9953.537ENSCANG00000022804HBP19953.448Colobus_angolensis_palliatus
ENSCVAG00000008501-9952.952ENSCGRG00001014437Hbp19852.863Cricetulus_griseus_chok1gshd
ENSCVAG00000008501-9952.952ENSCGRG00000013859Hbp19852.863Cricetulus_griseus_crigri
ENSCVAG00000008501-9261.404ENSCSEG00000003373hbp19862.719Cynoglossus_semilaevis
ENSCVAG00000008501-9961.350ENSDARG00000028517hbp110061.837Danio_rerio
ENSCVAG00000008501-9952.952ENSDNOG00000004405HBP19553.143Dasypus_novemcinctus
ENSCVAG00000008501-6948.077ENSDORG00000010576Hbp19747.934Dipodomys_ordii
ENSCVAG00000008501-9948.855ENSETEG00000018542HBP19948.757Echinops_telfairi
ENSCVAG00000008501-9144.906ENSEBUG00000016475hbp18444.906Eptatretus_burgeri
ENSCVAG00000008501-9953.257ENSEASG00005017469HBP19153.257Equus_asinus_asinus
ENSCVAG00000008501-9953.065ENSECAG00000020969HBP19853.065Equus_caballus
ENSCVAG00000008501-9362.313ENSELUG00000006967hbp19962.313Esox_lucius
ENSCVAG00000008501-10061.569ENSELUG00000017031-9361.368Esox_lucius
ENSCVAG00000008501-9953.065ENSFCAG00000005858HBP19153.065Felis_catus
ENSCVAG00000008501-9952.199ENSFALG00000010259HBP19752.008Ficedula_albicollis
ENSCVAG00000008501-9952.975ENSFDAG00000007897HBP19853.359Fukomys_damarensis
ENSCVAG00000008501-9360.262ENSFHEG00000008222hbp19962.009Fundulus_heteroclitus
ENSCVAG00000008501-10083.800ENSFHEG00000014389-10082.800Fundulus_heteroclitus
ENSCVAG00000008501-9359.341ENSGMOG00000013782hbp19960.659Gadus_morhua
ENSCVAG00000008501-9952.008ENSGALG00000008050HBP19752.008Gallus_gallus
ENSCVAG00000008501-9360.262ENSGAFG00000021976hbp19962.009Gambusia_affinis
ENSCVAG00000008501-10084.040ENSGAFG00000004651-10084.040Gambusia_affinis
ENSCVAG00000008501-9359.565ENSGACG00000010054hbp19961.087Gasterosteus_aculeatus
ENSCVAG00000008501-9473.176ENSGACG00000019192-9672.961Gasterosteus_aculeatus
ENSCVAG00000008501-9953.065ENSGAGG00000023042HBP19752.490Gopherus_agassizii
ENSCVAG00000008501-9953.346ENSGGOG00000007788HBP19464.372Gorilla_gorilla
ENSCVAG00000008501-9460.430ENSHBUG00000004967hbp19661.720Haplochromis_burtoni
ENSCVAG00000008501-9977.030ENSHBUG00000016198-10076.238Haplochromis_burtoni
ENSCVAG00000008501-9953.462ENSHGLG00000019188HBP19852.964Heterocephalus_glaber_female
ENSCVAG00000008501-9342.947ENSHGLG00100014672-9343.158Heterocephalus_glaber_male
ENSCVAG00000008501-9953.462ENSHGLG00100001912HBP19852.964Heterocephalus_glaber_male
ENSCVAG00000008501-9259.823ENSHCOG00000011877hbp19961.148Hippocampus_comes
ENSCVAG00000008501-9962.475ENSHCOG00000010740-9562.880Hippocampus_comes
ENSCVAG00000008501-9959.155ENSIPUG00000023044hbp19759.719Ictalurus_punctatus
ENSCVAG00000008501-9953.422ENSSTOG00000013846HBP19853.333Ictidomys_tridecemlineatus
ENSCVAG00000008501-9953.422ENSJJAG00000015341Hbp19853.333Jaculus_jaculus
ENSCVAG00000008501-9474.946ENSKMAG00000000266-9573.876Kryptolebias_marmoratus
ENSCVAG00000008501-9360.262ENSKMAG00000003132hbp19960.917Kryptolebias_marmoratus
ENSCVAG00000008501-9971.515ENSLBEG00000023959-10072.121Labrus_bergylta
ENSCVAG00000008501-9360.480ENSLBEG00000012078hbp19962.227Labrus_bergylta
ENSCVAG00000008501-9953.654ENSLACG00000009119HBP19753.143Latimeria_chalumnae
ENSCVAG00000008501-9957.977ENSLOCG00000015822hbp19858.366Lepisosteus_oculatus
ENSCVAG00000008501-9952.182ENSLAFG00000005317HBP19952.182Loxodonta_africana
ENSCVAG00000008501-9953.728ENSMFAG00000030375HBP19564.777Macaca_fascicularis
ENSCVAG00000008501-9953.640ENSMMUG00000015409HBP19660.177Macaca_mulatta
ENSCVAG00000008501-9952.250ENSMNEG00000037516HBP19952.165Macaca_nemestrina
ENSCVAG00000008501-9953.728ENSMLEG00000031993HBP19953.640Mandrillus_leucophaeus
ENSCVAG00000008501-9971.206ENSMAMG00000023588-10071.206Mastacembelus_armatus
ENSCVAG00000008501-9261.778ENSMAMG00000023227hbp19862.444Mastacembelus_armatus
ENSCVAG00000008501-9975.446ENSMZEG00005015065HBP110075.446Maylandia_zebra
ENSCVAG00000008501-9460.173ENSMZEG00005005999hbp18061.472Maylandia_zebra
ENSCVAG00000008501-9952.199ENSMGAG00000006880HBP19852.199Meleagris_gallopavo
ENSCVAG00000008501-9952.762ENSMAUG00000011449Hbp19852.672Mesocricetus_auratus
ENSCVAG00000008501-9952.964ENSMICG00000012858HBP19564.490Microcebus_murinus
ENSCVAG00000008501-9952.751ENSMOCG00000019227Hbp19852.662Microtus_ochrogaster
ENSCVAG00000008501-9475.216ENSMMOG00000010239-10074.784Mola_mola
ENSCVAG00000008501-9260.310ENSMMOG00000012207hbp19360.310Mola_mola
ENSCVAG00000008501-9952.692ENSMODG00000016376HBP18952.692Monodelphis_domestica
ENSCVAG00000008501-9360.475ENSMALG00000009884hbp19961.771Monopterus_albus
ENSCVAG00000008501-9571.036ENSMALG00000010834-9670.085Monopterus_albus
ENSCVAG00000008501-9952.390MGP_CAROLIEiJ_G0017683Hbp19852.672Mus_caroli
ENSCVAG00000008501-9952.390ENSMUSG00000002996Hbp19852.672Mus_musculus
ENSCVAG00000008501-9952.490MGP_PahariEiJ_G0029441Hbp19852.964Mus_pahari
ENSCVAG00000008501-9952.390MGP_SPRETEiJ_G0018525Hbp19852.672Mus_spretus
ENSCVAG00000008501-9952.863ENSMPUG00000018249HBP19852.863Mustela_putorius_furo
ENSCVAG00000008501-9953.537ENSMLUG00000012425HBP19853.728Myotis_lucifugus
ENSCVAG00000008501-9953.232ENSNGAG00000023485Hbp19852.952Nannospalax_galili
ENSCVAG00000008501-9976.634ENSNBRG00000017820-10076.634Neolamprologus_brichardi
ENSCVAG00000008501-9460.430ENSNBRG00000001405hbp19661.720Neolamprologus_brichardi
ENSCVAG00000008501-9953.728ENSNLEG00000008761HBP19464.372Nomascus_leucogenys
ENSCVAG00000008501-8949.145ENSMEUG00000011116HBP19049.145Notamacropus_eugenii
ENSCVAG00000008501-7080.000ENSOPRG00000005315HBP16980.000Ochotona_princeps
ENSCVAG00000008501-9953.155ENSODEG00000001327-9853.065Octodon_degus
ENSCVAG00000008501-9246.288ENSODEG00000000482-9445.415Octodon_degus
ENSCVAG00000008501-9939.243ENSODEG00000010517-9939.044Octodon_degus
ENSCVAG00000008501-9975.197ENSONIG00000011868-10074.803Oreochromis_niloticus
ENSCVAG00000008501-9361.135ENSONIG00000008523hbp19962.445Oreochromis_niloticus
ENSCVAG00000008501-9953.772ENSOANG00000003174HBP19953.385Ornithorhynchus_anatinus
ENSCVAG00000008501-9953.640ENSOCUG00000012758HBP19953.817Oryctolagus_cuniculus
ENSCVAG00000008501-9358.515ENSORLG00000004396hbp19960.262Oryzias_latipes
ENSCVAG00000008501-9973.948ENSORLG00000009474-9973.747Oryzias_latipes
ENSCVAG00000008501-9358.734ENSORLG00020000370hbp19960.044Oryzias_latipes_hni
ENSCVAG00000008501-9974.349ENSORLG00020004269-9974.148Oryzias_latipes_hni
ENSCVAG00000008501-9358.515ENSORLG00015006557hbp19960.262Oryzias_latipes_hsok
ENSCVAG00000008501-9359.389ENSOMEG00000012837hbp19961.354Oryzias_melastigma
ENSCVAG00000008501-9974.597ENSOMEG00000013045-9874.597Oryzias_melastigma
ENSCVAG00000008501-9953.077ENSOGAG00000013102HBP19952.682Otolemur_garnettii
ENSCVAG00000008501-9953.269ENSOARG00000005055HBP19853.269Ovis_aries
ENSCVAG00000008501-9953.537ENSPPAG00000042116HBP19464.372Pan_paniscus
ENSCVAG00000008501-9953.065ENSPPRG00000007240HBP19953.065Panthera_pardus
ENSCVAG00000008501-9951.341ENSPTIG00000002734HBP19951.341Panthera_tigris_altaica
ENSCVAG00000008501-9953.537ENSPTRG00000019575HBP19464.372Pan_troglodytes
ENSCVAG00000008501-9953.728ENSPANG00000024385HBP19564.777Papio_anubis
ENSCVAG00000008501-9960.243ENSPKIG00000016967hbp19861.055Paramormyrops_kingsleyae
ENSCVAG00000008501-9956.352ENSPKIG00000016269HBP19856.008Paramormyrops_kingsleyae
ENSCVAG00000008501-9953.346ENSPSIG00000012478HBP19253.346Pelodiscus_sinensis
ENSCVAG00000008501-9559.615ENSPMGG00000005789hbp19760.554Periophthalmus_magnuspinnatus
ENSCVAG00000008501-9466.161ENSPMGG00000008031-9665.591Periophthalmus_magnuspinnatus
ENSCVAG00000008501-9953.065ENSPEMG00000014801Hbp19852.975Peromyscus_maniculatus_bairdii
ENSCVAG00000008501-9848.297ENSPMAG00000002631hbp19947.515Petromyzon_marinus
ENSCVAG00000008501-9953.269ENSPCIG00000004275HBP18953.269Phascolarctos_cinereus
ENSCVAG00000008501-10084.337ENSPFOG00000012271-9783.300Poecilia_formosa
ENSCVAG00000008501-9360.262ENSPFOG00000003951hbp19962.009Poecilia_formosa
ENSCVAG00000008501-9360.262ENSPLAG00000003142hbp19962.009Poecilia_latipinna
ENSCVAG00000008501-9386.275ENSPLAG00000012669-9985.153Poecilia_latipinna
ENSCVAG00000008501-10084.538ENSPMEG00000015095-10083.501Poecilia_mexicana
ENSCVAG00000008501-9360.262ENSPMEG00000003800hbp19962.009Poecilia_mexicana
ENSCVAG00000008501-5886.620ENSPREG00000015242-8484.859Poecilia_reticulata
ENSCVAG00000008501-9359.825ENSPREG00000004000hbp19961.572Poecilia_reticulata
ENSCVAG00000008501-9953.551ENSPPYG00000017898HBP19753.448Pongo_abelii
ENSCVAG00000008501-9952.816ENSPCAG00000014060HBP110052.816Procavia_capensis
ENSCVAG00000008501-7459.530ENSPCOG00000015370HBP18759.424Propithecus_coquereli
ENSCVAG00000008501-9953.077ENSPVAG00000014543HBP19953.257Pteropus_vampyrus
ENSCVAG00000008501-9460.215ENSPNYG00000001079hbp19661.505Pundamilia_nyererei
ENSCVAG00000008501-9976.238ENSPNYG00000015063HBP110076.238Pundamilia_nyererei
ENSCVAG00000008501-9960.282ENSPNAG00000029977hbp19760.282Pygocentrus_nattereri
ENSCVAG00000008501-9951.830ENSRNOG00000008927Hbp19852.207Rattus_norvegicus
ENSCVAG00000008501-9947.379ENSRBIG00000042410HBP19947.379Rhinopithecus_bieti
ENSCVAG00000008501-9953.537ENSRROG00000036622HBP19564.372Rhinopithecus_roxellana
ENSCVAG00000008501-9953.612ENSSBOG00000023603HBP19165.126Saimiri_boliviensis_boliviensis
ENSCVAG00000008501-9952.885ENSSHAG00000010948HBP19852.885Sarcophilus_harrisii
ENSCVAG00000008501-9960.355ENSSFOG00015011155hbp110060.750Scleropages_formosus
ENSCVAG00000008501-9360.480ENSSMAG00000009892hbp19962.227Scophthalmus_maximus
ENSCVAG00000008501-9972.157ENSSMAG00000012631-9472.102Scophthalmus_maximus
ENSCVAG00000008501-9975.294ENSSDUG00000015387-9674.902Seriola_dumerili
ENSCVAG00000008501-9461.304ENSSDUG00000022273hbp19962.882Seriola_dumerili
ENSCVAG00000008501-9376.496ENSSLDG00000017324-9976.068Seriola_lalandi_dorsalis
ENSCVAG00000008501-9361.354ENSSLDG00000009669hbp19962.664Seriola_lalandi_dorsalis
ENSCVAG00000008501-8950.424ENSSARG00000007731HBP110050.636Sorex_araneus
ENSCVAG00000008501-9952.874ENSSPUG00000019157HBP19452.874Sphenodon_punctatus
ENSCVAG00000008501-9977.291ENSSPAG00000009193-9977.689Stegastes_partitus
ENSCVAG00000008501-9360.480ENSSPAG00000004739hbp19961.790Stegastes_partitus
ENSCVAG00000008501-9953.065ENSSSCG00000035673HBP19953.065Sus_scrofa
ENSCVAG00000008501-9951.810ENSTGUG00000003100HBP110051.619Taeniopygia_guttata
ENSCVAG00000008501-9265.227ENSTRUG00000011881-7864.286Takifugu_rubripes
ENSCVAG00000008501-9360.526ENSTRUG00000016990hbp19962.281Takifugu_rubripes
ENSCVAG00000008501-9360.832ENSTNIG00000016027hbp19862.582Tetraodon_nigroviridis
ENSCVAG00000008501-9264.271ENSTNIG00000002023-9364.066Tetraodon_nigroviridis
ENSCVAG00000008501-9946.304ENSTBEG00000007793HBP19946.004Tupaia_belangeri
ENSCVAG00000008501-9952.975ENSTTRG00000006826HBP19952.975Tursiops_truncatus
ENSCVAG00000008501-9953.448ENSUAMG00000005951HBP19853.448Ursus_americanus
ENSCVAG00000008501-9953.640ENSUMAG00000018257HBP19853.640Ursus_maritimus
ENSCVAG00000008501-7452.604ENSVPAG00000008629HBP19252.604Vicugna_pacos
ENSCVAG00000008501-9952.772ENSVVUG00000022009HBP19852.772Vulpes_vulpes
ENSCVAG00000008501-9954.143ENSXETG00000005922hbp19951.024Xenopus_tropicalis
ENSCVAG00000008501-9260.000ENSXCOG00000020795hbp19161.758Xiphophorus_couchianus
ENSCVAG00000008501-9360.917ENSXMAG00000016455hbp19962.227Xiphophorus_maculatus
ENSCVAG00000008501-10083.903ENSXMAG00000007586-10083.702Xiphophorus_maculatus

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